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Query: [U] COG3846 Type IV secretory pathway, TrbL components, from VFDB

Results of FFAS03 search in PfamA32U
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MKRIPVMPVLALALLLFAAQAQAQAPVDSVGLFDNILGRFHQVADTWSGEIVRYASWLFWSLALLSMVWTYGMMALRKADIQEFLAETIRFFAVMGFFWWLLINAPAMSTAIIDSLRQIAANATGLGNTLSPSGIVDIGFDITSKVIDDSSIRSPVNSAVGIIASTVILIVLALIGVNMLLLLVSGWLLSYGAVFLLGFGGGRWTSDIAISYYKTVIGLGMQLFAMILIIGIGKSFIDQYYAAVSTGAITMKALLVMLVASIVLLALVNKIPPMFASIVGGGGATAGIGNFGAGAAIAAAATGAAVAATAGSALAAGLSSAGGGVSALKAAFQSAQQNMASGGGSGSGSGSGGNSAGVSSGGSSSFMSAMGTTGRFAADMGTSLAKGVGQVAKDKAGSVIASAKERVADTTGGKVASAIRNSMDAASGQNDFKGDSLAGAAQRGSETAMNDEVAAFVNKGKQHELast
1 -61.000PF04610.14; Q5P933_AROAE/75-282; TrbL/VirB6 plasmid conjugal transfer protein  ali follow..  45  1..............................................................VVISMVWTFGMMALRKADIGEFFAELVKFTIFTGFFWWLLLNGPGFAMSIIDSLRNIGSVAAGISRDLTPSRPIDIAFDILVKAGKSYTVLSPIDNLSIFFTTLAILACMGVVAANVLLALVNAWVLAYAGIFVLGFGGSRWTSDIAINYFRAVTGIALKLMTMTLLIGVAVSVMDGYHADLQEGA-PLRELLVIFVVALVLAVLIHSI................................................................................................................................................................................................. 208
2 -12.600PF03363.13; EBNA5_EBVB9/331-504; Herpesvirus leader protein  ali follow..  4  2...................................................................................................................................................................................................................................................................................................GDRSEGPGPTRPGPPGIGPEGPLGQLLRRHRSPSPTRGGQEPRRVRRRVLVQQEEEVVSGSPSGPRGDRSEGPGPTRPGPPGIGPEGPLGQLLRRHRSPSPTRGGQEPRRVRRRVLVQQEEEVVSGSPSGPLRPRPRPPARSLREWLLRIRDHFEPPTVTTQRQSVYIEEEED 174
3 -12.400PF15822.5; A0A2I2Y506_GORGO/5-242; MAPK-interacting and spindle-stabilising protein-like  ali follow..  5  46...............................................................................................................................................................................................................................................................................PSGLPPSATPSTVPFGPAPTGMYPSVPPTGPPPGPPAPFPPSGPSCPPPGGPYPAPTVPGPGPTGPYPTPNMPFPELPRPYGAPTDPAAAGPLGPWGSMSSGPWAPGMGGQYPTPNMPYPSPGPYPAPPPPQAPGAAPPVPWGTVPPGAWGPPAPYPAPTGSYPTPGLYPTPSNPFQVPSGPSGAPPMPGGPH 238
4 -12.000PF15240.6; G3RTV7_GORGO/1-150; Proline-rich  ali follow..  6  3............................................................................................................................................................................................................................................................................................................................LILLSVALLALSSAESSSEDVSQEESLFLISGKPEGRHPQGGNQSQGPRPPPGKPQGPPPQGGNQSQGPPPHPGKPERPPPQGGNQSQGPPHRPGKPEGPPPQGGNKSRPQGPPPAGGNPQQPQAPPAGKPQGPPPPPQGGRPPRPAQ 150
5 -11.500PF16072.5; B4LSP3_DROVI/260-545; Domain of unknown function (DUF4813 topsan)  ali follow..  12  23..................................................................................................................................................................................................................................................................................AGQIPPGASYYPSGGVPHGATYYPQAPVAAVPAGATYLPAGAGLPPGATYYPQAPKSSSGLGLGTGLVAGALGGAILGHVLTPTQTRVVEHAPMSGGYGGGGGGGSNGGGEDKIIIINNGPPGSVTTTDAGSGTTVINAGGAQPAAPAAPAYQPAPAGAPAAAPAAAPAPVPSAPQTPLAPLTPSAAEGA 212
