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Query: [P] COG1528 Ferritin-like protein, from VFDB

Results of FFAS03 search in SCOP207
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MLSQAIAEKLNEQINLEFYSSNVYLQMSAWCAHHGYEGAAAFLLRHADEEMEHMQKLFNYVSETSGMPLLGKIEAPKNDYKTLKEIFEITLEHEKFVTSKINELVEVTFAHKDYSTFNFLQWYVAEQHEEEMLFNSIIDKFNLLGEDGRSLYFIDRDLATLLast
1 -88.400d3bvfa1 a.25.1.1 (A:1-166) automated matches {Helicobacter pylori [TaxId: 210]}  ali model 3D-neighbors follow..  45  1MLSKDIIKLLNEQVNKEMNSSNLYMSMSSWCYTHSLDGAGLFLFDHAAEEYEHAKKLIIFLNENNVPVQLTSISAPEHKFEGLTQIFQKAYEHEQHISESINNIVDHAIKSKDHATFNFLQWYVAEQHEEEVLFKDILDKIELIGNENHGLYLADQYVKG. 160
2 -87.600d1s3qa1 a.25.1.1 (A:3-164) Non-hem ferritin {Archaeoglobus fulgidus [TaxId: 2234]}  ali model 3D-neighbors follow..  41  2.ISEKMVEALNRQINAEIYSAYLYLSMASYFDSIGLKGFSNWMRVQWQEELMHAMKMFDFVSERGGRVKLYAVEEPPSEWDSPLAAFEHVYEHEVNVTKRIHELVEMAMQEKDFATYNFLQWYVAEQVEEEASALDIVEKLRLIGEDKRALLFLDKELSL. 160
3 -83.600d4iwka_ a.25.1.1 (A:) Non-hem ferritin {Pseudo-nitzschia multiseries [TaxId: 37319]}  ali model 3D-neighbors follow..  25  1..SEELLDLFNRQVTQEFTASQVYLSASIWFDQNDWEGMAAYMLAESAEEREHGLGFVDFANKRNIPIELQAVPAPCAEWSSPEDVWQSILELEQANTRSLLNLAEAASTCHDFAVMAFLNPFHLQQVNEEDKIGSILAKVTDENRTPGLLRSLDVVS... 158
4 -81.200d3oj5a_ a.25.1.0 (A:) automated matches {Mycobacterium tuberculosis [TaxId: 419947]}  ali model 3D-neighbors follow..  20  1..KTKFHALMQEQIHNEFTAAQQYVAIAVYFDSEDLPQLAKHFYSQAVEERNHAMMLVQHLLDRDLRVEIPGVDTVRNQFDRPREALALALDQERTVTDQVGRLTAVARDEGDFLGEQFMQWFLQEQIEEVALMATLVRVADRAGA---NLFELENFVAR. 155
5 -72.100d3a68a_ a.25.1.0 (A:) automated matches {Soybean (Glycine max) [TaxId: 3847]}  ali model 3D-neighbors follow..  27  28.YVDESESAVNEQINVEYNVSYVYHAMFAYFDRDALRGLAKFFKESSEEEREHAEKLMEYQNKRGGKVKLQSIVMPLSDKGDALHAMELALSLEKLTNEKLLNLHSVATKNGDVQLADFVEEYLGEQVEAIKRISEYVAQLRRVGK-GHGVWHFDQMLLH. 193
6 -71.500d1z6om1 a.25.1.1 (M:1-191) (Apo)ferritin {Cabbage looper (Trichoplusia ni), H chain [TaxId: 7111]}  ali model 3D-neighbors follow..  19  17.MHRSCRNSMRQQIQMEVGASLQYLAMGAHFSKDNRPGFAQLFFDAASEEREHAMKLIEYLLMRGELTNDVSSLLQRSSWKGGVEALEHALSMESDVTKSIRNVIKACEDDSEFNDYHLVDYFLEEQYKGQRDLAGKASTLKKLMDRALGEFIFDKKLLG. 188
7 -71.300d2v2pa_ a.25.1.1 (A:) automated matches {Horse (Equus caballus) [TaxId: 9796]}  ali model 3D-neighbors follow..  18  7.YSTEVEAAVNRLVNLYLRASYTYLSLGFYFDRDALEGVCHFFRQLAQQKMQGAERLLKMQNQRGGRALFQDLQKPSQEWGTTPDAMKAAIVLEKSLNQALLDLHALGSAQADPHLCDFLEHFLDEEVKLIKKMGDHLTNIQRLVGSGLGEYLFERLT... 169
8 -65.800d1z6oa1 a.25.1.1 (A:13-212) (Apo)ferritin {Cabbage looper (Trichoplusia ni), L chain [TaxId: 7111]}  ali model 3D-neighbors follow..  13  21.SHGNVATELQAYAKLHLERSYDYLLSAAYFNNYNRAGFSKLFKKLSDEAWSKTIDIIKHVTKRGDKMNFDQHSTMKTEENHELEALAKALDTQKELAERAFYIHREATRNSDPEIAQYLEEFIEDHAEKIRTLAGHTSDLKKFIDLSLALYVFDEYLQK. 198
