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Query: [S] COG2833 Uncharacterized protein conserved in bacteria, from VFDB

Results of FFAS03 search in SCOP207
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MTDKPTYEQTLRGNAIRAISACDLDEKVRLARETASRWFARALSVRSPLDPPLPERPGRPEKPELVPPRMLKKRSLNTEHGRIALMHALAHIELNAIDLALDIVARFAVKPIPRSFFDGWMKVADDEARHFTLLRNRLKSLGADYGDMPAHDGLWQSAHQTRNDLEARLAVVPLILEARGLDVTPSLLEKMIETGDHETAAILNIIYNDEKTHVAVGAKWFRFFCARNRIDPAARFRELVRANFRGELKPPFNELARAEAGLTPSFYRSLSPVSILast
1 -39.100d4kvsa_ a.25.1.6 (A:) Hypothetical protein PMT1231 {Prochlorococcus marinus [TaxId: 1219]}  ali model 3D-neighbors follow..  16  7..........................................................................SDRYKDAYSRINAIVIEGEQEAHDNYIAIGTLLP------DHVEELKRLAKMEMRHKKGFTACGKNLGVEADMDFAREFFAPQTALGQGKTPTCLLIQALLIEAFAISFYHTYIP----VSDPFARKITEGVVKDEYTHLNYGEAWLKANLESCREELLEANRENLPLIRREDLIEDFLIAYQTEIGFNTREITRMAAAAL 221
2 -25.400d1mtyd_ a.25.1.2 (D:) Methane monooxygenase hydrolase alpha subunit {Methylococcus capsulatus [TaxId: 414]}  ali model 3D-neighbors follow..  13  47...............................KLIAKEYARMEAVKDERQFGSLQVALTRLNAGVRVHPK---------NETMKVVSNFLEVGEYNAIAATGMLWDSAQAA----EQKNGYLAQVLDEIRHTHQCAYVNYYFAKNGQDPKGMKRVFSDGFISG-DAVECSLNLQLVGEACFTNPIVAVTEWAAANGDEITPTVFLSIETDELRHMANGYQTVVSIANDPASAKYLNLFEYGSKFKVEPWVKTWDRWVYED--WGGIWIGRLGKYGV 312
3 -24.700d1za0a1 a.25.1.2 (A:8-274) Possible acyl-[acyl-carrier protein] desaturase {Mycobacterium tuberculosis [TaxId: 1773]}  ali model 3D-neighbors follow..  11  5........LELEPVVEANMTRHLDTEDIWFAHDYVPFDQGENFAFLGGRDWDP--------------------SQSTLPRTITDACEILLILKDNLAGHHRELVEHFILED---WWGRWLGRWTAEEHLHAIALREYLVVTREVDPVADVRVQHVMKGYRAEKYTQVETLVYMAFYERCGAVFCRNLAA---QIEEPILAGLIDRIARDEVRHEEFFANLVTHCLDYTRDETIAAIAARAADLDVLGADRDKLQNVADAGIFGKPQLRQL..... 246
4 -24.300d3ge3a_ a.25.1.2 (A:) automated matches {Pseudomonas mendocina [TaxId: 300]}  ali model 3D-neighbors follow..  14  4......PRKDWYELTRATNWTPSYVTEEQLFPERMSGHMGIPLE-----KWESYDEPYKTSYPEYVSIQREKDAGAYSISTLKSHYGAIAVGEYAAVTGEGRMARFSKAP----GNRNMATFGMMDELRHGQLQLFFPHEYCKKDRQFIAAKHFFDDII-TGRDAISVAIMLTFSFETGFANMFLGLAADAAEAGDYTFANLISSIQTDESRHAQQGGPALQLLIENGKREEAQKLTGPVMDYYTPLEDRSQSFKEFMYEWIIGQFERSLIDLGL 310
5 -23.100d3n20b_ a.25.1.2 (B:) Toluene, o-xylene monooxygenase oxygenase subunit TouE {Pseudomonas sp. [TaxId: 320855]}  ali model 3D-neighbors follow..  9  112...............................................................................ETLARFYTPARYLFHALQMGSVYIHQIAPAS----TITNCATYETADHLRWLTHTAYRTRELANCYPDVGFGKR-LIEKALIAWDWGEAFTAINLVTKPAVEEALQQLGSLAQSEGDTLLGLLAQAQKRDAERHRRWSSALVKMALEK--EGNREVLQKWVAKWEPLADKA......................... 292
6 -23.000d1yuza1 a.25.1.1 (A:23-157) Nigerythrin, N-terminal domain {Desulfovibrio vulgaris [TaxId: 881]}  ali model 3D-neighbors follow..  12  3.............................................................................AVGSTLENLKAAIAGETGAHAKYTAFAKAAREQGYE-QIARLFEATAAAELIHIGLEYALVAEMEPGYEKPTVAA-------PSAYSCDLNLISGANGEIYETSDMYPAFIRKAQEEGNSKAVHVFTRAKLAESVHAER........................................................... 133
