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Query: [R] KOG4095 Uncharacterized conserved protein (tumor-specific protein BCL7 in humans), from VFDB

Results of FFAS03 search in SCOP207
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MSGRSVRAETRSRAKDDIKKVMAAIEKVRKWEKKWVTVGDTSLRIFKWVPVTDSKEKEKSKSNSSAAREPNGFPSDASANSSLLLEFQDENSNQSSVSDVYQLKVDSSTNSSPSPQQSESLSPAHTSDFRTDDSQPPTLGQEILEEPSLPSSEVADEPPTLTKEEPVPLETQVVEEEEDSGAPPLKRFCVDQPTVPQTASESLast
1 -5.510d2hhpa1 a.160.1.1 (A:202-351) Poly(A) polymerase, PAP, middle domain {Baker`s yeast (Saccharomyces cerevisiae) [TaxId: 4932]}  ali model 3D-neighbors follow..  7  111.ATHNITESTKKVILQEFVRGVQITNDIFSNKKSWANLFE.................................................................................................................................................................. 149
2 -5.040d1fjgm_ a.156.1.1 (M:) Ribosomal protein S13 {Thermus thermophilus [TaxId: 274]}  ali model 3D-neighbors follow..  22  95LPVRGQRTRTNARTR---KGPRKTVAGKKKAPRK........................................................................................................................................................................ 125
3 -4.920d1v88a1 b.55.1.1 (A:8-124) Oxysterol binding protein-related protein 8 (ORP-8, KIAA1451) {Human (Homo sapiens) [TaxId: 9606]}  ali model 3D-neighbors follow..  23  7.....................LKIRGTLKSWTKLWCVLKPGVLLIYK........................................................................................................................................................... 32
4 -4.850d1fgya_ b.55.1.1 (A:) Grp1 {Mouse (Mus musculus) [TaxId: 10090]}  ali model 3D-neighbors follow..  22  11....................LLKLGGRVKTWKRRWFILTDNCLYYFE........................................................................................................................................................... 37
5 -4.810d3l51b1 d.215.1.0 (B:595-752) automated matches {Mouse (Mus musculus) [TaxId: 10090]}  ali model 3D-neighbors follow..  8  1..GKVLDAIIQEKKSGRIPGIYGRLGDLGAIDEKYDIAISSCCHALDYIVVDSIDTAQE............................................................................................................................................... 57
6 -4.770d1dm9a_ d.66.1.3 (A:) Heat shock protein 15 kD {Escherichia coli [TaxId: 562]}  ali model 3D-neighbors follow..  23  2..AVEVRLDTRALAREMIEGGKVHYNGQRSKPSKIVELNA.................................................................................................................................................................. 49
7 -4.760d1d1na_ b.43.3.1 (A:) Initiation factor IF2/eIF5b, domains 2 and 4 {Bacillus stearothermophilus [TaxId: 1422]}  ali model 3D-neighbors follow..  30  52......EIDSLKRYKDDVREVAQGYE................................................................................................................................................................................ 71
8 -4.740d1qqha_ b.91.1.1 (A:) E2 regulatory, transactivation domain {Human papillomavirus type 18 [TaxId: 333761]}  ali model 3D-neighbors follow..  20  1..........KSKAHKAIE-ALQGLAQSAYKTEDW-TLQDTCEELWNTEP........................................................................................................................................................ 41
9 -4.610d2nn6c1 d.14.1.4 (C:7-187) Exosome complex exonuclease RRP43 {Human (Homo sapiens) [TaxId: 9606]}  ali model 3D-neighbors follow..  11  11FLKENCRPD--GRELGEFRTTTVNIGSISTADSALVKLGNTTVICGVKAEFAAPSTDAPDK............................................................................................................................................. 70
10 -4.570d2wp8b1 d.14.1.0 (B:3-152) automated matches {Baker`s yeast (Saccharomyces cerevisiae) [TaxId: 4932]}  ali model 3D-neighbors follow..  11  5YSPEGLRLD--GRRWNELRRFESSINTHPH--SSYMEQGNNKIITLVKGPKEPRLKSQMDTS............................................................................................................................................ 66
FFAS is supported by the NIH grant R01-GM087218-01
1 4 8 3 4 1   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Jaroszewski L, Slabinski L, Wooley J, Deacon AM, Lesley SA, Wilson IA, Godzik A. Genome pool strategy for structural coverage of protein families. Structure. 2008 Nov 12;16(11):1659-67.