9 -51.800d3b3hb_ a.25.1.0 (B:) automated matches {Mycobacterium smegmatis [TaxId: 246196]}  ali model 3D-neighbors follow..  19  4..DPDVLKLLNEQLTSELTAINQYFLHSKMQDNWGFTELAEHTRAESFEEMRHAETITDRILLLDGLPNYQRLF-SLRVGQTLREQFEADLAIEYEVLERLKPGIVLCREKQDATSARLLEQILADEETHIDYLETQLQLMDKLGDALYAAQCVSRPPGS. 160
10 -51.500d4cvra_ a.25.1.1 (A:) automated matches {Escherichia coli [TaxId: 562]}  ali model 3D-neighbors follow..  14  4..DTKVINYLNKLLGNELVAINQFFLHARMFKNWGLKRLNDVEYRESIDEMKHADRYIERILFLEGLPNLQDLG-KLNIGEDVEEMLRSDLALELDGAKNLREAIGYADSVRDYVSRDMMIEILRDEEGHIDWLETELDLIQKMGLQNYLQAQIRE..... 156
11 -48.700d1nf4a_ a.25.1.1 (A:) Bacterioferritin (cytochrome b1) {Desulfovibrio desulfuricans [TaxId: 876]}  ali model 3D-neighbors follow..  16  6..KAKVIEVLNKARAMELHAIHQYMNQHYSLDDMDYGELAANMKLIAIDEMRHAENFAERIKELGGEPTTQKEGKVV-TGQAVPVIYESDADQEDATIEAYSQFLKVCKEQGDIVTARLFERIIEEEQAHLTYYENIGSHIKNLGDTYLAKIAGTPSSTG. 162
12 -40.400d1lkoa1 a.25.1.1 (A:2-147) Rubrerythrin, N-terminal domain {Desulfovibrio vulgaris [TaxId: 881]}  ali model 3D-neighbors follow..  10  3LKGSRTEKNILTAFAGESQARNRYNYFGGQAKKDGFVQISDIFAETADQEREHAKRLFKFLEGGDLEIVAAF--PAGIIADTHANLIASAAGEHHEYTEMYPSFARIAREEGYEEIARVFASIAVAEEFHEKRFLDFARNIKE.................. 143
13 -39.700d1j30a_ a.25.1.1 (A:) Hypothetical rubrerythrin {Sulfolobus tokodaii [TaxId: 111955]}  ali model 3D-neighbors follow..  12  2LKGTKTAENLKQGFIGESMANRRYLYFAKRADEEGYPEIAGLLRSIAEGETAHAFGHLDFIRQGGLTDPATDKPIGT----LEQMIESAIAGETYEWTQMYPGFAKVAREEGFPEVAEWFETLARAEKSHAEKFQNVLKQLK................... 139
14 -35.900d1yuza1 a.25.1.1 (A:23-157) Nigerythrin, N-terminal domain {Desulfovibrio vulgaris [TaxId: 881]}  ali model 3D-neighbors follow..  12  2TAVGSTLENLKAAIAGETGAHAKYTAFAKAAREQGYEQIARLFEATAAAELIHIGLEYALVAEMEPGYEKPTVAAPSAY-SCDLNLISGANGEIYETSDMYPAFIRKAQEEGNSKAVHVFTRAKLAESVHAERY........................... 134
15 -28.400d3pwfa1 a.25.1.1 (A:2-134) automated matches {Pyrococcus furiosus [TaxId: 2261]}  ali model 3D-neighbors follow..  11  2VKRTMTKKFLEEAFAGESMAHMRYLIFAEKAEQEGFPNIAKLFRAIAYAEFVHAKNHFIALGKLGK---------------TPENLQMGIEGETFEVEEMYPVYNKAAEFQGEKEAVRTTHYALEAEKIHAELYRKAKEKAEKGED............... 132
16 -21.700d2oh3a1 a.25.1.8 (A:3-154) Uncharacterized protein AMB4284 homologue {Magnetospirillum magnetotacticum ms-1 [TaxId: 272627]}  ali model 3D-neighbors follow..  15  2....TLAEFLAHAIALETEAAERYVELADMMEAHNNLDTATVFRDMARFSTLHGDEIKQRSRALELPKLMSW-ENDIHYLMTPYHALRYARDNEIRGMEYYKEA---AANSADPEVKRLGADFAAEEAEHVVALDKWIEKTP................... 147