6 -11.400PF06121.14; I3N7Y4_ICTTR/15-202; Domain of Unknown Function (DUF959 topsan)  ali follow..  8  1.....................................................................................................................................................................................................................................................................................LLTCCLVPSWADLLTLDWLWSTDLADSRDTLVSQPQGSLPVQPAAAPATHVAPQDDPAEQRTAPASPRPPLENPKAAPSRAPGAPISAAASAAPAASPDTREENVAGVGAKILSIAQGIQSIVQLWNEATPTQSSAGSASAPTDPLTLAGPSGPPEESGTTLGPHRGAPGSLGTWTAESGTLAVPTQ 187
7 -11.400PF15512.6; F6U7T6_HORSE/381-555; Chromatin assembly factor complex 1 subunit p60, C-terminal  ali follow..  9  1........................................................................................................................................................................................................................................................................................GIPLKEKPVLSVRTPDTAKKTKSQTPQGSLPGPRLAEGTPTSRTQDPSSPGTPPPQVKQSPASTAAKDTPGTAPGARSSLPGSSEEKTLQPSSQNVKAHPSRRVTLNTLQAWSKTTPRRINLIPLKTDTPLNSVPNSIISTSATEEVQSEMPGDPQGSPPEPKRPRLSEHKEGPQ......... 175
8 -11.300PF12446.8; Q4E5X5_TRYCC/136-277; Protein of unknown function (DUF3682 topsan)  ali follow..  13  1.......................................................................................................................................................................................................................................................................................................................SAGDHGAGSVSSGSSEGPSAPPVAPPVASPAPPGTSGGPSASVDATVVDTSAGRSGGTAGSPGTNPSNTIGDSQTEDQTPAAEANDSSLPEGAAGTTSGTEHTRKEEEEEEEENEKQQQSDETQVQQQQQHEHPAESGEESA........... 142
9 -10.900PF15847.5; H9KWV3_CALJA/1-312; Major keratinocyte cell envelope protein  ali follow..  16  1......................................................................................................................................................................................................................................................................................MSYQKKQPTPQPPVGCVKTSGGGGGGGGGGGGGGGGGGGCGFFSGGGSSGGSGGSGCGYSGGGGSGCGGGSSGGGGGGGFGGCGGGSGGSVKYSGGGGSSGGGSGCFSSGGGGSSGGGSGCFSSGGGGSSGGGSGCFSSGGGGSSGGGSGCFSSGGSSGGSSGQAVQCQSYGGVSSGGSSGGGS.. 184
10 -10.900PF12300.8; RHLB_XANCP/377-551; ATP-dependent RNA helicase RhlB  ali follow..  11  3...................................................................................................................................................................................................................................................................................................KIPVEPVTTELLTPLPRTPRATVEGEEVDDDAGDSVGTIFREAREQRAADEARRGGGRSGPGGASRSGSGGGRRDGAGADGKPRPPRRKPRVEGEADPAAAPSETPVVVAAAAETPAVTAAEGERAPRKRRRRRNGRPVEGAEPVVASTPVPAPAAPRKPTQVVAKPVRAAAK 175
11 -10.600PF05934.11; CLCC1_RAT/3-541; Mid-1-related chloride channel (MCLC)  ali follow..  10  95................................................................................FRRYLNKILIEAGKLGL-AEILLTRQTL--LEIQKFLS--------GEEWKPGAL-----DALSDILTNFKSHD--YNVFMVLLCLLCIVALVATELWTYVRWHTQLKRVCIISFLVSLISWTYKDDPCQKYYELALAVTFTNFVTEPLKYIGKGTGEFIKALMKEIPVLLQIPVLVILALAVLGFCYGAGQSVPMLRHFRGPEREPPRALEPDDRRRQKELDYRFHGGAGDADFSYRGPAGSIEQGPYDKMHVCERDVLRQRQVNMRFPSGNKSPEVLRAFDLPDTEAQEHPEVVPSHKPSIVNTSLKETSELPRESTLAECSQCAKDGSGQVPSTAESSPIVEKAQLKTDSECRPHSTEAAAAAARGTDPVSSPCG...... 539
12 -10.600PF11235.8; H3B103_LATCH/224-387; Mediator complex subunit 25 synapsin 1  ali follow..  9  1..........................................................................................................................................................................................................................................................................................................GGGATSATQSKQVVPQAPPTVQSQTSLLSTPSQPSQLPPGSAQQVAPPGSLSAAQAAAKMAVEAANSQKPGLATRFFSSAVPNLSQHPNTSGVGPPFSQPPVPTMTPGPISKMPPSTASLIPMTSQASLLPQQQQSQQPSQPSQQPLQPGGVPPGPVNVPQPGA.. 164
