FFAS03 results for COG0705

Query: [R] COG0705 Uncharacterized membrane protein (homolog of Drosophila rhomboid), from VFDB

Results of FFAS03 search in VFDB
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.

						`. 10 . 20 . 30 . 40 . 50 . 60 . 70 . 80 . 90 . 100 . 110 . 120 . 130 . 140 . 150 . 160 . 170 . 180 . 190 . 200 . 210 . 220 . 230 . 240 . 250 . 260 . 270 .`
#	Score	Template	Links and tools	%id	First	`MLMITSFANPRVAQAFVDYMATQGVILTIQQHNQSDIWLADESQAERVRGELARFIENPGDPRYLAASWQSGQTNSGLRYRRFPFLATLRERAGPVTWIVMLACVLVYIAMSLIGDQTVMVWLAWPFDPVLKFEVWRYFTHIFMHFSLMHILFNLLWWWYLGGAVEKRLGSGKLIVITVISALLSGYVQQKFSGPWFGGLSGVVYALMGYVWLRGERDPQSGIYLQRGLIIFALLWIVAGWFDWFGMSMANGAHIAGLIVGLAMAFVDTLNARKRT`	Last
1	-98.400	`[R] COG0705 Uncharacterized membrane protein (homolog of Drosophila rhomboid)`	`ali`	100	1	`MLMITSFANPRVAQAFVDYMATQGVILTIQQHNQSDIWLADESQAERVRGELARFIENPGDPRYLAASWQSGQTNSGLRYRRFPFLATLRERAGPVTWIVMLACVLVYIAMSLIGDQTVMVWLAWPFDPVLKFEVWRYFTHIFMHFSLMHILFNLLWWWYLGGAVEKRLGSGKLIVITVISALLSGYVQQKFSGPWFGGLSGVVYALMGYVWLRGERDPQSGIYLQRGLIIFALLWIVAGWFDWFGMSMANGAHIAGLIVGLAMAFVDTLNARKRT`	276
2	-48.800	`[T] KOG2980 Integral membrane protease of the rhomboid family involved in different forms of regulated intramembrane proteolysis`	`ali follow..`	13	145	`...............................................................................................LVYALLGINVAVFGLWQLPKCWRFLQ--YMLLQKDYVTSKISIIGSAFSHQEFWHLGMNMLALWSFGTSLATMLGASNFFSLYMNSAIAGSLFSLWYPKGPSLGASGALFGVLGCFSYLFPHAKILLFVFPVPGGAWVAFLASVAWCALRWGSFDYAAHLGGSMMGVLYGWYISKAVEKQR`	335
3	-48.600	`[T] KOG2289 Rhomboid family proteins`	`ali follow..`	17	63	`...............................................................................................PNKECVARFLGRFSFQPLKENPLF---ALEWRKVVHEHQGWRLLSCMWLHAGIIHLLTNMLSLIFIGIRLEQQFGFIRVGLIYLISGLGGSILSSLFLQSISVGASGALFGLLGAMLSELLTNWTIYANKAAALITLLFIIAINLALGML-PRVDNFAHIGGFLTGFCLGFVLLVRPQYGW`	251
4	-48.100	`[S] KOG2632 Rhomboid family proteins`	`ali follow..`	21	20	`..........................................................................................NAIPFLTSSVVVVCGVIYLICLLTGYDTFYEVCFLPSAIISRFQVYRFYTAIIFHGSLLHVLFNMMALVPMGSELERIMGSVRLLYLTVLLATTNAVLHLLIANECAIGFSGILFSMIVIETSLSGVTSRS-VFGLFNVPAKLYPWILLIVFQLLMTNVSLLGHLCGILSGFSYSY..........`	209
5	-45.600	`[T] KOG2290 Rhomboid family proteins`	`ali follow..`	16	609	`...............................................................................................ITSREYCDFMRGYFHEEATLCSQVHCMLLPFLNPEVPDQFYRLWLSLFLHAGILHCLVSICFQMTVLRDLEKLAGWHRIAIIYLLSGVTGNLASAIFLPRAEVGPAGSQFGILACLFVELFQSWQILARPWRAFFKLLAVVLFLFTFGLL-PWIDNFAHISGFISGLFLSFAFLPYISFGK`	794