7 -22.000d1nf4a_ a.25.1.1 (A:) Bacterioferritin (cytochrome b1) {Desulfovibrio desulfuricans [TaxId: 876]}  ali model 3D-neighbors follow..  16  1.........................................................................NREDRKAKVIEVLNKARAMELHAIHQYMNQHYSLDDMDYG-ELAANMKLIAIDEMRHAENFAERIKELGGE-------PTTQKEGKVVTGQAVPVIYESDADQEDATIEAYSQFLKVCKEQGDIVTARLFERIIEEEQAHLTYYENIGSHI................................................... 143
8 -21.700d1lkoa1 a.25.1.1 (A:2-147) Rubrerythrin, N-terminal domain {Desulfovibrio vulgaris [TaxId: 881]}  ali model 3D-neighbors follow..  16  6...............................................................................SRTEKNILTAFAGESQARNRYNYFGGQAKKDGFV-QISDIFAETADQEREHAKRLFKFLEGGDLEIVA--------AFPAGIIADTHANLIASAAGEHHEYTEMYPSFARIAREEGYEEIARVFASIAVAEEFHEKRFLDFARNI................................................... 141
9 -21.500d2uw1a_ a.25.1.2 (A:) automated matches {Hedera helix [TaxId: 4052]}  ali model 3D-neighbors follow..  13  55..............................................................................PDDYFVVLVGDMITEEALPTYMSMLNRCDGIKDEPSAWAMWTRAWTAEENRHGDLLNKYLYLSGR---EKTIQYLIGSGMDIKSENSPYLGFIYTSFQERATFISHANTAKLAQHYGDKKLAHICGSIASDEKRHATAYTKIVEKLAEIDPDTTVIAFADMMRKK................................ 226
10 -21.300d3olja1 a.25.1.2 (A:66-350) automated matches {Human (Homo sapiens) [TaxId: 9606]}  ali model 3D-neighbors follow..  7  31...............................KAEASFWTAEEVDLSKDI-------------------QHWESLKPEERYFISHVLAFFAASDGIVNENLVERFSQEVQIT---EARCFYGFQIAMENIHSEMYSLLIDTYIKDMPCVKKKADWALRWIGDKEATYGERVVAFAAVEGIFFSGSFASIFWLKKRG-PGLTFSNELISRDEGLHCDFACLMFKHLVHKPSEERVREIIINAVRIEQEFLTEALPVKL---IGMNCTLMKQYIEFVA 263
11 -21.200d3b3hb_ a.25.1.0 (B:) automated matches {Mycobacterium smegmatis [TaxId: 246196]}  ali model 3D-neighbors follow..  15  1...........................................................................MQGDPDVLKLLNEQLTSELTAINQYFLHSKMQDNWGFT-ELAEHTRAESFEEMRHAETITDRILLLDGLP-------NYQRLFSLRVGQTLREQFEADLAIEYEVLERLKPGIVLCREKQDATSARLLEQILADEETHIDYLETQLQLM................................................... 141
12 -21.100d2rccb_ a.25.1.0 (B:) automated matches {Bacillus halodurans [TaxId: 272558]}  ali model 3D-neighbors follow..  11  34..........................................................................TETEQEAFKKIIGLLAFLDSVQTDYSMRAAEYLTDS----SLAALMSVLSFQEVVHNQSYSYVLSSLVPKATQDEIFEYW-KFVDNPTPKTFLESIVYDVILEGLNFYSGFAFFYNLARNQ-VSTSTMINYINRDEQLHVYLFTNIFKELLVEFPELNTEETKTFVKTTLMKAADLEKD--GDKIPGINPEDMETYISFIA 252
