FFAS03 results for COG0256

Query: [J] COG0256 Ribosomal protein L18, from VFDB

Results of FFAS03 search in VFDB
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.

						`. 10 . 20 . 30 . 40 . 50 . 60 . 70 . 80 . 90 . 100 . 110 .`
#	Score	Template	Links and tools	%id	First	`MLNKVQSRKRRHLRVRNKISGTPERPRLAVYRSEKNIYAQVIDDVNGTTLVSASTLDKDFSAKAGSNKEAAKLVGGIVAKKALDKGIKQVVFDRGGYIYHGRIKELAEAAREAGLEF`	Last
1	-76.800	`[J] COG0256 Ribosomal protein L18`	`ali`	100	1	`MLNKVQSRKRRHLRVRNKISGTPERPRLAVYRSEKNIYAQVIDDVNGTTLVSASTLDKDFSAKAGSNKEAAKLVGGIVAKKALDKGIKQVVFDRGGYIYHGRIKELAEAAREAGLEF`	117
2	-41.600	`[J] KOG3333 Mitochondrial/chloroplast ribosomal protein L18`	`ali follow..`	20	56	`...ELLSVARKERGWRTVFPSREFWHRLRVIRTQHHVEALVEHQNGKVVVASTREWAIKKHLYSTRNVVACESIGRVLAQRCLEAGINFMVYQPTPWAASDSMKRLQSAMTEGGVVL`	171
3	-30.800	`[J] KOG0875 60S ribosomal protein L5`	`ali follow..`	18	1	`...........................MIVRVTNRDIICQIAEGDMIVCTAYAHELPKYGVKVGPTNYAAAYCTGLPLARRLLSRSAFTCYLDAGLARTGNKVFGALKGAVDGGLSI`	123
4	-11.200	`[J] KOG0407 40S ribosomal protein S14`	`ali follow..`	14	1	`MAPRKAKVQKEEVQVQLGPQVRDGE--AHIYASFNDTFVHVTDLSGRETIARVTGGMKVKADRDEASPYAAMLAAQDVAEKCKTLGITALHIKLRATGGNKT-QSALRALARSSMKI`	126
5	-10.500	`[J] COG0100 Ribosomal protein S11`	`ali follow..`	21	3	`.......KANTASRVRKKVRKTVSEGIVHVHASFNNTIITITD--QGNALSWATSGGAGFKGSRKSTPFAAQVAAEAAGKVAQEYGVKNLEVRIKGPGPGRE--SSVRALNALGFKI`	109
6	-9.220	`[J] KOG0408 Mitochondrial/chloroplast ribosomal protein S11`	`ali follow..`	19	100	`...........................VYIRASKNNTLVTVMD--KNEVITSTSCRLEGFKNARKKTTIAGQTTGVAAGQRLVRRGIRTVRVQVKGL--PGR-MTCVKGLTVAGVHV`	186
7	-7.670	`[R] COG3380 Predicted NAD/FAD-dependent oxidoreductase`	`ali follow..`	18	9	`.....................................................................GTGIAGLSAAHALRSAGQTVQLFDKG-HGSGGRMASSEAGTLDLGAQY`	57
8	-6.260	`[O] COG5664 Predicted secreted Zn-dependent protease`	`ali follow..`	15	107	`.............SALPKLTITYTLPELAIETHWQTFIAGVKKHELVFIKEMVSAIEAATVGLAVADDPQCRKIKSEMTKRLRAQRQKSRDFDKAELSDGGNVHQLILNLVNGG...`	220
9	-5.780	`[H] COG1232 Protoporphyrinogen oxidase`	`ali follow..`	18	16	`.....................................................................GAGPAGLTTAYTLAKAGRGVTVLEMDETYVGG----ISRTVDYKGFKF`	59
10	-5.610	`[T] COG0784 FOG: CheY-like receiver`	`ali follow..`	13	1	`...............................MTERRLRVLVVEDESMIAMLIEDTLCELGHEVAATASRMQEAL-----DIARKGQFDIAIIDVNL---GEPSYPVADILAERNVPF`	79

FFAS is supported by the NIH grant R01-GM087218-01

jobs submitted since Jan 1, 2011

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