13 -10.500PF15143.6; YI023_HUMAN/33-161; Domain of unknown function (DUF4575 topsan)  ali follow..  3  1................................................................................................................................................................................................................................................................................................................................................RGRGEGLALSPLLPGVPPPPAMGVPRDRGGRGAGSQSTPRGGCLLPPRLGSQQPAGEEGLVLSPRLAGDASPCCDGSPKSQGVKRGWLSVPTSRGVPPPPAIGVLIARGGRGAGSQSLPRGWSFTPLR 128
14 -10.500PF07117.11; H2MIM2_ORYLA/2-199; Protein of unknown function (DUF1373 topsan)  ali follow..  7  5..................................................................................................................................................................................................................................................................................ISCLLIGRISCLPQGGYDPSMFLYSGQAPSYEKPSAQSSGYSSPQGYYSAGTNTAGGSTDSTAPMWYSASYPEQEPAKPTYQRPAQSSGYGSYSGSGSQQSGSQGAQSGVPGSQHQVEQESWSSSSDDEEEPEFTPVSEEDQVYAFKSRSRYNQKRLLFSQFRYTPTEPRVPQEPVFPYPSKSHQGKGS. 193
15 -10.400PF05937.11; APC_HUMAN/2670-2843; EB-1 Binding Domain  ali follow..  5  2....................................................................................................................................................................................................................................................................................................SGRSPTGNTPPVIDSVSEKANPNIKDSKDNQAKQNVGNGSVPMRTVGLENRLNSFIQVDAPDQKGTEIKPGQNNPVPVSETNESSIVERTPFSSSSSSKHSSPSGTVAARVTPFNYNPSPRKSSADSTSARPSQIPTPVNNNTKKRDSKTDSTESSGTQSPKRHSGSYLVTS 173
16 -10.200PF08639.10; Q4WT42_ASPFU/290-812; DNA replication regulator SLD3  ali follow..  8  1..............................ELLDAIRQHYLQALYISKTSVAYFAKGPLARCRAA-----------STNTPKHLAEFYREAILAAKKM----LKYRETLPSTIRDVLLSTSKLGKNGLYPEEEGFIRKWWRDRALADNGVPAESSRDAELKKHIA------------DLRLRETQLQILLILETLAL----TRTKSKKKPQDLDVLLELHLRLCIWHAVSTDDTALAES-SFDSQTGKKIESDAVRDFCTEVIVPFYASRLPDRCKLITRKLGVSGAISPLAKQSSGTKKASRTEPGKPTERQSSQRHPRRSLQRVLTDQQTASQARPRSLGRSNTVPSQAGAKRESMEPLLPVLSVSARGGIQKPKRVENREVDLNAVARQHEAKLRKVQMLMEQKKELDAAINALRKPNRELVAKDIVEDAVKRASGGSSRKPKNPVRNPFGQGVQVMATP. 446
17 -10.200PF06566.11; G3T473_LOXAF/18-267; Chondroitin sulphate attachment domain  ali follow..  6  1...............................................................................................................................................................................................................................................................................................ARDASSAVEAEGPVKSVLAWEPRANDTRDGAAPSGTGEDETAWTAPADEQAAAGPRVGPEEALEASAAVTGASWLETDSPGLGAVTTEVGSGDAQALPATLPAPDEALGQSSVPPATPEAIRPPSSTPGNKPSPGPELPKESSLEIWLNLGGSTPGPHGLEPTYPFQGTLEPQPASD 177
18 -10.100PF12782.7; A1DWS9_STRPU/1-291; Invertebrate innate immunity transcript family  ali follow..  11  3......................................................................................................................................................................................................................................................................................VKVTLIVAIVAALAISAHAQRDFNERRGKENDTERGQGGFGGRPGGMQMGSPRQDGGQMGGRRFDGPESGAPQMEGRRQNGGPMGGRRFDGPRFGGSRPDGAGGRPFFGQGGRRGDGEEETDAAQQIGDGLGGRGQFDGHGRGHHGHRQGPPQDRPEEQPFGQRNESSDEDGRPHPRHHGRHHQHH 188