6	-32.000	`[S] KOG4463 Uncharacterized conserved protein`	`ali follow..`	12	9	`...........................................................................................SNMGITKFLLLTISTSSVVAGVFALKPFFHI-NFGLHLLSHYQYWRILLWQFIYWNSTEVFQALFIIYQAR-DVERLLGSHRFASFCVYMFILGMFVTPIFSDYIQPGPTFLIFAIL-YQYYYIVPSTVFVRLFNIKFTDKFQMVIPMIGLAFSHFPSTFINAFLGWTMGMFY............`	188
7	-28.500	`[S] KOG2890 Predicted membrane protein`	`ali follow..`	13	14	`..................................................................................VERHSDVLRNNALPFRFLVVLRIIGYIISYL---HFARLLLWLHPYQIASIELWRIATSTFCGHNVLDVLWTVWCLHFGTNLVRLNNTNESLLKLYAITQGVTTFVIVVFAIEPLVGMTPICASVM---VLMKQFLPDTIVLA-AHLPFLAIFVSFILALTKFTYFVSFLQITIGVQVSWTY............`	210
8	-16.800	`[S] COG5291 Predicted membrane protein`	`ali follow..`	13	1	`..........................................................................MPSIPQMNNTFLLGQMLRVPPITRYMTLLISAVALLVYV--DAVSPYSLYYSPLFLKRLEIWRVFTSFLYFGKPLDMFMHVVFLYRYSRMLEEGCVNTSEYFWLILVISSVLFAISNIYGISALGTS-----SATITYIWTKRNPRAIVQIFGFIFPAFYLPFILPGFMLLSRRSISIDDVLGIVVGHLFHYF.........`	189
9	-13.300	`[S] KOG0858 Predicted membrane protein`	`ali follow..`	18	9	`...........................................................................................SLPRFTRYWLTATVVLSMLCRF-DVIPLHWLHLDRSAVFSKLQLWRCMTSLFVFPISFHFLINCFFIVQYSSKLEKDQYSRSYLYLLIVSAVLANIGGMIFNVYF---LMDTLVLAITYIWCQLNKDVTVSFWFGTRFKAMYLPWVLAAFEFIFHFSL---ASLVGIFVGHVYYFF.........`	184
10	-11.000	`[I] KOG3030 Lipid phosphate phosphatase and related enzymes of the PAP2 family`	`ali follow..`	13	99	`...............................................................................................................................................IYKAIGTFLFGAAASQSLTDIAKYSIGRLRFLDVGYIEYYICRGNAERVKEGRLSFYSGSSFSMYCMLFVALYLQARMKGDWARLLRPTLQFGLVAVSIYVGLSRVSDYKHLTGLIQGALVAILV........`	243
11	-9.470	`[R] COG3907 PAP2 (acid phosphatase) superfamily protein`	`ali follow..`	10	19	`............................................................SKTTRQASTGPSTLNNRSTVPTIKTISLYSLPLSFYFWQVFGLLLVGLLFLALSRSEQLDWLISNYWFDPVGQNF-NKWLDLLNHRLLKMALIATAIAALLWGIYRRNGRLVTTALLFGLGPLVIGILKATSAHS--GGHASSGFAVMALFFLFYPERPRLAMLC------WFAGIGLGMLMGF--GQIMRGAHLTHNLWAGWWVWLSQ.......`	253
12	-9.230	`[S] COG5395 Predicted membrane protein`	`ali follow..`	14	69	`.............................................................................................................................................VQVHLALTALAIGVVLMM--GTTLHKLLGW-----TWVLAMGSTAVSSLFIREINHGAFSF--IHLLSGWTIIGLKRGKVSAHRKAMTGMFVGGLLVAGVFTFLPGRL-----LWTVFLG...............`	186

FFAS is supported by the NIH grant R01-GM087218-01

jobs submitted since Jan 1, 2011

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