17 -20.400d5hjfa_ a.25.1.0 (A:) automated matches {Nostoc punctiforme [TaxId: 272131]}  ali model 3D-neighbors follow..  12  23..TAPVTEGFNVVLASFQALYLQYQKHHFVVEGSEFYSLHEFFNESYNQVQDHIHEIGERLDGLGGVPELTCFEQESEGVYSSRQMVENDLAAEQAIIGVIRRQAAQAESLGDRGTRYLYEKILLKTEERAYHLSHFLAK..................... 168
18 -19.200d1moja_ a.25.1.1 (A:) Dodecameric ferritin homolog {Halobacterium salinarum [TaxId: 2242]}  ali model 3D-neighbors follow..  12  26..AEQCVDALNADLANVYVLYHQLKKHHWNVEGAEFRDLHLFLGEAAETAEEVADELAERVQALGGVPAEASVDVEDEDVYDIRTSLANDMAIYGDIIEATREHTELAENLGDHATAHMLREGLIELEDDAHHIEHYLEDDTLVTQGAL............ 180
19 -18.300d2fzfa1 a.25.1.1 (A:10-167) Hypothetical protein PF1190 {Pyrococcus furiosus [TaxId: 2261]}  ali model 3D-neighbors follow..  12  7MADFSLEELLGMAIKAEIGAREFYKSLAEKIKI---EALKEKINWLAEEEKKHEALLRKLYSQMFPGPELQPVARELEKVQDIIDLIRWAMKAEEIAAEFYLKL---EEMVKEEEKKRLMRYLADMERGHYYTLRAEYELLL................... 153
20 -18.100d1vjxa1 a.25.1.1 (A:1-145) Hypothetical protein TM1526 {Thermotoga maritima [TaxId: 2336]}  ali model 3D-neighbors follow..  15  2....KVSDILTVAIRLEEEGERFYRELSEHFNGE----IKKTFLELADQERIHAEIFRKMSDQENWDEVDSYLEILRRKDLTLKEVLDIAISVEK---DSIILYYELKDGLVNSDAQKTVKKIIDQEKEHLRKLLEMKREST................... 145
21 -17.800d1jiga_ a.25.1.1 (A:) Dodecameric ferritin homolog {Bacillus anthracis, Dlp-2 [TaxId: 1392]}  ali model 3D-neighbors follow..  10  3..KTNVVEVLNKQVANWNVLYVKLHNYHWYVTGPHFFTLHEKFEEFYNEAGTYIDELAERILALEGKPLATSSVNEGTSKESAEEMVQTLVNDYSALIQELKEGMEVAGEAGDATSADMLLAIHTTLEQHVWMLSAFLK...................... 146
22 -17.500d2c41a_ a.25.1.0 (A:) automated matches {Thermosynechococcus elongatus [TaxId: 197221]}  ali model 3D-neighbors follow..  10  5..KEQVLTTLKREQANAVVMYLNYKKYHWLTYGPLFRDLHLLFEEQGSEVFAMIDELAERSLMLDGQPVADPADTPSSGQLTVKQMIEEAIANHELIITEMHQDAEIATEAGDIGTADLYTRLVQTHQKHRWFLKEFLAK..................... 149
23 -17.300d2c2ua_ a.25.1.0 (A:) automated matches {Deinococcus radiodurans [TaxId: 243230]}  ali model 3D-neighbors follow..  10  29..FQTVAETLQRNLATTISLYLKFKKYHWDIRGRFFRDLHLAYDEFIAEIFPSIDEQAERLVALGGSPRYSTVQVPQETVRDARTQVADLVQDLSRVGKGYRDDSQACDEANDPVTADMYNGYAATIDKIRWMLQAIMDD..................... 174
24 -16.500d3t9ja_ a.25.1.1 (A:) Dodecameric ferritin homolog {Helicobacter pylori, Nap [TaxId: 210]}  ali model 3D-neighbors follow..  11  2....KTFEILKHLQADAIVLFMKVHNFHWNVKGTDFFNVHKATEEIYEGFADMFDDLAERIAQLGHHLKLTRVKEETKTSFHSKDIFKEILEDYKHLEKEFKELSNTAEKEGDKVTVTYADDQLAKLQKSIWMLQAHLA...................... 144
25 -15.200d2fjca1 a.25.1.1 (A:27-177) Dodecameric ferritin homolog {Treponema pallidum, TpF1 [TaxId: 160]}  ali model 3D-neighbors follow..  6..IAAICEQLRQHVADLGVLYIKLHNYHWHIYGIEFKQVHELLEEYYVSVTEAFDTIAERLLQLGAQAALSGIAEETEKEITIVSALARVKRDFEYLSTRFSQTQVLAAESGDAVTDGIITDILRTLGKAIWMLGATLK...................... 150