19 -9.900PF06614.11; F7FEE8_MACMU/67-238; Neuromodulin  ali follow..  9  6...........................................................................................................................................................................................................................................................................................................APVADGVEKKGEGTTATEAAPATGSKPDEPGKAGETPSEEKKGEGDAATEQAAPQAPASSEEKAGSAETESATKASTDNSPSSKAEDAPAKEEPKQADVPAAVTAAAATTPAAEDAAAKATAQPPTETGESSQAEENIEAVDETKPKESARQDEGKEEEPEADQE 170
20 -9.820PF16768.5; G1SMJ2_RABIT/2-292; Nucleoporin homology of Germinal-centre associated nuclear protein  ali follow..  10  40........................................................................................................................................................................................................................................................................................GQNNTLSGKNSGFSQASSFPAASGVSHSSSVQTLGFAQTSSAGLFSGLEHTPTFAATSGPSSSSVPANPGFSFKSSTNLEVFPSTSTFGPEGGELPGSGFGKTEFTFKPLENAVFRPILANESEPEKTQSQITSGFFTFSHPISSGPGGLAPFSFPPVTSSSTTNSNFTFSKPVNTNNSSSA.. 221
21 -9.780PF13836.6; H0YLA6_HUMAN/45-229; Domain of unknown function (DUF4195 topsan)  ali follow..  7  1.....................................................................................................................................................................................................................................................................................IFVGEISSSKPAISNILNRVNPSSYSRGLKNGALSRGITAAFKPTSQHYTNPTSNPVPASPINFHPESRSSDSSVIVQPFSKPGYITNSSRVVSNKSSELLFDLTQDTGLSHYQGGPTLSMAGMSESSFLSKRPSTSEVNNVNPKKPKPSESVSGANSSAVLPSVKSPSVTSSQAMLAKGTNTSS.. 185
22 -9.750PF05466.12; F6R3X8_HORSE/2-233; Brain acid soluble protein 1 (BASP1 protein)  ali follow..  10  1........................................................................................................................................................................................................................................................................................GGKLSKKKKGYNVNDEKAKDKDKKAEGAGTEEEGTPKENETQAAAETTEVKEGKEEKPEKDAQDAANKPEDKEGEKDADAAKEDAPKAEPEQTEGAAEGKPEPPKDAKDGEQEQAAASGPAAGGDAPKASEAEAPAEPAPTKVDDKSKEGGEPTKTEAPAAPAAQETKSDGAPASDSKPSSTEA 184
23 -9.750PF08549.10; E3Q6J3_COLGM/3-717; Fungal domain of unknown function (DUF1750 topsan)  ali follow..  8  501...............................................................................................................................................................................................................................................................................GSTHSGVMVGDSDIDMGGTAAGLLDEMHTGFSANSTPLNNFPTPQTHMSALNSTAGTPANANAPSPAPVPPTIPEETETQASAGASAGAAEDVTMGNTGSTKNTPATAPDHGTGSGEWVVVPKGGTSPDPGAGAATSTGATEGDEPKAAAKIPSAAGTPVETQTPGGFSSLGDLDSAGDAMASYGASMADGLD 693
24 -9.720PF17710.1; CI066_HUMAN/1-295; Family of unknown function (DUF5555 topsan)  ali follow..  9  21...............................................................................................................................................................................................................................................................................PATCKNLEGGAGEVVRGRDPRRLRTSRSTEILGEDLAGPSAGAAARPAAPPPQPREPGAPGLRRAPPRTRMDSSGLGPCSEAPLHTSAGLSGRNLRAAGGVLPVDLERERAALCARQSGHGPPAVRWLLGSRGAESGGLARRRVAAEHAQPSANLVCRSALETSAFPPSKPKSPRGRVRARSSDGRLRHPAWR 213
25 -9.700PF02948.15; F7CBF9_CALJA/21-192; Amelogenin  ali follow..  4  1...............................................................................................................................................................................................................................................................................PH---------------------PGHPGYINFSYEVLTPLKWYQSMIRPAYPSYGYEPMGGWLHHQIIPVLSQQHPPTHTLQPHHHIPVVPAQQPVVPQQPMMPVPGQHSMIPTQHHQPNLPPPAQQPFQPQTVQPQPHQPMQPQSPVHPMQPLPPQPPLPPMFPMQPLPPMLPDLPLEAWPATDKTKREEVD 172
