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Query: [P] COG0370 Fe2+ transport system protein B, from VFDB

Results of FFAS03 search in VFDB
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MSQNTYCILGNPNTGKTSLFNALTGSYEYVGNWSGVTVEKKVGTLRSKTGKLIDLPGIYDLNPISRDETVVTRFLLEEKFDCMLNIVDSSQIERNLNLTVQLLEYGAPVVMGLNMIDVAAGRGIHLNIQNLAKKLRIPILPVVARSGKGTEDILSTLSEKHVAPAIPLVLQYGEPAEKAIKEIQALTKELIPAKQSRWLAIQFLSKNEVTEAFLTSNSAFEQLQQIRAELESELNGKLENHFHQVRASYIHDICLTSVEYTRNSDIPLSDKLDKIFTHKLLGIPIFLGIMWLIFQITFTWVGAPLSDMLDGFIGGSLTDWVTSFLTTIGASGFIIDLVADGIIAGVGGVLVFVPQILVIFFFISVLEDSGYMARIAVVMDRVMEIFGLNGKAFIPMIIGFGCNVPGIMAARSIEESKERTLTILVSPFMSCSARLPVYALFVGVFFEKHQALVVLSLYVIGILMALIVTKILSKTILKKDNSVFVVELPPYRLPSLKTLWRSTWEKGKGFLRKAGTFIFAGSVIIWLLNYAGPSGLDVPMGESFLAIIGGMLAPLLVPLGFGTWQAGATLIPGFLAKEVVVSTMAIIYAVGESSLGSIVSTFYTPLSAYCFMLFILLYIPCLATVAAIRKETSSWKWTAFSVAYPLVTAYVLVFLVYQIGSLFVLast
1 -207.000[P] COG0370 Fe2+ transport system protein B  ali  100  1MSQNTYCILGNPNTGKTSLFNALTGSYEYVGNWSGVTVEKKVGTLRSKTGKLIDLPGIYDLNPISRDETVVTRFLLEEKFDCMLNIVDSSQIERNLNLTVQLLEYGAPVVMGLNMIDVAAGRGIHLNIQNLAKKLRIPILPVVARSGKGTEDILSTLSEKHVAPAIPLVLQYGEPAEKAIKEIQALTKELIPAKQSRWLAIQFLSKNEVTEAFLTSNSAFEQLQQIRAELESELNGKLENHFHQVRASYIHDICLTSVEYTRNSDIPLSDKLDKIFTHKLLGIPIFLGIMWLIFQITFTWVGAPLSDMLDGFIGGSLTDWVTSFLTTIGASGFIIDLVADGIIAGVGGVLVFVPQILVIFFFISVLEDSGYMARIAVVMDRVMEIFGLNGKAFIPMIIGFGCNVPGIMAARSIEESKERTLTILVSPFMSCSARLPVYALFVGVFFEKHQALVVLSLYVIGILMALIVTKILSKTILKKDNSVFVVELPPYRLPSLKTLWRSTWEKGKGFLRKAGTFIFAGSVIIWLLNYAGPSGLDVPMGESFLAIIGGMLAPLLVPLGFGTWQAGATLIPGFLAKEVVVSTMAIIYAVGESSLGSIVSTFYTPLSAYCFMLFILLYIPCLATVAAIRKETSSWKWTAFSVAYPLVTAYVLVFLVYQIGSLFV 664
2 -30.200[R] COG1084 Predicted GTPase  ali follow..  26  164....TVVIAGFPNVGKSTLLRTLTGAEPEVADYPFTTKGIQIGHLKWKRIQVIDTPGLLDRPVEDMNNIELQAMVLENIADVIMFIFDASELESQYSLYLGIRSVDIPVVTVFNKMDLAENVKYLEEYINMVE----DPLKVSAFEGRGVSKIIKKLEGLYEKETR.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. 330
3 -27.200[E] COG4917 Ethanolamine utilization protein  ali follow..  16  1MK--RIAFVGSVGAGKTTLFNALQGNYTLA---------RKTQAVEFNDKGDIDTPGEYFNHPRWYHALIT----TLQDVDMLIYVHGANDPESRLPAGLLDIGVSKRQIAVISKTDMPDADVAATRKLLLETGFEEPMFELNSHDPQSVQQLVDYLASLTKQEEAGEKTHHSE.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 159
4 -27.000[R] KOG2486 Predicted GTPase  ali follow..  18  137....EFALVGRSNVGKSSLLNSLVRRKRLTSKKPGKT-QCINHFRINDKWYLVDLPG-YGYASAPHELKFTKDYFLNSTLVSVFLLVDASIKPIDLEYASWLGQNQVPMTLIFTKCDKRKKKKNEANIKEFQDLIQ-PWIMTSSVTNQGRDEILLHMAQLRNY..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 314
5 -26.500[R] COG0218 Predicted GTPase  ali follow..  18  27....EIALAGRSNVGKSSFINTMLNRKNRTSGKPGKTQLLNFFNIDD-KMRFVDVPG-YGYARVSKKERMIEEYLTTREN-AVVSLVDLRH-ADDVQMYEFLKYYEIPVIIVATKADKIPRGKWNKHESAIKKKLNFDFILFSSVSKAGMDEAWDAILEKL....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 195
6 -24.900[R] COG3596 Predicted GTPase  ali follow..  18  37.YEPVIGIMGKTGAGKSSLCNALFAGEVSVSDVAACTRDPLRFRLQEHFMTIVDLPGVGE-SGVRDTEYAALYREQLPRLDLILWLIKADD-DEHFYRQVIGEAYRHKMLFVISQSDKAEKQNISRKICLLHELF--PVCAVSVRLQWGLRVMAERMIKCLPREPS.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. 221
7 -24.000[R] KOG1490 GTP-binding protein CRFG/NOG1 (ODN superfamily)  ali follow..  16  170....TVLICGYPNVGKSSFMNKVTRADVDVQPYAFTTKSLFVGHTKYLRYQVIDTPGILPFEDRNIIEMCSITALAH--RAAVLFFLDISTIAQQAALFHSIKSLNKPLVIVCNKTDLMPMENISEEDRKLIEEMEQVLLKMSTLTDEGVMSVKNAACERLLDQRVEAKMKSKKINDHLNRFHVAIPKPRDSIERLPCIPQVVLEAKAKEAAAMEKRKTEKDLEEEAGVYSASLKKNYILQHDEWKEDIMPEILDG---------HNVADFIDPDILQRL................................................................................................................................................................................................................................................................................................................................................................................................ 462
8 -21.700[R] COG1159 GTPase  ali follow..  19  11.....IAIVGRPNVGKSTLLNKLLGQKISTSRKAQTTRHRIVGIHTEGPYQAIDTPGLHMEEKRAINRLMNKAASSSGDVELVIFVVEGTR-PDDEMVLNKLRDGKAPVILAVNKVDNVQEKVDLLPHLQFLASQ-LDIVPISAETGMNVDTIAGIVRKHL....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 173
