current user: public
If you have questions about the server, please let us know.

Query: [R] KOG4095 Uncharacterized conserved protein (tumor-specific protein BCL7 in humans), from VFDB

Results of FFAS03 search in PfamA32U
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
    .   10    .   20    .   30    .   40    .   50    .   60    .   70    .   80    .   90    .  100    .  110    .  120    .  130    .  140    .  150    .  160    .  170    .  180    .  190    .  200
# Score Template Links and tools%idFirst MSGRSVRAETRSRAKDDIKKVMAAIEKVRKWEKKWVTVGDTSLRIFKWVPVTDSKEKEKSKSNSSAAREPNGFPSDASANSSLLLEFQDENSNQSSVSDVYQLKVDSSTNSSPSPQQSESLSPAHTSDFRTDDSQPPTLGQEILEEPSLPSSEVADEPPTLTKEEPVPLETQVVEEEEDSGAPPLKRFCVDQPTVPQTASESLast
1 -34.500PF04714.13; H3F6S1_PRIPA/4-52; BCL7, N-terminal conserver region  ali follow..  65  1..SRSHRAETRNSRKDELRKVIYSIEKVRKWEKRWVLLKDTSMRIHKWVPV....................................................................................................................................................... 49
2 -10.200PF05934.11; CLCC1_RAT/3-541; Mid-1-related chloride channel (MCLC)  ali follow..  5  396....................................................FSYRGPAGSIEQGPYDKMHVCERDVLRQRQVNMRFPSGNKSPEVLRAFDLPDTEAQEHPEVVPSHKPSIVNTSLKETSELPRESTLAECSQCAKDGSGQVPSTAESSPIVEKAQLKTDSECRPHSTEAAAAAARGTDPVSSPC....... 538
3 -10.100PF14963.6; H3DF96_TETNG/13-269; Calcium signal-modulating cyclophilin ligand  ali follow..  13  1.SAAQKRAEIRRR------KLLMNSEE----------------RMNRIVGCTTNSSENHEPRFHLDLDRTEPVSSSSSPKRSSAHGSRSHSATPERRASPLPGFSESLGGSLEDDLAGIRKRTRGDRVSDDLNSSARPGLQKYLSRFDDAMKLRGQLASEKPVQDR.................................... 143
4 -9.270PF05609.12; G1QDE7_MYOLU/26-480; Lamina-associated polypeptide 1C (LAP1C)  ali follow..  4  1....................................................KDLENDPSINSQAQETTVTASTTKEAQILSPASGLNKDHQEVETIGSGSADTSNQSESPDEASYGNYPKDKTELKTNQSFQDGKLGHQLSSKKSGGEESLHPEPSCCPSEEVGRADAQLGSSSVDLPEEASNRPEASQKPLAVDPQGVRG 150
5 -8.950PF15724.5; L5JX75_PTEAL/24-275; TMEM119 family  ali follow..  10  97...............................KHKASAYYPSSFPKKKYVDQNDRAGGPQAFSEVPDKDPDGRPEEALDSSQQLQADILAATQNLKSPARVASSSGNGARVTEGKSEEEEKGSQEADREAEGRGVSVERAEVAEDPCLAVVEGAVGAGEGPGEPEAAPSLSQEAEGPAGPPESP................... 248
6 -8.920PF11200.8; A7AQJ9_BABBO/2-370; Protein of unknown function (DUF2981 topsan)  ali follow..  7  164.................................................DNIPSKNLRMPQTEEMPINQHVGNDLNMPGNGAMPISGNIDAVTGNLEPASKAIQQTTPNVNESMKIPNEMPMPYGNSKEAKSAELPIAIPEQTVAKNTYDAKTETFYDRLPLVPHIGETEGEAEEVSKDELPPETHDLTPEGVSEVVAIYK. 315
7 -8.740PF08192.11; SSY5_YEAST/2-693; Peptidase family S64  ali follow..  13  1..........................................VRFF----LNKKKNEEKENTDLPADNEQNAAETSSSNVSGNEERIDPNSHDTNPENANNDDASTTFGSSIQSSSIFSRGRMTYGTGASSSMATSEMRSHSSGHSGSKNSKNLQGFKDVGKPLRAVSFLSPVKEEESQDTQNTLDVSSSTSSTLATSENAR 157
8 -8.460PF05460.13; Q75D89_ASHGO/10-395; Origin recognition complex subunit 6 (ORC6)  ali follow..  10  27.TTATLYNVSLNKVPEEIARAYLAAEKLSE------KYEPELQYYREKIPLEPRKTVQTLWTSSPVRNLNLSPSPKKDGGRLSARDPVELRAELFGTPVKRAGAVTLPGAGELSPTKQLSPSKPMSPVKPSPRRRLAFEDEDEDYEPDASPQPSPRRSIFPGGFEPDPDESEFDSPTKSPFKSPTRSPTKSAQSSPRK.... 232
9 -7.980PF05297.11; LMP1_EBVB9/1-386; Herpesvirus latent membrane protein 1 (LMP1)  ali follow..  10  150................DLILLIIALYLQQNWDLLWLLLFLAILIWMYYHGQRHSDEHHHDDSLPHPQQATDDSGHESDSNSNEGRHHLLVSGAGDGPPLCSQNLGAPGGGPDNGPQDPDNTDDNGPQDPDNTDDNGPHDPLPQDPDNTDDNGPQDPDNTDDNGPHDPLPHSPSDSAGNDGGPPQLTEEVENKGGDQGPPLMT 340
10 -7.930PF08690.10; G3ATM9_SPAPN/9-310; GET complex subunit GET2  ali follow..  7  1........ELTEAEKRQLLR--------ERRKAK-MAKGQASDRLNNILSQGSSVKTNVKSVLDEEESVAKATSPSLSNEEDDPEIQDITSIAMQPPISPTPPIGEGTPEDIDAIFNKIFQQQQQQSGDFKEGDGNDPMANLMKMFSEGVPEPGLSRATTEKPFDQDPAIAKYQMELYEYQQYQHKL............... 170
FFAS is supported by the NIH grant R01-GM087218-01
1 4 8 3 4 1   jobs submitted since Jan 1, 2011
Comments and questions to: webmaster
Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Jaroszewski L, Slabinski L, Wooley J, Deacon AM, Lesley SA, Wilson IA, Godzik A. Genome pool strategy for structural coverage of protein families. Structure. 2008 Nov 12;16(11):1659-67.