26 -9.690PF03535.13; H9G7Z6_ANOCA/44-248; Paxillin family  ali follow..  9  6.............................................................................................................................................................................................................................................................................VPPPPSNEALNGTVNDPLDQWQPSIPKNIHQQPQSQSPVYSSSASGSRECVISPPRASEEEHVYSFPNKQKSAEPSPTLMSSSLGNNLSELDRLLLELNAVQHNPPSSYPADEAARTPSLPSGAGSHYSALENATSLNTQPTAPAKEKPKRNGGHGIEEVCPSVESLLDELESSVPSPVPAITVNQGEMSSPQRV 200
27 -9.640PF15677.5; H2NCC0_PONAB/1-152; Cell cycle exit and neuronal differentiation protein 1  ali follow..  9  2.........................................................................................................................................................................................................................................................................................................................ESRGKSASSPKPDTKVPQATTEAKVPPAADGKAPLTKSSKKEAPAEKQQPPAAPTTAPAKKTPAKADPALLNNHSNLKPAPTAPTVPSSPDATPEPKGPGDGAEEDEAASGGPGGRGPWSCENFNPLLVAGGVAVAAIALILGVAFLARKK 152
28 -9.620PF09595.10; VGLG_HMPVC/35-217; Metaviral_G glycoprotein  ali follow..  7  1......................................................................................................................................................................................................................................................................................LIGITTLSIALNIYLIINYTIQKTSSESEHHTSSPPTESNKEASTISTDNPDINPNSQHPTQQSTENPTLNPAASVSPSETEPASTPDTTNRLSSVDRSTAQPSESRTKTKPTVHTRNNPSTASSTQSPPRATTKAIRRATTFRMSSTGKRPTTTSVQSDSSTTTQNHEETGSANPQASVST.... 182
29 -9.600PF15762.5; G1P4D6_MYOLU/1-188; Domain of unknown function (DUF4691 topsan)  ali follow..  6  1.....................................................................................................................................................................................................................................................................................MASAGTERRPGAQEGTAEGTAEGPAQLSEAPRGHVQSSECPVMGDQGLVSAHEVCGTQGEDKRPTGPVSEPELQEERPKLEEERLKPEVEALEERGPRPMASVVRSSHGPKRKPVNLPGPSHQAHPRAEAELPQGLPLQREDLEGSQSEPSPSTKQHKKAKKRKSLAAPVLPAVASTASAPSETLG. 186
30 -9.550PF06346.12; M3YA74_MUSPF/617-776; Formin Homology Region 1  ali follow..  5  2................................................................................................................................................................................................................................................................................................................PPPPLPGHAYIPPPPPLPGSVGSSVPPLLPGEAGIPPPPPLPGGASIPPPPPLPGGASIPPPPPLPGATVISPPPPLAGSTGIPPPPPLPGSAGIPPPPPPLPGGAGMPPPPPPLPGGPGIPPPPPIPGGPGIPPPPPGMGMPPPPPFGFGVPAAPVLP. 160
31 -9.530PF17693.1; G3RR96_GORGO/1-232; Family of unknown function (DUF5539 topsan)  ali follow..  8  1.......................................................................................................................................................................................................................MVRIWTTIMIVLILLRIG--------------------------------------PNKSSLSGRQAPTQAQTSDLVPSLFPLGLWAPGFCTWSSPDEDRVWRKPVRGTGNRDSGTRRRLQDATKQDPRPGNDVASAETAGPPSPAGIRAQDRAPRHRRAPPARMPVAPAPSADGGERRARAGRADAEPGWGDPLFQQNPHRSRARRGPGRATAAGALHISTPPPEPLQERGGGLFHRTRSVYNGLELN 211