9 -21.600[R] COG1160 Predicted GTPases  ali follow..  14  1MATPVVALVGRPNVGKSTLFNRLTRTRDAVADFPGLTRDRKYGHIAGYDFIVIDTGGIDGTEEGVEEKMAEQSLLAIDEADIVLFLVDARATAADIGIANYLRQQNKITVVVANKTDGIDADSHCAEFYQLG-----EIEQIAASQGRGVTQLMEQVLAPFAEK----------------------------------------MENADENDRTSEEEQDEWEQEFDFDSEEDTALIDDALDEELEEEQDKNIKIAIVGRPNVGKSTLTNRIDRVVVFDMPGTTRDSIYIPMERDGQQYTLIDTAGVRKRGKVHLAVEKFSVIKTLQAIQDANVVLLTIDARENISDQDLSLLGFIL-LVIVVNKWDDQDVKDRVKSELDRRLDFIDFARVHFISALHGSGVGNLFDSIKEAYACATQKMTTSLLTRILQ.......................................................................................................................................................................................................................................... 402
10 -19.500[T] KOG1487 GTP-binding protein DRG1 (ODN superfamily)  ali follow..  16  66....RIGFVGFPSVGKSTLLSNLAGVYSEVAAYEFTTLTTVPGRYKGAKIQLLDLPGI--IEGAKDGKGRGRQVIVARTCNLILIVLDVLKPLGHKKIIENELENSKPPNIGFKKKDKGGINLTATCPQSELDAETVKSILAEYKIHNADVTLRSDAT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 226
11 -19.500[R] COG1163 Predicted GTPase  ali follow..  16  67....SVGFVGFPSVGKSTLLSKLTGTESEAAEYEFTTLVTVPGRYKGAKIQMLDLPGI--IDGAKDGRGRGKQVIVARTCNLLFIILDVNKPLHHKQIIEKELEGKTPPDILIKKKEKGGIS--NDEIRAVMSEYRINSAEIAFRCDATVDDLIDVLEA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 237
12 -19.300[T] KOG1486 GTP-binding protein DRG2 (ODN superfamily)  ali follow..  13  64....RVALIGFPSVGKSTLLTMLTGTHSEAASYEFTTLTCIPGHYNDTKIQLLDLPGI--IEGASEGKGRGRQVIVAKSSDLVLMVLDASKSEGHRQILTKELEAKTPPQIYFKKKKTGGIS--EKLCYQILHEYKIHNAEVLFRENATVDDFIDVIEGNRKYIKCVYVYNKIDVVGIDDVDRLSIVISCNLKLNLDRLLARMWDEMGLVRVYSKPQGQQPDFDEPFVLSSDRGGCTVEDFCNHVHRTLVKDMKYALVWGTSTRHNPQNCGLSQHLEDE................................................................................................................................................................................................................................................................................................................................................................................................. 359
13 -18.200[R] KOG1489 Predicted GTP-binding protein (ODN superfamily)  ali follow..  20  342.....LGLIGLPNAGKSTILNKISNAKPKIGHWQFTTLSPTIGTVSQDVFTVADIPGI--IQGASLDKGMGLEFLRHERSNGWVFVLDLSNLIEEVGTLEKVKT--KNILIVCNKVDIDAEKSKYLQVEKFSKSQEWDCVPISALREKT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 499
14 -18.000[U] KOG0090 Signal recognition particle receptor, beta subunit (small G protein superfamily)  ali follow..  17  54.KSNTVLLSGLSGSGKTVLFYQLRDGSSHQGAVTSMEPNEGTKKGKVKPVHLIDVPGHSRLISKLEEYL--------PRAAAVVFVVDALEFLPDILTNASVIKNKTPVLLCCNKTDKVTAHTKEFIRKQMEKEI................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. 198
15 -17.700[R] KOG0075 GTP-binding ADP-ribosylation factor-like protein  ali follow..  13  19.EEMELTLVGLQFSGKTTFVNVIASGQFAEDMIPTVGFNMRKITRGNVTIKVWDIGGQPRFRSMWER----------RGVNAIVYMVDAADLDKLEASRNELHSLGIPVLVLGNKRDLPGA----LDETGLIERMNLSCYSISCKEKDNIDITLQWLIQHSKSQSR.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. 186
16 -16.800[R] COG0536 Predicted GTPase  ali follow..  20  162.....VGLVGFPSAGKSSLISVMSAAKPKIGDYPFTTLQPNLGNVGHETFTMADVPGL--IPGASEGKGLGLDFLRHERTSVLVHVVDTATLEAELAAYQSALDSQRPRLVVLNKADVPEAEEAEFLKEDIEKQFGWPVFIISAVARKGLDPLKYKLLEIVQDARKK................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. 346
17 -16.500[R] KOG0074 GTP-binding ADP-ribosylation factor-like protein ARL3  ali follow..  18  16.QEVRILLLGLDNAGKTTLLKQLAS-EDISHITPTQGFNIKSVQSQGFKLNVWDIGGQRKIRPYWKN----------ENTDILIYVIDSADRKRFEETGQELAELCVPVLIFANKQDLLTA----APASEIAEGLNLHIQSCSALTGEGVQDGMNWVCKNVNAKKK.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. 182
18 -16.400[J] COG0012 Predicted GTPase, probable translation factor  ali follow..  19  1...MEIGVVGKPNVGKSTFFSAATLVDVEIANYPFTTIDANVGVTY-IPVKMIDVAGL--VPGAHEGRGLGNKFLDDRMASALIHVVDIEFLEREIDFASEIRRINKPMIIAANKADAASEEQIN-RLIKEGEKRGYIVVPTSAAAELTLRKAAKA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ 263
19 -16.400[U] KOG0072 GTP-binding ADP-ribosylation factor-like protein ARL1  ali follow..  20  16.REMRILILGLDGAGKTTILYRLQ-VGEVVTTIPTIGFNVEQVTYKNLKFQVWDLGGQTSIRPYWRC----------SNTDAIIYVVDSADRDRIGISKDELLYMGAILVVLANKQDMDGC----MTVAEVHHALGLEIFKTSATKGEGLDQAMDWLSNTLQSRK................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 181