13 -21.100d1syya_ a.25.1.2 (A:) Ribonucleotide reductase R2 {Chlamydia trachomatis [TaxId: 813]}  ali model 3D-neighbors follow..  11  70..........................................................................SEDERRVILLNLGFFSTAESLVGNNIVLAIFKHVTNP---EARQYLLRQAFEEAVHTHTFLYICESLGLDEKEI-LDPNFRTDSVEGLQEFVKNLVGYYIIMEGIFFYSGFVMILSFHRQN-IGIGEQYQYILRDETIHLNFGIDLINGIKEENPEIWTPELQQEIVELIKRAVDLEIE--PRGILGLRASMFIDYVQHIA 295
14 -21.100d4cvra_ a.25.1.1 (A:) automated matches {Escherichia coli [TaxId: 562]}  ali model 3D-neighbors follow..  15  1...........................................................................MKGDTKVINYLNKLLGNELVAINQFFLHARMFKNWGLK-RLNDVEYRESIDEMKHADRYIERILFLEGLPNLQDLGK-------LNIGEDVEEMLRSDLALELDGAKNLREAIGYADSVRDYVSRDMMIEILRDEEGHIDWLETELDLI................................................... 141
15 -20.900d1j30a_ a.25.1.1 (A:) Hypothetical rubrerythrin {Sulfolobus tokodaii [TaxId: 111955]}  ali model 3D-neighbors follow..  14  5...............................................................................TKTAENLKQGFIGESMANRRYLYFAKRADEEGYP-EIAGLLRSIAEGETAHAFGHLDFIRQGGLT-----------PATDKPIGTLEQMIESAIAGETYEWTQMYPGFAKVAREEGFPEVAEWFETLARAEKSHAEKFQNVLKQL................................................... 138
16 -20.900d3pvtb1 a.25.1.2 (B:2-237) automated matches {Escherichia coli [TaxId: 511145]}  ali model 3D-neighbors follow..  9  1...............................................................................NQLTAYTLRLGDNCLVLSQRLGEWCGHAPE-----EIDLALANIGLDLLGQARNFLSYAAELAGEGDEDDERQFSNLLLVEQPNGNFADTIARQYFIDAWHV----ALFTRLMESRDPQLAAISAKAIKEARYHLRFSRGWLERLGNGTDVSGQKMQQAIIDIALSEEGIAVDPRTLRAA--WEAEVFAGINEATL 207
17 -20.300d3pwfa1 a.25.1.1 (A:2-134) automated matches {Pyrococcus furiosus [TaxId: 2261]}  ali model 3D-neighbors follow..  13  3.............................................................................KRTMTKKFLEEAFAGESMAHMRYLIFAEKAEQEGFP-NIAKLFRAIAYAEFVHAKNHFIALGKLG---------------------KTPENLQMGIEGETFEVEEMYPVYNKAAEFQGEKEAVRTTHYALEAEKIHAELYRKAKEKAEKGED.............................................. 132
18 -18.600d3dhza_ a.25.1.2 (A:) Ribonucleotide reductase R2 {Corynebacterium ammoniagenes [TaxId: 1697]}  ali model 3D-neighbors follow..  10  57..........................................................................TPQEQLATMRVFTGLTLLDTIQGTVGAISLLPDAETM---HEEAVYTNIAFMESVHAKSYSNIFMTLASTPQINEAFRWSEENENLQRGDDPLKKKVASTLLESFLFYSGFYLPMYLSSRA-TNTADIIRLIIRDESVHGYYIGYKYQQGVKKLSEAEQEEYKAYTFDLMYDLYENEIETEDIYDDLGWTEDVKRFLRYNA 266
19 -18.000d1mxra_ a.25.1.2 (A:) Ribonucleotide reductase R2 {Escherichia coli [TaxId: 562]}  ali model 3D-neighbors follow..  9  42...............................KQLSFFWRPEEVDVSRDR-------------------IDYQALPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLISIP---ELETWVETWAFSETIHSRSYTHIIRNIVNDPSVVTVNGKTVTVSLRELKKKLYLCLMSVNALEAIRFYVSFACSFAFAERE-EGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDSMIGLNKDILCQYVEYIT 312
20 -17.500d2oh3a1 a.25.1.8 (A:3-154) Uncharacterized protein AMB4284 homologue {Magnetospirillum magnetotacticum ms-1 [TaxId: 272627]}  ali model 3D-neighbors follow..  11  2................................................................................TLAEFLAHAIALETEAAERYVELADMMEAHNNL-DTATVFRDMARFSTLHGDEIKQRSRALELP--RWKTPPEVGDENDIHYLMTPYHALRYARDNEIRGMEYYKEAAA---NSADPEVKRLGADFAAEEAEHVVALDKWIEKT................................................... 146
21 -17.200d1vjxa1 a.25.1.1 (A:1-145) Hypothetical protein TM1526 {Thermotoga maritima [TaxId: 2336]}  ali model 3D-neighbors follow..  11  2................................................................................KVSDILTVAIRLEEEGERFYRELSEHFNG-----EIKKTFLELADQERIHAEIFRKMSDQENWDEVDSYLAGYA-SEILRRKDLTLKEVLDIAISVEKDSIILYYELKD---GLVNSDAQKTVKKIIDQEKEHLRKLLEMKRES................................................... 144
22 -17.100d1o9ia_ a.25.1.3 (A:) Manganese catalase (T-catalase) {Lactobacillus plantarum [TaxId: 1590]}  ali model 3D-neighbors follow..  10  16............................................................................RSDPIMARRLQESLGGQWGETTGMMSFLSQGWASTGAEKYKDLLLDTGTEEMAHVEMISTMIGYLGLNASLNNPNGAAWNAGYVTSSGNLVADMRFNVVRESEARLQVSRLYSM---TEDEGVRDMLKFLLARETQHQLQFMKAQEELEEKYGIIVPGDMKEIEHSEFSHVL----GDGSKAFEGQVAKDGEKFTYQE. 243
23 -17.100d2fzfa1 a.25.1.1 (A:10-167) Hypothetical protein PF1190 {Pyrococcus furiosus [TaxId: 2261]}  ali model 3D-neighbors follow..  12  8.............................................................................ADFSLEELLGMAIKAEIGAREFYKSLAEKIKIE----ALKEKINWLAEEEKKHEALLRKLYSQMFPGKEVVFPKEHIGPELQPVARELEKDLIRWAMKAEEIAAEFYLKLEE---MVKEEEKKRLMRYLADMERGHYYTLRAEYELLLNWE............................................... 156
24 -15.600d2itba1 a.25.1.7 (A:3-201) Putative tRNA-(Ms(2)io(6)a)-hydroxylase PP2188 {Pseudomonas putida [TaxId: 303]}  ali model 3D-neighbors follow..  17  27...................................................................................TLLIDHKNCEFKAASTALSLIAKYNTHL---DLINMMSRLAREELVHHEQVLRLMKRRGVPLRPVSAGRYASGLRRLVRAHEPVKLVVVGAFIEARSCERFAALVPHL----DEELGRFYHGLLKSEARHYQGYLKLAHNYGDE--ADIARCVELVRA--AEMELIQSPDQELRFHSGIPQ........... 199
25 -15.600d3oj5a_ a.25.1.0 (A:) automated matches {Mycobacterium tuberculosis [TaxId: 419947]}  ali model 3D-neighbors follow..  17  1..............................................................................KTKFHALMQEQIHNEFTAAQQYVAIAVYFDSEDLP-QLAKHFYSQAVEERNHAMMLVQHLLDRDLRVEIPGVDT-------RNQFDRPREALALALDQERTVTDQVGRLTAVARDEGDFLGEQFMQWFLQEQIEEVALMATLVRVA................................................... 139
26 -15.000d2v8ta_ a.25.1.3 (A:) automated matches {Thermus thermophilus [TaxId: 262724]}  ali model 3D-neighbors follow..  15  33.........................................................................................RFGEMSTLMNYMYQSFNFRGKKALKPYYDLIANIATEELGHIELVAATINSLGANSLVMGAMGEHWNGEYVFTSGNLILDLLHNFFLEVAARTHKLRVYEM---TDNPVAREMIGYLLVRGGVHAAAYGKALESLTGVEMTK............................................ 206