32 -9.480PF05349.12; H0ZJB4_TAEGU/37-208; GATA-type transcription activator, N-terminal  ali follow..  12  3.....................................................................................................................................................................................................................................................................................................QTLAISAAQGPTPYDGSPGGFMHSTPSSPVYVPTTRVGSMLPTLPYLQGSGAAQPSHPGGGHAVWSQPAAESPSYSSGGGSHPSGRFPYSPSPPVANGASREPGAYSNSLGARDQYSPLARPLNGSYPGPYTSYVGPQLAPAWPTAPFENSMLHCLQGRAAPIPVRAPSA. 172
33 -9.440PF12316.8; G3PRZ5_GASAC/498-683; Segment polarity protein dishevelled (Dsh) C terminal  ali follow..  10  3........................................................................................................................................................................................................................................................................................THLSLHEHDGSSGGASDQDTVPPLPHPGAAPWPITLPYQFPVLHPYDMQQPGHGGPGAGSAGSQNSVINIPSNSSKGSSGSNCSKNEGRKSGGSGSEPEIRSHRAPSERSAAPPSERSVRSSVSHRSAHSHSIAFGPGLVYGPPGLPPQPPLSTAAPGAPPGRELASVPPELTASRQS...... 180
34 -9.430PF15140.6; ERIC5_MOUSE/95-251; Domain of unknown function (DUF4573 topsan)  ali follow..  10  1...........................................................................................................................................................................................................................................................................................................................ATDHSRPTKKIEPLVQGGECEQPQPGGKDDMLGTEEVKKDVEARTEVPSLKGDAEIKPLRLSSERDSPGAPQAGTMKFLQTAENILPLETTQELPPKEATGKGAQPQILEAIPKENSSPEIEGIQSAESSGQQQLVEAPGEAEQPQALE 149
35 -9.420PF15231.6; F7IG15_CALJA/1-142; Variable charge X/Y family  ali follow..  9  2...................................................................................................................................................................................................................................................................................................................................APKKRASGPPAKAGETRKRKSSSEASPSTPKKKPQMPKEGKRGKAGPGGRGRKKRAAGEKMAAVGAPEAGSGPAPPGPSKPRSQELPPQELPPCQPVSEPDPLSQETQLEDPLNQETQLEEPLSDETQLEDPLRQETQLEE 142
36 -9.420PF04503.13; F7CLE9_XENTR/63-346; Single-stranded DNA binding protein, SSDP  ali follow..  8  88...............................................................................................................................................................................................................................................................................PNQGLGGVPGSQTLLPSGMDPSRQQGHPNMAGPMQRMSGPRGMVPLGPQSYGGGMRPPLNALGGPAMPGMNMGPGGGRPWPNPGNANSIPYSSASPGNYVGPPGGGGPPGTPIMPSPADSTNSGDNMYTLMNAVPPGGNRPNFPMGPGSDGPMSGLGGMEPHHINGSLGSGDMDSISKNSPNNMNLSNQPGT. 279
37 -9.350PF16599.5; W5N2F8_LEPOC/1164-1347; Unstructured linker region on PTN13 protein between PDZ  ali follow..  9  10...................................................................................................................................................................................................................................................................................................STSTFQLKNQSRARSPGQRQKQDDESSSEEHNRAPSCSRPASGGSATVSLSRQNGSMSSQDSRTESASLSQTIINGFHKKQVPDGAAPLPSCHPENAVTSDTPAPALPPKTWKGRIPEIVKDQYDSDRGDSDMDEDTCSSSQEKQMSKGLSPSSSMEKLSGNAQGVNDLKPGD 182
38 -9.340PF15356.6; G5C3D2_HETGA/23-136; Psoriasis susceptibility locus 2  ali follow..  5  1..............................................................................................................................................................................................................................................................................................................................................................SEDHSSPPSTEAREEESPPRLPLGPPIPGEPWPGAPPLFEDPPPPGPSHPWGDLPDSGVWPPEAPSTDPPQPPLPDDPWPAGPQPPANPWPPAPEVDHKPHNEPDLDPPREEYR 114