20 -16.300[U] KOG0071 GTP-binding ADP-ribosylation factor Arf6 (dArf3)  ali follow..  17  20.KEMRILMLGLDAAGKTTILYKLK-LNQSVVTIPTVGFNVETVTYKNIKFNVWDVGGQDKIRP------LWRHYF--TGTKGLIFVVDSADSNRISEARQELHRIDCLLLVLANKQDLPGA----LSPAQITDVLQLDVQPTCALTGDGLLEGLAWLSQNAKLK.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 184
21 -16.300[U] KOG0070 GTP-binding ADP-ribosylation factor Arf1  ali follow..  18  16.KEMRILMVGLDAAGKTTILYKLK-LGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRH----------QNTQGLIFVVDSNDRDRVVEARDELHRMDAVLLVFANKQDLPNA----MNAAEITDKLGLHIQSTCATSGEGLYEGLDWLSNNIASKA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 181
22 -16.300[U] KOG0077 Vesicle coat complex COPII, GTPase subunit SAR1  ali follow..  18  19.KEAKILFLGLDNAGKTTLLHMLKD-ERLVQHQPTQHPTSEELSIGKIKFKAFDLGGHQIA------RRVWKDYY--AKVDAVVYLVDAYDKERFAESKRELDALTVPFLILGNKIDIPYA----ASEDELRYHLGLTVFMCSIVRKMGYGEGFKWLSQYIN...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 193
23 -16.300[R] COG2229 Predicted GTPase  ali follow..  19  1MRENKIIFTGPVGVGKTTAIAAISASDMTLDRKRNTTVAMDYGAIEDTKVHLYGTPG--------QERFNFMWEILSQGSMGLVLLLDNARTNPLKDLEFFLHSFKAPVVVGITKMDIRSQPGIDVYHKYLKHNLNVPVFEIDARKEDDVKQLVSAMLFSIDPG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 175
24 -16.300[R] COG0486 Predicted GTPase  ali follow..  18  226.EGMKVVIAGRPNAGKSSLLNALAGREAAVTDIAGTTRDVLREHIDGMPLHIIDTAGLREATDEVERIGIVRAWSEIEQADRILLMLDSTE-EKVRSEFLTKLPSNIPVTIVRNKADLSGEN------EGIVEQNGYTVITLSAKTQQGIALLREHLKQSMGYQTNMARRRHLEALEQAATHLQQGHVQLTQFYAGELLAEELRRVQNHLSEITGQFTSDDLLGNIFSS................................................................................................................................................................................................................................................................................................................................................................................................................................................... 460
25 -16.100[UZ] KOG0073 GTP-binding ADP-ribosylation factor-like protein ARL2  ali follow..  17  15.RELRLLMLGLDNAGKTTILKKFNG-EDIDTISPTLGFNIKTLEHRGFKLNIWDVGGQKSLRS------YWRNYF--ESTDGLIWVVDSADRQRMQDCQRELQSLGATLLIFANKQDLPGA----LSSNAIREALELDIQGCSAVTGENLLPGIDWLLDDISSR.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 179
26 -16.100[R] COG1100 GTPase SAR1 and related small G proteins  ali follow..  18  17.KELRILILGLDGAGKTTILYRLQ-IGEVVTTKPTIGFNVETLSYKNLKLNVWDLGGQTSIRPYWRC----------ADTAAVIFVVDSTDKDRMSTASKELHLMDAALLVFANKQDQPGA----LSASEVSKELNLVIVASSAIKGEGITEGLDWLIDVIKEEQ................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 182
27 -15.400[J] KOG0466 Translation initiation factor 2, gamma subunit (eIF-2gamma; GTPase)  ali follow..  12  39QATINIGTIGHVAHGKSTVVKAISGVDPSCPRPECYRSCGSSMPDEVRHVSFVDCPG---------HDILMATMLNGAVMDAALLLIAGNE-TSEHLAAIEIMKLK-HILILQNKIDLVKERQAKEQYEQILAFVGAPIIPISAQLKYNIEVVCEYIVKKIPVPPRDFTSEPRLIVIRSFD................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 263
28 -15.300[U] KOG0076 GTP-binding ADP-ribosylation factor-like protein yARL3  ali follow..  22  16.EQYSILILGLDNAGKTTFLETLKKEYEKIQPTVGQNVATIP---SKQILKFWDVGGQESLRS------MWSEYY--SLCHGIIFIVDSSDRERLDECSTTLQSVGVPILMLANKQDRQDR----MEVQDIKEVFNKIVLPISALTGEGVKDAIEWMIVRLERNKK.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. 191
29 -15.300[J] KOG1191 Mitochondrial GTPase  ali follow..  20  352.SGLQIAIVGRPNVGKSSLLNAWSKSERAVTEVAGTTRDVVEANVRGVPITLLDTAGIRETNDIVEKIGVERSETAAKVADVIIMAVSAVE-EEDTELLRKIQS-KQPMILVMNKIDCAPPGSCDLEDQRKKEEVFHKSVFTSAVTGQGIEELEDAILEILGGHQWTVNQRQCEQLVRTKEALVRLREAIEDEIPIDFWTIELREAALSLAQISGQDVSEEVLSSIFAK................................................................................................................................................................................................................................................................................................................................................................................................................................................... 608
