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Query: [S] COG5501 Predicted secreted protein, from VFDB

Results of FFAS03 search in PfamA32U
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MKLILALIPVTLTASLALAEPEKPNNPLADGTTWRDLKGDVVGEAAILDGSALFSVTAPYRANDAATVPVTIEQTDAAADPIESLKLVIDENPAPVAAEIRFGPAMAPLKFETRVRVNQYSNIRAIAETPRGIFMHGRFVKASGGCSAPATKDPVAALKDMGEMRLKLFGGKGEVQKARREAQIMIRHPNYSGLQRDQITQLFVSAKFITELVVKQGDELLFALDGGISISENPVFRFSYTDNGAPDFTVHAVDTDGNVFDRVLPKTPPALast
1 -46.500PF13501.6; Q6NA19_RHOPA/44-154; Sulfur oxidation protein SoxY  ali follow..  24  1.....................................IRDLIGNATPR--DGGIALQVPETAENGAVVPVTVVVPMTTERYVRAIHLVATKNPTPGIASFRLSPASGRAQVSMRIRLAEKQMLLVFAEHSDGVNRAAAEIKVSVGGC........................................................................................................................... 111
2 -44.700PF08770.11; B8GSV5_THISH/6-100; Sulphur oxidation protein SoxZ  ali follow..  20  2...........................................................................................................................................................................RAQLAGDTTTVRALMSHPMETGQRKNK-AGEPIPAHYIKEVVAEVKGKNVLTAYWGPAISRNPYLSFQFTGAAAGDLKISWVDNKGEADSTEVQ..... 95
3 -11.000PF01880.18; SOR_THEKO/9-111; Desulfoferrodoxin  ali follow..  10  1.................................................GDWKGEKHVPEYEKEGDLVKVEVSVPNTPEHHIAWIQLWFHPEDGGKVEFSNHTDPLTEPRAVFFFRTQKKGKLYALSYCNHGLWENE..................................................................................................................................... 103
4 -6.320PF17992.1; I3ICT4_9GAMM/31-225; Agarase CBM like domain  ali follow..  9  15..................................NATGTLVNSQSAAGAESSALKVKFNSAAHEYTSVLIKPQAPSWDWSDLGEISVAFDTNPGEHSVQLFLDQDTHGTSFTRSVSVPVGTSRVYYAKLSGHDMVSANPDSKVELNAASGLRGNPPTWEGDDVQFIWMWGVMNLDVASIQQISLSVQYALHDK------------EIILDNIRVIKNPP................................................... 189
5 -6.100PF16398.5; Q8AB40_BACTN/5-289; Domain of unknown function (DUF5007 topsan)  ali follow..  11  4...............................................................GNSTLPLTFEISRIVRAD-KSIEEIEAKREIEYRTLFQVKKHSG------EFMMWSNAESSFVQCAPSDGYIFDVLVKNSGG-------------------------YKTFTDMQLIPVRESDYEPSIYDPETGLVQGQDYVTPNSLTLFQTESGDYMFPEDVHIYFRE-----NQDNDDDVKSLTFRFYGPDYTPISPS....... 190
6 -5.960PF06650.12; Q0CQW1_ASPTN/2239-2520; SHR-binding domain of vacuolar-sorting associated protein 13  ali follow..  9  2....................................................KVSIYSPYLILNKTGLPMEIQSKAFLQSAAAGQGIRADSRSGGKALPYMYSYHTDDPKNRSILRIGGSA------------WSKPQSFEAIGS----------------------TFEVVLPDKNGKCEFHSGVSVAEGQGKYKLTKVVTLAPRFVLKNILVREPGS-----SNVLTLKSGELAPLHFLRQVAEKQLCLCFPGVNNQWSSPFNIADIG 187
7 -5.840PF17735.1; Q62P74_BACLD/48-168; Biofilm surface layer A  ali follow..  16  53......................................................ALTTGQILNNGKTVRLPLTIDLLGI---AEFKLVLANKTLPAAGKYTFRAENRVLGLGSTFYAESSIEVQ.................................................................................................................................................. 119
8 -5.610PF06525.11; SOXE_SULAC/49-198; Sulfocyanin (SoxE) domain  ali follow..  9  1....................................................................PSKISIPYSSSNKTVFLTIVVESSSNVNQFNFN-----GTSSGSLVIYIPAGSTVIVKFINQESLPHNLVLLQNSTPTPQSPEISSDGKIIDIVGATTSNYDVNGISGGASAEGVWGPISAAASGMW---SNNVTAPYAVI............................................................. 150
9 -5.540PF14463.6; C5ATD5_METEA/1-151; E1 N-terminal domain  ali follow..  11  5........................................................................................AQENARMLAAILGSDEDDASERLNRAVLVTAPPGGADAAWAAEVAALLARTVGVVTSPAEEA--------------QLELVIGEAAARTDLPRLHAAIDAGGATDVRPVGRTGGPPPHPLLAAVAACPAAAATLRMLLDDPALPAVAYPLRLDFDQLG........................ 149
10 -5.530PF01687.17; E6W740_DESIS/184-305; Riboflavin kinase  ali follow..  15  2................................................................................................................................................................................GRPYCLSGTVVEGDMRGKKIGFPTANLLPPTGVYATVARVGNKSFVAL---TNIGYNPTFV----ERRVVSVETHILDFSRNLYGFPLELL... 91
FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Jaroszewski L, Rychlewski L, Godzik A. Improving the quality of twilight-zone alignments. Protein Sci. 2000 Aug;9(8):1487-96.