27 -13.700d4iwka_ a.25.1.1 (A:) Non-hem ferritin {Pseudo-nitzschia multiseries [TaxId: 37319]}  ali model 3D-neighbors follow..  12  1..............................................................................SEELLDLFNRQVTQEFTASQVYLSASIWFDQNDWE-GMAAYMLAESAEEREHGLGFVDFANKRNIPIELQAVPAPVSCAEWSSPEDVWQSI----LELEQANTRSLLNLAEAASTCHDFAVMAFLNPFHLQQVNEEDKIGSILAKV................................................... 141
28 -12.900d3bvfa1 a.25.1.1 (A:1-166) automated matches {Helicobacter pylori [TaxId: 210]}  ali model 3D-neighbors follow..  11  3..............................................................................SKDIIKLLNEQVNKEMNSSNLYMSMSSWCYTHSLD-GAGLFLFDHAAEEYEHAKKLIIFLNENNVPVQLTSISA-------EHKFEGLTQIFQKAYEHEQHISESINNIVDHAIKSKDHATFNFLQWYVAEQHEEEVLFKDILDKI................................................... 141
29 -12.600d1zpya_ a.25.1.5 (A:) Hypothetical protein NE0167 {Nitrosomonas europaea [TaxId: 915]}  ali model 3D-neighbors follow..  20  11................................................................................................................................................................SDETRDMHRAIISLREELEAVDL---YNQRVNACKDKELKAILAHNRDEEKEHAAMLLEWIRRCDPAFDKELKDYLFT..................................... 85
30 -12.500d1s3qa1 a.25.1.1 (A:3-164) Non-hem ferritin {Archaeoglobus fulgidus [TaxId: 2234]}  ali model 3D-neighbors follow..  11  3..............................................................................SEKMVEALNRQINAEIYSAYLYLSMASYFDSIGLK-GFSNWMRVQWQEELMHAMKMFDFVSERGGRVKLYAVEE-------PSEWDSPLAAFEHVYEHEVNVTKRIHELVEMAMQEKDFATYNFLQWYVAEQVEEEASALDIVEKL................................................... 141
31 -12.300d1rcwa_ a.132.1.4 (A:) Hypothetical protein CT610 {Chlamydia trachomatis [TaxId: 813]}  ali model 3D-neighbors follow..  12  34.....................................................................................LQAYAKDYYLHIKAFPKYLSAIHSRCDDLEARKLLLDNLMDEENHIDLWKQFVFALGVTPEELEAHEPSEAAKAWCTGDSLAAGVAALYSYESQIPRIAREKIRGLTEY-NPEDYAYFTEHEEADVRHAREEKALIEMLLKDDADKVLEASQEVTQ.................................. 203
32 -12.100d3hlxa1 a.132.1.4 (A:2-251) Coenzyme PQQ synthesis protein C, PqqC {Klebsiella pneumoniae [TaxId: 272620]}  ali model 3D-neighbors follow..  7  1LITDTLSPQAFEEALRAKG------DFYHIHHPYHIAMHNGNATREQ--------------------------------------IQGWVANRFYYQTTIPLKDAAIMANCPDAQTRRKWVQRILDHDGGIEAWLRLGEAVGLSRDDLPGVRFAVDAYLNFARRACWQEAACSSLTELFAPQIHQSRLDSWPQH-KEEGYFFFRSRLSQANRDVEHGLALAKAYCDS-AEKQNRMLEILQFKL---DILWSMLDAMTMAYALQRPPYHTVTD... 240
33 -10.700d2ib0a1 a.25.1.9 (A:17-158) Hypothetical protein Rv2844 {Mycobacterium tuberculosis [TaxId: 1773]}  ali model 3D-neighbors follow..  9  1............................................................................SEGSADNAALCDALAVEHATIYGYGIVSALS-----PPGVNFLVADALKQHRHRRDDVIVMLSARGVTAPIAAA-----GYQLPMQVSSAADAARLAVRMENDGATA---WRAVVEHAETADDRVFASTALTESAVMAT............................................................ 126