30 -14.800[R] COG2262 GTPases  ali follow..  17  199....TVSLVGYTNAGKSTLFNRITEARVYAADQLFATLDPTLRRIDVGETVLADTVGFIRHLPHDLVAAFKATLQETRQATLLLHVIDAADVQENIEAVNTVLE-EIPTLLVMNKIDMLEDFEPRIDRDEENK----IRVWLSAQTGAGIPQLFQALTERLSGEVAQHTLRLPPQEGRLRSRFYQ............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 385
31 -14.500[J] COG5257 Translation initiation factor 2, gamma subunit (eIF-2gamma; GTPase)  ali follow..  16  4QSEINIGLVGHVDHGKTTLTKALSGVTHSEETKRGISIRLGYADITLRKVSFVDAPG---------HETLMATMLSGALMDGAILVIAANE-TKEHLMALDVIGVK-DVIVVQNKIDIVSKERALESYREIKEFVDAPIIPVSAQQGANIDILIETIEERIKTPKRDVDKPARMYVARSFD................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 217
32 -14.000[R] KOG0410 Predicted GTP binding protein  ali follow..  16  311....VVSLVGYTNAGKSTLLNQLTGANVLAENRLFATLDPTTRRVNGKEFLLTDTVGFIQKLPTTLVAAFRATLEEIAESSLLVHVVDISHAEQQIEAVEKVMS-SIPKLVVWNKVDRVDDP----QKVKLEAEETGDTICISALTGEGLDDFCNAVHEKLKDSMVWVEALLPFDKGDLLSTIHKVGMVKETEYTENGTLIRA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................. 514
33 -13.800[J] COG4108 Peptide chain release factor RF-3  ali follow..  14  14.KRRTFAIISHPDAGKTTITEKVGRAIQVAGT--GISVTTSVMQFGDCLVNLLDTPGHEDFSEDTYRTLTAV--------DSCLMVIDAAK-DRTRKLMEVTRLRDTPIVTFMNKLDREIRDPMEL-MDEVENELKIACSPICGKEFKGVYHIHRDETILYTSGQGHTIQEERIIKGLDNPELDQAVGAD--------LAAQLREELELVLGASHEFDRELFLQGELTPV---FGTALGNFGVDHMLDGLTQWAERVVEASEEKFTGFVFKIQANMDPKHRDRIAFVRIVSGTYKQGMKMNHVRLGKQVNISDAVTFMAGDRARAEEAFAGDIIGDTFTQGETLKFTGIPNFAPELFRRIRLRDPLKQKQLLKGLVQLSEEGAVQVFRPLQNNDLIVGAVGVLQFDVVVSRLKSE......................................................................................................................................................................................................................................................... 458
34 -13.600[J] KOG0460 Mitochondrial translation elongation factor Tu  ali follow..  16  52.PHVNIGTIGHVDHGKTTLTAAITKCLSDLGQ--GITISSAHVEYENRHYAHVDCPG---------HADYIKNMITGATMDGAIIVVSATD-TREHLLLARQVGVK-QIVVYINKVDMVEPDMIELVEMEMRELLGDNTPIVSGSALCALEGREPEI........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 226
35 -13.500[M] COG0481 Membrane GTPase LepA  ali follow..  24  1MKNIRFSIIAHIDHGKSTLSDRLCGGSMDLERERGITIKAQSVTLETYQLNFIDTPGHVDFSY-----EVSRSL---AACEGALLVVDAGQEAQTLANCYTAIEMNLEVVPILNKIDLADPERVAEEIEDIVGIDAMEAVRCSAKTGVGIEDVLEEIVHKIPAPE................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 184
36 -13.400[R] KOG0395 Ras-related GTPase  ali follow..  15  18.NSYRMVVLGASRVGKSSIVSRFLNGRFEDQYTP--TIERKVYNIRGDQLDILDTSGNHPFPAMRRLSILTGDVFI-----LVFSLDNRESFDEVKRLQKQILEVELPMVICGNKNDHGELC--QVPTTEVSGDENCAYFEVSAKKNTNVDEMFYVLFSMAKLPHE.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. 195
37 -13.400[R] KOG1491 Predicted GTP-binding protein (ODN superfamily)  ali follow..  13  19.NNLKAGIVGLANVGKSTFFQAITRCPGNPANYPFATIDPEEARVI-AHLTVYDIAGL--TKGASAGEGLGNAFLSHRSVDSIYQVVRCFD--------------DAEIIHVEGDVDPVR------DLEIINQELRLKDIEFAQKALEGAEKIAKRGGQSLEVKQKKEEMDLITKIIKLLESGQRVANHSWTSKEVEIINSMFLLTAKPCI-YLINLSERDYIRKKNKHLLRIKEWVDKYSPGDLIIPFSVSLEERLSHMSPEDAEEELKKLQTISALPKIITTMRQKLDLISF---FTCGPDEVREWT-----------IRRGTKAPQAAGVIHNDLMNT------------------FILAQVMKCEDVFEYKDDSAIKAAGKLMQKGKDYV--IIYFRAGAGK.................................................................................................................................................................................................................................................................. 393
38 -13.400[R] COG5258 GTPase  ali follow..  19  105PPTVTVVALGNVDAGKSTLVGVLTTGRLDDGK-TGRTSAVSLRLLSDKLVLLVDVGG---------HERYLRTALFSSQPDYVMLVVAANSTKEHLGIAVAI---GIPVFVVVTRIDITPSEVFQKTVEEVVRILKAPVFYVSSVTGHGLDLLLRFLSLLPRRRRWDYGGEFLMYISDIYL................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 348
39 -13.100[R] KOG2485 Conserved ATP/GTP binding protein  ali follow..  17  140.PTLLVMVVGVPNVGKSALINSIHQIAATVGPLPGVTQDIAGFKIHRPSIYVLDSPGV--LVPSIPDIETGLKLALSGS--VKDSVVGEERIAQYF---LAILNIRGTPLHWKYLVEGINEGPHADCIDKPSYNLK................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ 280