39 -9.340PF03035.14; Q917X0_9CALI/1-251; Calicivirus putative RNA polymerase/capsid protein  ali follow..  8  1.................................................................................................................................................................................................................................................................MAGAFIAGLAGDVLSNGLGSLINAGANAILSAQIQATKQLQADMIAIKQGVLAAGGFSPTDAARGAVNAPMTQALDWSGTRYWAPGSMKTTSYSGKFVSMNPVRQVEFPQPKKSAAIPSSASSVSSGRTNLTNSTQSTVVSTSSAPPSRGSSAPSTLSRATTRTSNWVEEQNRNLEPYMRGALQTTFVTPPSSRASSNGTVSTVPKG 230
40 -9.230PF12526.8; Q8JJN7_HEV/686-799; Protein of unknown function (DUF3729 topsan)  ali follow..  8  5..........................................................................................................................................................................................................................................................................................................................................................................STNPFCGESTLYTRTWSVSGFSSCFSPLEPPASGSLPPAEIDPPVTVDAPSPSILALPRPSVFEQTTPPLDPAGDAAASAPPGAPGVPPAPARPVTHPSGP. 105
41 -9.190PF16601.5; H0XAD4_OTOGA/548-737; Rabosyn-5 repeating NPF sequence-motif  ali follow..  9  1...........................................................................................................................................................................................................................................................................................SLDFREIRPFQLQAGREPRTHLAYALDLGSSPVQSSTAPKTPSPCSAQEPVQIWSGPPVLGQEFLPQSSISQQDEVPSLNPFDEEDFSSPTEEATASAPATELSSGPSAYIPKVYNPFEEEEEEEAAPFTHPDSPVPNPFDEEDEHPHPRSSSPLVPGNPFEEPTCTNPFEVDSDSGPEAE 181
42 -9.180PF17532.2; A0A0C7T7K4_EBVG/1-148; Family of unknown function (DUF5451 topsan)  ali follow..  7  5....................................................................................................................................................................................................................................................................................................................................VRQRPAQAPPAKRQALETVPHPQNRGRLMSPKARPPRMQRRPRPPVAKRRRFPRSPQQVERPILPPVESTPQDMEPGQVQSPPQITGMIQLCQDRYTMRPPIYLPALLANCGPAGLLRAHRLPQPKPPCQSRQRPSPDSQ 144
43 -9.080PF12429.8; Q4CVZ4_TRYCC/733-962; Protein of unknown function (DUF3676 topsan)  ali follow..  8  37...............................................................................................................................................................................................................................................................................LLLAASSSKADAGSSVPESATAAQSAENSHQEDNAQFHQGKTAQQFTLNEAKESMQRDSDVQPQDPQPAELTEVTDVEMSPESNDTEQPEEEGEANDRSDGTTSPVASSLIMETVTGPADGEHQVQQSTELSAENDDVRSTGTGTTGAEQSLSLEAGDGSSERTMGSGSSPTPSKSGAETKSAENTDNISWSE 229
44 -9.020PF06933.11; O44418_CHIPA/1-756; Special lobe-specific silk protein SSP160  ali follow..  11  3.......................................................................................................................................................................................IKVILVCALVAIFFA------------------VAEGGPIFVISLLFSLFEVMVSVVFDVKSFTSLSTPTC---------------TVPSFATR-VGGGRFSGIITASFNMIAMISANVQAIQSGSGSTSGSSSSSTTSTSNSTTTTSNSTTTTTNSTTSSNSTSSGLTSSASVVSLIDTIAWVYQDSSVGIAYLMVSILALFYGQSVSAPPYPDLGIPALPANCSGPGVPQSVQIRAAIAYVNITIYFINMTGQQFEDLQGPVATDCGCPNTTSVAPL.. 255
FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Jaroszewski L, Slabinski L, Wooley J, Deacon AM, Lesley SA, Wilson IA, Godzik A. Genome pool strategy for structural coverage of protein families. Structure. 2008 Nov 12;16(11):1659-67.