34 -10.500d3a68a_ a.25.1.0 (A:) automated matches {Soybean (Glycine max) [TaxId: 3847]}  ali model 3D-neighbors follow..  12  29..............................................................................VDESESAVNEQINVEYNVSYVYHAMFAYFDRDNVALRLAKFFKESSEEEREHAEKLMEYQNKRGGKVKLQSIVMPLSDFDHADKGDALHAM--LALSLEKLTNEKLLNLHSVATKNGDVQLADFVEEYLGEQVEAIKRISEYVAQL................................................... 175
35 -10.500d1mtyb_ a.25.1.2 (B:) Methane monooxygenase hydrolase beta subunit {Methylococcus capsulatus [TaxId: 414]}  ali model 3D-neighbors follow..  9  72.....HGGRPSWGNETTELRTVDWFKHRDPLRRWHAPYVKDKAEEWRYTDRFLQGYSADGQIRAMNPT---------RDEFINRYWGAFLFNEY-GLFNAHSQGAREALSDV---TRVSLAFWGFDKIDIAQMIQLERGFLAKIVPGFKSARLAVEGLWQEVFDWNESAFSVHAVYDALQFVRREFFQRLAPRFGDNLTPFFINQAQTYFQIAKQGVQDLYYNCLGDDPEFSDYNRTVM.................................... 312
36 -10.200d1z6om1 a.25.1.1 (M:1-191) (Apo)ferritin {Cabbage looper (Trichoplusia ni), H chain [TaxId: 7111]}  ali model 3D-neighbors follow..  12  18..............................................................................HRSCRNSMRQQIQMEVGASLQYLAMGAHFSKDVVNRPFAQLFFDAASEEREHAMKLIEYLLMRGELTNDVSSLLQVRPPTRSSWKGGVEALEHA-LSMESDVTKSIRNVIKACEDDSEFNDYHLVD---------------YLTGDFLEEQYKGQRDLAGKAST---------LKKLMDRHEALGEFIFDKLLGIDV 191
37 -9.330d1jiga_ a.25.1.1 (A:) Dodecameric ferritin homolog {Bacillus anthracis, Dlp-2 [TaxId: 1392]}  ali model 3D-neighbors follow..  12  38..................................................................................................................TLHEKFEEFYNEAGTYIDELAERILALEGKLATMKEYLATSSVNEGTSKESAEEMVQTLVNDYSALIQELKEGMEVAGEAGDATSADMLLAIHTTLEQHVWMLSAFLK..................................................... 146
38 -9.070d5hjfa_ a.25.1.0 (A:) automated matches {Nostoc punctiforme [TaxId: 272131]}  ali model 3D-neighbors follow..  13  58..................................................................................................................SLHEFFNESYNQVQDHIHEIGERLDGLGGVPVATFSKLAELTCFEQESEGVYSSRQMVENDLAAAIIGVIRRQAAQAESLGDRGTRYLYEKILLKTEERA-----HLSHFLAKDSLTLGFVQAA..................................... 179
39 -9.030d1moja_ a.25.1.1 (A:) Dodecameric ferritin homolog {Halobacterium salinarum [TaxId: 2242]}  ali model 3D-neighbors follow..  13  61..................................................................................................................DLHLFLGEAAETAEEVADELAERVQALGGVPHASPETLQAEASVDVEDEDVYDIRTSLANDMAIDIIEATREHTELAENLGDHATAHMLREGLIELEDDA-----HIEHYLEDDTLVTQGAL....................................... 180
FFAS is supported by the NIH grant R01-GM087218-01
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Comments and questions to: webmaster
Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Veeramalai M, Ye Y, Godzik A. TOPS++FATCAT: fast flexible structural alignment using constraints derived from TOPS+ Strings Model. BMC Bioinformatics. 2008 Aug 31;9(1):35