40 -12.900[S] COG0700 Uncharacterized membrane protein  ali follow..  16  9.............................................................................................................................................................................................................................................................................................................................................VMDMFIDGARRGFTATTNLLPNVVMAFVIIQALKITGLLDWVGHICQPVMALWGLPGEAATVLLASLMSMGGAVGVAASLATAGGHDVTVLLPAIYLMGNPVQNVGRCLGTAEVNAKYYPHIAVCAINALLSIWVMQLI................................................................................................................................................................................................ 152
41 -12.900[O] KOG0448 Mitofusin 1 GTPase, involved in mitochondrila biogenesis  ali follow..  11  74.RHMKVAFFGRTSSGKSSVINAMLWDK-EGTDGDKAYLMTEGSDLLRDDLVLVDSPG---TDVTTELDSWIDKFC--LDADVFVLVANSES-EKHFFHKVNEWLSKPNIFILNNRWDASASEPEYMEDVRRQHMERCRIFFVSAKEVLSARKQKAQGMPESGVALAEGFHARLQEFQNFEQIFEECISQSAVKTKFEQHTIRAKQILATVKNIMDSVNLAAEDKRHYSVEEREDQIDRLDFIRNQMNLLTLDVKKKIKEVTEEVANKVSCAMTDEICR.................................................................................................................................................................................................................................................................................................................................................................................................. 419
42 -12.300[J] KOG0462 Elongation factor-type GTP-binding protein  ali follow..  12  44....NFGIVAHVDHGKSTLADRLCGAVPPGQK--GITVKAQTAAHRGYLLNLIDTPGHVDFSA-----EVSRSL---AVCDGILLLVAANQQAQTIANFWLAFEKNIQIIPVINKIDLADIKSVETQLKNLFEFNPEECLHISAKSGLNVDKVLEAIIDRVPAPTAIIDAPFRSMI----------FDSYFDHFRGAIAHIMVKEGSVKKGDKIQSYQNEKVYDVSEVGVMRPEMVKCTELRAGQVGYLVCNMRTVNEAVVG----------ETLFAETTSRDSVKTFAEIKGVKPTVYAGLFPVETSDYESLKQAVERLCLNDPSVTVIPDSSKALGLGWRIGFLGVL------------------------HMEVFGARLSQEYDAS----------VILCQPSVEYRAKIKDNETIRKKR-----ILDPSKFPDESDVDSFLEPMVKVRMIVPNEMMGTVNGLCSECRGERGEITSIDSTRLVIL--WRLP-LAEVAVDFFERLKKLTSGYASFILINSKEVSEFSQIIPAAMARDRAKILVQRLKREIPTIKACIGSSTKALSQIVIQPM-KRDFSQLLKGNFGGGGMERLNKKLSHQKKGKERMKMV----VQIPKEAFLNVLKR.................................. 645
43 -12.100[J] KOG0468 U5 snRNP-specific protein  ali follow..  11  133....NVALVGHLHHGKTTFVDCLTHPQFETME--GCSIKATPVTLKSYLLNIFDTPGHVNF---SDEATAAMRMS-----DGVVLFIDAAEMLNTERLLKHAVQERQAITVCINKIDRLILE-LKLPPQDAYFKLKHIVEEVNG----STYGAPDDNLLVSPILGNVCFASSLYGFCFTLKSFAKLYADTYEGVAYLDFA-KRLWGDMYFNSKTRKFSKKQPHNSAQRSFVE--------FILEPMYKLIAQVVGDVDTTLSDTLAELNVRVSKEEMKS--IRPLLRLVCNRFMGDCSGFVDMCVEHIKSPL------------NAKRKVDHIYTGPKEGDIYRDMISCNQYGTLMVHSSKMYPNDDCTFFQVLARIVSGTLHA----------------GQEVRVLGENYTLQDEEDRILQVGRLWVFESRYKVELNRVPAGNW-----------VLIEGIDQCIVKTSTIVDIN-VPEDLYIFRPLKFNTQSIIKIAVEPVNPSELPKMLDGLRKVNKSYPLLST--------RVEESGEHVILGTGELLDCVMHDLRKMYSEIDIKVADPVVACETVVETSSLKCFAETPNKKNKITMISEPL.......................................................... 695
44 -11.800[J] KOG1145 Mitochondrial translation initiation factor 2 (IF-2; GTPase)  ali follow..  13  179.RSPVVTIMGHVDHGKTTLLDKFRKTQVAAVETGGIT--QHIGAFSGEKITFLDTPGHAAFSAMRARGAQVTDIV------VLVVAADDGVMKQTVESIQHAKDAQVPIILAVNKCDKAEADPEKVKKELLAYDVDVQAVPVSALTGDNLMALAEATAEMLELKADPNGPVEGTVIESFTDK--KTIDEAYPSMPVGITGWRDLPSAGEEILEVESEPRAREVVDWRKYEQEQEKGQEDLKIIEEKRKEHKEAHQKAREKYGHLLWKKRSILRFLERKEQIP----------KPKEKRERDSNVLSVIIKGDVDGSVEAILNIIDTYDASHECELELVHFGVGDISANDVNLAETFDGVIYGFNVAAKKGVKIKLHKIIYRLVEDL-PVGEASILATVTEGKKKVPVAGCRVQKGQLEKQKKFKLT.............................................................................................................................................................................................................................................. 662
45 -11.800[T] KOG4252 GTP-binding protein  ali follow..  14  10...IKMVVVGNGAVGKSSMIQRYCKGIKDYKKTIGVDFLERQIQVNDEDVRL-----LWDTAGQEEFDAITKAYY--RGAQACVLVFSTTDRGSFEAVSSWREKVDIPTVLVQNKIDLLDDSCIKNEAEALAKRLRLRFYRTSVKEDLNVNEVFKYLAEKYLQKLK.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. 174
