|
current user: public |
|
Query: [S] COG3592 Uncharacterized conserved protein, from VFDB |
. 10 . 20 . 30 . 40 . 50 . 60 . 70 . | |||||||
# | Score | Template | Links and tools | %id | First | MEEETLLEQGYRKYRGADVDIYFNTNICAHSGNCVKGNAELFNLDRKPWIMPDNVPKEEAKRVIHTCPSGALQYIEK | Last |
1 | -43.600 | PF06902.11; Q12YH8_METBU/78-141; Divergent 4Fe-4S mono-cluster | ali follow.. | 37 | 1 | .............YVGKYITIHRDRYVCSHVGHCIRNLPSVFKKGREPWADPDAADPEEIAKLIRTCPSGALSYTVN | 64 |
2 | -31.900 | PF13459.6; C7PVU8_CATAD/14-85; 4Fe-4S single cluster domain | ali follow.. | 14 | 1 | ....................VWIDHDLCTGDGICAQYAPDVFELDIDGVAPVPSDLVLAVIDSAKECPGECIHV... | 72 |
3 | -23.800 | PF13370.6; B7JZY6_CYAP8/18-72; 4Fe-4S single cluster domain of Ferredoxin I | ali follow.. | 14 | 3 | .........................STCIDCDTCRWMAPEVFYEVDGQSAPTGEIEQKKALQALLSCPTASIG.... | 54 |
4 | -13.100 | PF04015.12; B8E3B5_DICTD/41-314; Domain of unknown function (DUF362 topsan) | ali follow.. | 15 | 139 | ...........KQMQHAQFKPNPNPNLCIGCRRCVDHCPGALEMVDKKSKLTRPELCIGCGECAVVCPTSAIKILWN | 205 |
5 | -11.300 | PF14697.6; D7CUR2_TRURR/338-410; 4Fe-4S dicluster domain | ali follow.. | 11 | 1 | ....................ARIDPAKCIHCNLCFVACDATYAGPAKTQPVVREDDCVGCNLCSLVCPVDGC..... | 70 |
6 | -10.100 | PF05187.13; Q2KY29_BORA1/438-540; Electron transfer flavoprotein-ubiquinone oxidoreductase, 4Fe-4S | ali follow.. | 15 | 61 | ..............DHGADRLQINAQNCVHCKTCDI-----------------------------KDPKQNIVWV.. | 92 |
7 | -9.680 | PF13746.6; D0L1X5_HALNC/211-324; 4Fe-4S dicluster domain | ali follow.. | 11 | 52 | ..................ERHAAGTGDCIDCKLCVQVCPTGIDIRD-----GLQLACISCGLCIDACNEIMHKRGWP | 105 |
8 | -9.440 | PF13247.6; C6BUH5_DESAD/66-169; 4Fe-4S dicluster domain | ali follow.. | 12 | 32 | .............QDEKTGAVVMTDKAVIRKGESWELCPKKTGLWSKCDMCLDRVEMGMLPACVQSCPTGTMNFGDR | 104 |
9 | -8.750 | PF14428.6; C6W9F1_ACTMD/109-234; SCP1.201-like deaminase | ali follow.. | 12 | 63 | ...EIKLAAHMRRNDIEHATVVINNIPCPLVWGCENLIGVVLPEGSSLTVHGSNGYERTFTGGRKP-P......... | 126 |
10 | -7.590 | PF13237.6; D3QZB0_MAGIU/369-428; 4Fe-4S dicluster domain | ali follow.. | 10 | 1 | ..................MVNNGPETDCIRCGRCSQHCPMNLLPKRIMDTVKFQKYAALSATGVMNC.......... | 49 |
FFAS is supported by the NIH grant R01-GM087218-01
|
![]() ![]() ![]() ![]() ![]() ![]() |
Selected papers from Godzik Lab Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9. Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018. Li W, Pio F, Pawlowski K, Godzik A. Saturated BLAST: an automated multiple intermediate sequence search used to detect distant homology. Bioinformatics. 2000 Dec;16(12):1105-10. |