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Query: [S] KOG4102 Uncharacterized conserved protein, from VFDB

Results of FFAS03 search in SCOP207
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MDSNCDLSMVNGQTEPKDPKWASSSTQITSRASETFSGVGSAISTETSLQPVAAPTMYCLRLAQQRPITERHVHFHAGVIDNEHMNRRKSKCCCIYRKPHPFGESSSSTDDECEHCFGHPEVRTRNRLEKQRIQEQQNGCSCCHHHHRLHSNRNNRPPTEEIAQHKDDLAKEEPKSVVNNESSLKLLNEENVKSSKPRFRRQRKAEENPLRKCSSVLVTQRAENRKKNLast
1 -6.960d2f4pa1 b.82.1.9 (A:2-135) Hypothetical protein TM1010 {Thermotoga maritima [TaxId: 2336]}  ali model 3D-neighbors follow..  10  105.............................................................IGISTQVHLGPAEWLGSVTEEEYRKATEGK......................................................................................................................................... 134
2 -6.670d2d8ra1 g.39.1.16 (A:8-93) THAP domain-containing protein 2 {Human (Homo sapiens) [TaxId: 9606]}  ali model 3D-neighbors follow..  7  11..................................................ATTYNKHINISFHRFPLDPKRRKEWVRLVRRKNFVPGKHTFLCSKHFEASCFDLTGQ......................................................................................................................... 67
3 -5.900d5l19a_ b.22.1.0 (A:) automated matches {Human (Homo sapiens) [TaxId: 9606]}  ali model 3D-neighbors follow..  9  2.............................................HPSPPPEKKELRKVAHLTGKSNSRSMPLEWEHEKYKKGGLVINETGLYFVYSK.................................................................................................................................. 63
4 -5.660d1k28a1 b.40.8.1 (A:6-129) Tail-associated lysozyme gp5, N-terminal domain {Bacteriophage T4 [TaxId: 10665]}  ali model 3D-neighbors follow..  12  3........................................................................LNWFVGVVDPLKLGRVRVRVVGLHPPQRAQGDVMGIPTEK.................................................................................................................... 46
5 -5.600d1ucta1 b.1.1.4 (A:2-100) Ig alpha Fc receptor, FCARI (CD89) {Human (Homo sapiens) [TaxId: 9606]}  ali model 3D-neighbors follow..  21  52..............................................................RRLKFWNETDPEFVIDHMDANKAGRYQ----CQYRIGHYRFRYSD......................................................................................................................... 92
6 -5.340d4lyya1 c.61.1.0 (A:1-175) automated matches {Shewanella pealeana [TaxId: 398579]}  ali model 3D-neighbors follow..  16  64..........................................MSVSSYGNEMSSSRDVKILKDVQSEIQGRDVLIVEDLIDSLLREPKSLALCTLLDKPER............................................................................................................................... 133
7 -5.330d3p2ta1 b.1.1.0 (A:2-96) automated matches {Human (Homo sapiens) [TaxId: 9606]}  ali model 3D-neighbors follow..  19  47..............................................................RQNPLEPKNKARFSIPSMTEDYAGRYR----CYYRSPVGWSQPSD......................................................................................................................... 87
8 -5.250d1oeda_ f.36.1.1 (A:) Acetylcholine receptor protein, alpha chain {Marbled electric ray (Torpedo marmorata) [TaxId: 7788]}  ali model 3D-neighbors follow..  7  28.DSGEKMTLSISVLLSLTVFLLVIVELIPSTSSAVPLIGKYMLFTMIFVISSIIITVVVINTHHRSPSTHTMPQWVRKIF------DTIPNVMFFSTMKRASKEKQENKIFADDIDISDISGKQVTGEVIFQTPLIKNPDVKSAIEGVKYIAEHMKSDEESSNAAEE............................................................. 188
9 -5.250d1vdma1 c.61.1.1 (A:1-153) Pprobable purine phosphoribosyltransferase PH0095 {Pyrococcus horikoshii [TaxId: 53953]}  ali model 3D-neighbors follow..  13  54........................................KVIDVKFYKGIDERGEKPVITIPIHGDLKDKRVVIVDDVSDTKKLGAKEIKIACLAMKPWT............................................................................................................................... 125
10 -5.170d2gqba1 a.282.1.1 (A:1-130) Hypothetical protein RPA2825 {Rhodopseudomonas palustris [TaxId: 1076]}  ali model 3D-neighbors follow..  10  14......................DSAAASPGGAQAPATTGAAGTAPTAPQPTAAPSIDVAPILDKAVKAKGEKLEWRTSIVDDSSLSARKE.......................................................................................................................................... 88
FFAS is supported by the NIH grant R01-GM087218-01
1 4 8 3 4 1   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Jaroszewski L, Slabinski L, Wooley J, Deacon AM, Lesley SA, Wilson IA, Godzik A. Genome pool strategy for structural coverage of protein families. Structure. 2008 Nov 12;16(11):1659-67.