46 -11.800[U] KOG0096 GTPase Ran/TC4/GSP1 (nuclear protein transport pathway), small G protein superfamily  ali follow..  14  13...FKLVLVGDGGTGKTTFVKRHLTGEFEKKYIATIGVEVHPLSFGEIKFDVWDTAG--------QEKFGGLRDGYYINAQCAIIMFDVTSRITYKNVPNWHRDLNIPIVLCGNKVDVKERKVKA-KTITFHRKKNLQYYDISAKSNYNFEKPFLWLARKLAGNPQLEFVASPALAPPEVQ................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 190
47 -11.800[R] KOG2484 GTPase  ali follow..  13  266.TSIRVGVVGIPNVGKSSIINSLTRGRSMVGSTPGVTKSMQEVELD-SKIKLIDCPGIVFTSGGENSHAVLKNAQVKDPFTIAESVLKRAS-KEYFCTMYDITNYDTFFFAKKAARMGKFLKKGVPDVVAAARKIKYCTQPPEVQEGQSVHISASIVHSEAREFDVENFESMETEILEHCAVKTDDIMEITSTGPLEIRQPREEAEPADKITASLVIDEKEKPAKGRKRKLDEEKEKVDPSLLLEENQSLNKGIKQMQKLKKKQNVRNEKKISKI..................................................................................................................................................................................................................................................................................................................................................................................................... 553
48 -11.700[T] COG1217 Predicted membrane GTPase involved in stress response  ali follow..  18  2IENLRIAIIAHVDHGKTTLVDKLSGTSNDQEKERGITILAKNTAWNGYNINIVDTPGHADFGG-----EVERVMSM----DSVLLVVDAQDMPQTRFVTQKAFKAGLRPIVVVNKIDRARPDWVIDQIFDLFDNLGATDEQLDFPIVYASA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. 167
49 -11.600[R] KOG0080 GTPase Rab18, small G protein superfamily  ali follow..  18  9...LKILIIGESGVGKSSLLLRFTDDTPELAATIGVDFKVKTISVDGNKAKL-----IWDTAGQERFRTLTPSYY--RGAQGVILVYDVTRRDTFVKLDNWLNELDIVNMLVGNKIDKENREVDRNEGLKFARKHSMLFIEASAKTCDGVQCAFEELVEKIIQTPG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. 174
50 -11.500[R] KOG1673 Ras GTPases  ali follow..  14  102...LKISLLGDCQTGKTTFVVKYVGDEQSFLEMTGLNLMDKTFYVQGVTISIWDVGG---------DEKRSKDHI--KDAVAILFMFDLTSRSTLNSVFGWYSQATAIPILIGTKFDDFVRLPPNLQARAYAKVMNASLFFSSATHNINVNKIFKFILARL....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 266
51 -11.500[J] COG0050 GTPases - translation elongation factors  ali follow..  14  11.PHVNVGTIGHVDHGKTTLTAAITTVLAKTYG--GITINTSHVEYDARHYAHVDCPG---------HADYVKNMITGAQMDGAILVVAATD-TREHILLGRQVGVP-YIIVFMNKCDMVDDEELELVEMEVRELLGDDLPVVRGSALKALEGEAEWEAKIIE...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 191
52 -11.500[U] KOG0093 GTPase Rab3, small G protein superfamily  ali follow..  18  23...FKILIIGNSSVGKTSFLFRYADDSFTPAFVSGIDFKVKTIYRNDKRIKL-----IWDTAGQERYRTITTAYY--RGAMGFILMYDITNEESFNAVQDWSTQINAQVLLVGNKCDMEDERVVSSE-RQLADHLGFEFFEASAKDNINVKQTFERLVDVICEKMS.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. 188
53 -11.500[S] COG3366 Uncharacterized protein conserved in archaea  ali follow..  11  3.................................................................................................................................................................................................................................................................................................................................................YSLIFSEAMKLFSIMLPMIFIGFFLSNLLRATRYLEYTSIPMASITEMARLPKTCSSVLTFFFLNSWSGMGMLSSF-GERDVIVTVLIAQLPKGLHSAIFFQAVALAVLGYEIGLLLLFLELLVFAGIAVAGIFIGRKILFKNPSEHGDNTEL-KETGCIARAGAVLQKSFHEFGKVALVLVPTTFLFIII-----------LNLGLAEYSAETLQPLMNPLRLPD-AAVIVFAASFLSQIAVLSAAGTIVVIEQITVLQCLEMLFIARVLHLGIGYVKTSLPTNIALFGRK----GLRVTCVEGFMVETGLTCIVLLLIILQTY.. 328
54 -11.500[U] KOG0092 GTPase Rab5/YPT51 and related small G protein superfamily GTPases  ali follow..  14  21...FKLVLLGESAVGKSSLVLRFVKGQFHEFQESGAAFLTQTVCLDDTKFEIWDTAG--------QERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELNIVIALSGNKADLANKRAVDFEAQSYADDNSLLFMETSAKTSMNVNEIFMAIAKKLPKNEP.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. 186
55 -11.500[TU] KOG0084 GTPase Rab1/YPT1, small G protein superfamily, and related GTP-binding proteins  ali follow..  17  9...FKLLLIGDSGVGKSCLLLRFADDSDSYISTIGVDFKIRTVEQDGKTIKL-----IWDTAGQERFRTITSSYY--RGAHGIIVTYDVTDLESFNNVKQWLNEINVNKLLVGNKCDLTSQKVVSTEAKAFADELGIPFLETSAKNATNVEEAFMAMTAAIKTRMA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. 174