26 -14.600d3kwoa1 a.25.1.0 (A:1-147) automated matches {Campylobacter jejuni [TaxId: 192222]}  ali model 3D-neighbors follow..  11  2....SVTKQLLQMQADAHHLWVKFHNYHWNVKGLQFFSIHEYTEKAYEEMAELFDSCAERVLQLGEKAENAKSPKVAKDCFTPLEVIELIKQDYEYLLAEFKKLNEAAEKESDTTTAAFAQENIAKYEKSLWMIGATLQG..................... 145
27 -13.700d2cf7a_ a.25.1.1 (A:) automated matches {Streptococcus suis [TaxId: 1307]}  ali model 3D-neighbors follow..  11  9..LADSKAVLNQAVADLSVAHSILHQVHWYMRGRGFMIWHPKMDEYMEEIDGYLAEMSERLITLGGAPFST--EVLGDYNVTIEEQLARVVEVFRYLAALFQKGFDVSDEEGDSVTNDIFNVAKASIEKHIWMLQAELGQAPKL................. 159
28 -13.500d3iq1a_ a.25.1.0 (A:) automated matches {Vibrio cholerae [TaxId: 243277]}  ali model 3D-neighbors follow..  12  13..SQKLANALNNLLANYQVFYMNTRGYHWNIQGKEFFELHAKFEEIYTDLQLKIDELAERILTLSARPMHSAQIKEHTDSIDGRSSMQGLVDGFSILLHQQRDILELAGETGDEGTSALMSDYIREQEKLVWMLNAWLK...................... 156
29 -12.900d2uw1a_ a.25.1.2 (A:) automated matches {Hedera helix [TaxId: 4052]}  ali model 3D-neighbors follow..  10  54.IPDDYFVVLVGDMITEEALPTYMSMLNRCDGIKD-SAWAMWTRAWTAEENRHGDLLNKYLYLSG-IQYLIGSGMDIKSENSPYLGFIYTSFQERATFISHANTAKLAQHYGDKKLAHICGSIASDEKRHATAYTKIVEKLAEIDPDTT............ 215
30 -12.600d4kvsa_ a.25.1.6 (A:) Hypothetical protein PMT1231 {Prochlorococcus marinus [TaxId: 1219]}  ali model 3D-neighbors follow..  11..KDAYSRINAIVIEGEQEAHDNYIAIGT-----LLPDHVEELKRLAKMEMRHKKGFTACGKNLGVEADMDFAREFFAPLRDNFKTPTCLLIQALLIEAFAISFYHTYIPVSDPFARKITEGVVKDEYTHLNYGEAWLKAN.................... 151
31 -12.500d2pyba_ a.25.1.1 (A:) Dodecameric ferritin homolog {Lyme disease spirochete (Borrelia burgdorferi) [TaxId: 139]}  ali model 3D-neighbors follow..  3..LDAIQLKLQELLASLHIFYSNLRGIHWNIKDTNFFVIHKKTQKLYEYIEKIIDIVAERSRMLGYDSEFR--ELDIESTSNFLPSMESIVCSLTEILKNIFGMRKLIDTAGDYGTANIMDDIMSDLEKHLWMHKALLEN..................... 149
32 -12.200d4cy9a1 a.25.1.1 (A:4-170) automated matches {Streptomyces coelicolor [TaxId: 1902]}  ali model 3D-neighbors follow..  16..AGRLIGVLRLRLHALNDLHLTLKHVHWNVVGPHFIAVHEMIDPQVDQVRDMADDVAERIAALGGVAAERKWDDYSIGRADAIAHLGALDVVYTGVVEGMRAAVEEA-GKIDPATEDLLIGQLRDLEQFQWFVRAHLES..................... 160
33 -12.200d2ib0a1 a.25.1.9 (A:17-158) Hypothetical protein Rv2844 {Mycobacterium tuberculosis [TaxId: 1773]}  ali model 3D-neighbors follow..  10  3..GSADNAALCDALAVEHATIYGYGIVSALSP----PGVNFLVADALKQHRHRRDDVIVMLSARGVTAPIAAAGQLPMQVSSAADAARLAVRMENDGATAWRAVVEHA---ETADDRVFASTALTESAVMATRWNRVLGA..................... 134