56 -11.400[OK] COG0378 Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase  ali follow..  13  3.RPLIIGVGGPVGAGKTMLIERLTRYLSTKGYSMAAAIEEMCDKHPDLQLLFLESGGD-----------NLSATFSPDLVDFSIYIIDVAQGEKIPRKGGQGMIKS---LFIINKVDLAPYVGANVEVDTLKSRGNKDFFVTNLKTDEGLKSVADWIEKRLQ...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 200
57 -11.400[R] KOG0079 GTP-binding protein H-ray, small G protein superfamily  ali follow..  17  11...FKLLIIGDSGVGKSSLLLRFADNTENYITTIGVDFKIRTMDINGQRVKL-----IWDTAGQERFRTITSTYY--RGTHGVVVVYDVTNGESFGNVKRWLQEISVQKVLVGNKCEENERRVVLESARNYAQSMNISFFETSAKEDKNVEPMFTCITSLVLTAKL.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. 175
58 -11.300[TU] KOG0078 GTP-binding protein SEC4, small G protein superfamily, and related Ras family GTP-binding proteins  ali follow..  17  10...IKLLLIGDSGVGKSCLLLRFSEDSPSFITTIGIDFKIRTIELDGKRIKL-----IWDTAGQERFRTITTAYY--RGAMGILLLYDVTNVRTWFSNVEQHASENVYKILIGNKCDCEDQRQVSFEQQALADELGVKFLEASAKTNVNVDEAFFTLAREIKKQ.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 173
59 -11.300[U] KOG0094 GTPase Rab6/YPT6/Ryh1, small G protein superfamily  ali follow..  14  10...YKLVFLGDQSVGKTSIITRFMYDKFDTTYQAGIDFLSKTMYLEDRTVRL-----LWDTAGQERFRSLIPSYI--RDSSVAVVVYDVANRLSFLNTSKWIEEVDVIIVLVGNKTDLVEKRQVSIEGDSKGREYGVMFIETSAKAGFNIKPLFRKIAAALPGMES.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. 175
60 -11.300[U] KOG0095 GTPase Rab30, small G protein superfamily  ali follow..  19  10...FKIVLIGNAGVGKTCLVRRFTQGLFPPGQGAGVGFMIKTVEINGEKVKL-----IWDTAGQERFRSITQSYY--RSANALILTYDITCEESFRCLPEWLREIKVITVLVGNKIDLAERREVSQQAEEFSEAQDMYYLETSAKESDNVEKLFLDLACRLISEAR.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. 175
61 -11.300[R] KOG0088 GTPase Rab21, small G protein superfamily  ali follow..  15  13...FKIVLLGEGCVGKSSLVLRFVENKFSCKHLSQASFQNKTVNVEDCQADL-DTAG--------QEKYHALGPIYYRGSNGVLLVFDITDRKSFEKVKNWVLEITAEILIVGNKIDLEEERQVTRDAEAYAESEGALYMETSAQDNVGISDAFESLTAKMIEHSR.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. 178
62 -11.300[J] COG3276 Selenocysteine-specific translation elongation factor  ali follow..  18  1...MIIVTSGHVDHGKTALLKALTGTHLPEEKKRGMTIDLGYAYLPNKVLGFIDVPG---------HEKFLSNMLAGGGVHYAMLIVAADE-TKEHLAILRQLQFHE--IVVITKADRTNSAQIESLIQTIKQDYNANYFVTSAETGQGISELRHYLANLAELADT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. 167
63 -11.300[R] KOG0083 GTPase Rab26/Rab37, small G protein superfamily  ali follow..  16  470....KVIMLGDSGVGKTSLLIRFRDGRYVPSYFLGIDFRNKVVVVDGTRVKL-DTAG---------QERVTHAYY--RDAHALLLLYDVTNKTTYDNIRAWLGEIDVVIVLIGNKADCSGSERQ--DGERLGREHNVPFMETSAKTGLNVELSFTAVARQLKSRGYEHGDDGKFNVHDFVRDNTK............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 655
64 -11.200[TU] KOG1954 Endocytosis/signaling protein EHD1  ali follow..  12  91.AKPMILLVGQYSTGKTTFIRYLLESDIRIGPEPGDEEGSIPGNA--ESVTIVDTPGILSGEKQRIDRGYDFTGVLEERVDRIILLFDAHKLDIS--CIEALAGNEDKIRIVLNKSDMVDHQQLMRVYGALMWSLGVSRVYLGSDEQHDLFQDLQALPRNAALRKLNDLIKRARLAKVHAYIIAELRKQMPSMIGKDKKKKDLIQNLDKIYEQLQREHNISPGDFPDVNKMREKLQTQDFSKFNPLKPKLLEVVDGMLATDIARLMAQIPKEEAAAPAGSNGSADPTVRGGAFSQTTEAETPFGFGRGEGFDKGADEAEWVVSRERTTADSTFESLGPVNGYLSGRAAKEHMVNSVLGKVWKLADIDKDGQLDADEFALANYLINLKLEGHE-----------IPSELPKHLIPPSKRGEQDPVYPSLNDNDE....................................................................................................................................................................................................................................... 589
65 -11.200[K] KOG1534 Putative transcription factor FET5  ali follow..  16  1MVKVAAFVCGVASSGKSTFCGALMGRSCHLVN-PAISIDDVMEELDDEDYLIFDMPGQIELYTHVPILPALIRHLQVTLN-CAVYLLESQFFAGVLSAMSAMVMMEVPHINLLSKMDLLKDNNNI-KFHELNRCI-VNFLPLESGNEESVSRVLSYIDDATQ...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 254
66 -11.000[U] KOG0086 GTPase Rab4, small G protein superfamily  ali follow..  18  9...FKFLVIGSAGTGKSCLLHQFIENKFKQDSNHGVEFGSRVVNVGGKTVKL-----IWDTAGQERFRSVTRSYYRGAA---ALLVYDITSRETYNSLAAWLTDANIVVILCGNKKDLDPEREVTFEASRFAQENELMFLETSALTGENVEEAFLKCARTILNK.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 172