34 -11.900d1za0a1 a.25.1.2 (A:8-274) Possible acyl-[acyl-carrier protein] desaturase {Mycobacterium tuberculosis [TaxId: 1773]}  ali model 3D-neighbors follow..  12  54.LPRTITDACEILLILKDNLAGHHRELVEHFILE--DWWGRWLGRWTAEEHLHAIALREYLVVTREVDPVANEDV-RAEKYTQVETLVYMAFYERCGAVFCRNL---AAQIEEPILAGLIDRIARDEVRHEEFFANLVTHC.................... 196
35 -11.800d4a25a_ a.25.1.0 (A:) automated matches {Kineococcus radiotolerans [TaxId: 131568]}  ali model 3D-neighbors follow..  10  22..SSRLNAGLQEVLVDLTALHLQGKQAHWNIVGENWRDLHLQLDTLVEAARGFSDDVAERMRAVGGVPD-SRIGDVGPDEIDTRACVEAIVALVRHTVDTIRRVHDPI-DAEDPASADLLHAITLELEKQAWMIGSENRSPR................... 167
36 -11.500d1o9ia_ a.25.1.3 (A:) Manganese catalase (T-catalase) {Lactobacillus plantarum [TaxId: 1590]}  ali model 3D-neighbors follow..  15  18..DPIMARRLQESLG-ETTGMMSFLSQGWASTGA--EKYKDLLLDTGTEEMAHVEMISTMIGYLLEDAPFGPEDLKRDP-GNLVADMRFNVVRESEARLQVSRLYSMT---EDEGVRDMLKFLLARETQHQLQFMKAQEELE................... 193
37 -11.200d4cyba_ a.25.1.0 (A:) automated matches {Streptomyces coelicolor [TaxId: 1902]}  ali model 3D-neighbors follow..  10  21..RLYSCQRLNKVLADTRILHDLYKKYHWLMRGATFYQLHLLLDKHAGEQLELIDTVAERVQTLGGVAEITTVPRPPDGVEEVPSMLSRLLEAHELILTECHDAAARTQEYGDGTNDLLVSEVLRTNELQAWFVAEHLVD..................... 167
38 -11.000d2v8ta_ a.25.1.3 (A:) automated matches {Thermus thermophilus [TaxId: 262724]}  ali model 3D-neighbors follow..  19..DPNAAAAVQALLG-EMSTLMNYMYQSFNFRGKKLKPYYDLIANIATEELGHIELVAATINSLLAKNPGKDLEEGVDP-GNLILDLLHNFFLEVAARTHKLRVYEMT---DNPVAREMIGYLLVRGGVHAAAYGKALESLT................... 200
39 -10.800d1zpya_ a.25.1.5 (A:) Hypothetical protein NE0167 {Nitrosomonas europaea [TaxId: 915]}  ali model 3D-neighbors follow..  18  13..ETRDMHRAIISLREELEAVDLYNQRVNACKDKELKAI---LAHNRDEEKEHAAMLLEWIRR.................................................................................................. 70
40 -10.500d3ak8a_ a.25.1.1 (A:) automated matches {Salmonella enterica [TaxId: 439842]}  ali model 3D-neighbors follow..  12  13..KKATVELLNRQVIQFIDLSLITKQAHWNMRGANFIAVHEMLDGFRTALTDHLDTMAERAVQLGGVASKTPLKSYPLDIHNVQDHLKELADRYAVVANDVRKA---IGEAKDEDTADIFTAASRDLDKFLWFIESNIE...................... 154
41 -9.450d2yjka_ a.25.1.0 (A:) automated matches {Microbacterium arborescens [TaxId: 33883]}  ali model 3D-neighbors follow..  6..AAAAAQFLTPVVHKMQALVVNGKQAHWNVRGSNFIAIHELLDSVVAHAQDYADTAAERIVALGLPID-KTSTAVPAGFAQWQDEIKAIVSDIDAALVDLQAAIDGL-DEVDLTSQDVAIEIKRGVDKDRWFLLAHLAE..................... 149

FFAS is supported by the NIH grant R01-GM087218-01
1 4 7 2 5 8   jobs submitted since Jan 1, 2011
Comments and questions to: webmaster

Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Pawlowski K, Pio F, Chu Z, Reed JC, Godzik A. PAAD - a new protein domain associated with apoptosis, cancer and autoimmune diseases. Trends Biochem Sci. 2001 Feb;26(2):85-7.