67 -11.000[R] KOG1424 Predicted GTP-binding protein MMR1  ali follow..  12  385.GQLTVGLVGYPNVGKSSTINTIMGNKKSVSATPGHT-KHFQTLYVEPGLCLCDCPGL-----------VMPSFVSTKAEMTCSGILPIDQM-RDHVPPVSLVCQNIPRHVLEATYGINEDPHRPPTSEELLTAYGYMRGFMTAHGQPDQPRSARYILKDYVSGKLLYCHPPPGRDPVTFQHQHQRLLENKMNSDEIKMQLGRNKKAKQIENIVDKTFFHQENVRALTKGVQAVMGYKPGSGVVTASTASSE--GAGKPWKKHGNRNKKEKSRRLYKH.................................................................................................................................................................................................................................................................................................................................................................................................. 655
68 -11.000[U] KOG0097 GTPase Rab14, small G protein superfamily  ali follow..  18  12...FKYIIIGDMGVGKSCLLHQFTEKKADCPHTIGVEFGTRIIEVSGQKIKL-----IWDTAGQERFRAVTRSYYRGAA---ALMVYDITRRSTYNHLSSWLTDANTVIILIGNKADLEAQRDVTYEAKQFAEENGLLFLEASAKTGENVEDAFLEAAKKIYQNIQ.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. 177
69 -10.900[R] KOG1533 Predicted GTPase  ali follow..  19  31WTMYGVLVIGAPGAGKSTFCAGLTKRPFLTIN-PAITVNDVMDRLGHKKYLIIDCPGQLELYKSEGELWKVIRFLEKSGVRLALHLADSLYISVALSTLATMVTMEMPQVNCLSKADLFSEDGTY-KYRKLNEAI-VSFVPLAVENKESMMKVIQMVDAANG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 282
70 -10.900[L] KOG1532 GTPase XAB1, interacts with DNA repair protein XPA  ali follow..  17  40.KPIIIIVVGMAGSGKTSFLHRLVKSHGYVVN-PAVMVSVIEKRADQLDYVLVDTPGQIEIFTWSASGAIITEAFASTFPTVVTYVVDTPRMSNMLYACSILYKTRLPLVLAFNKTDVADHKFASLSLSLYEFYRNIRSVGVSAISGAGMDGFFKAIEASAEEYMETYKADLDMRKERKKHEMEKLRKDMESSQGGTVVLNTGLKDRDATEKMMLEEDDEDFQVEDEEDSDDAIDEDDEDDETKHYY................................................................................................................................................................................................................................................................................................................................................................................................................................. 378
71 -10.800[U] KOG0098 GTPase Rab2, small G protein superfamily  ali follow..  16  7...FKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLGVEFGARMVTIDGKQIKL-----IWDTAGQESFRSITRSYYRGAA---ALLVYDITRRDTFNHLTSWLEDANMVIMLIGNKSDLEARREVKREGEAFAREHGLVFMETSAKTAANVEEAFIDTAKEIYRK.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 170
72 -10.800[J] KOG0469 Elongation factor 2  ali follow..  11  21....NMSVIAHVDHGKSTLTDSLVSKAGIIAG--CITIKSTAISLNGFLINLIDSPGHVDF---SSEVTAALRVT-----DGALVVVDCVS-VQTETVLRQAIAERIKPVLFMNKMDRALLE-LQLGAEELFQTFQRIVENINVTYGDDDGPMGPIMVDPSIGNVGFGSGLHGWAFT-------------LKQFAEMYAGKFGVQVDKLMKNLWGDRFFDLKTKKWSSTQTDESKRGFCQFVLDPIFMVFDAVMNIKKDKTAALVEKLGIKLANDEKDL-------KPLMKVFMRKWLPAGDTMLQMIAFHLPSPV--------AQKYRMEMLYEGPHDDEAAVAIKTCDPNGPLMMYISKMVPTSDKGRFYA-----FGRVFSGKVATGMKARIQ--------PNYVPGKKEDLYEKTIQRTIL---MMGRFIEPIEDIPSG----------------IAGLVGVDQYLVKGGTITTYKDAHNMRVMKFSVSPVVRVAVEAKNPADLPKLVEGLKRLAKSDPMVQC--------IFEESGEHIIAGAGELLEICLKDLEEDHACIPLKKSDPVVSRETVQSESNQ.............................................................................. 583
73 -10.800[R] KOG0394 Ras-related GTPase  ali follow..  19  9...LKVIILGDSGVGKTSLMNQYVNKKNQYKATIGADFLTKEVQFEDRLFTL-----IWDTAGQERFQSLGVAFY--RGADCCVLVYDVNSMKSFENLNNWREEFNFPFVLIGNKVDVDDGNSRVVSEKKAKAWCNIPYFETSAKVGTNVEEAFQCIAKDALKSGEEEELYLPDTID....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 192
74 -10.800[U] KOG0087 GTPase Rab11/YPT3, small G protein superfamily  ali follow..  15  11...FKTVLIGDSGVGKSNLLMRFTRNEFNIESKSGVEFATRNIVLDNKKIKA-----IWDTAGQERYRAITSAYYRGAV---ALIVYDITNVGRWLKELREHADSNIVIMLVGNKTDLLHLRAVSTEAQAFAAENNLSFIETSAMDASNVEEAFQTVLTEIFRIVS.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. 176
75 -10.700[U] KOG0081 GTPase Rab27, small G protein superfamily  ali follow..  17  10...IKFLALGDSGVGKTSVLYQYTDGKFNSKFITTVGIDFREKRVQRIHLQLWDTAGQERF------RSLTTAFF--RDAMGFLLLFDLTNEQSFLNVRNWISQLNPDIVLCGNKSDLEDQRVVKEEAIALAEKYGIPYFETSAANGTNISQAIEMLLDLIMKRME.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. 186
FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Plewczynski D, Tkacz A, Wyrwicz LS, Godzik A, Kloczkowski A, Rychlewski L. Support-vector-machine classification of linear functional motifs in proteins. J Mol Model 2006 Aug;12(4):453-61. Epub 2005 Dec 10.