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Query: [C] COG1151 6Fe-6S prismane cluster-containing protein, from VFDB

Results of FFAS03 search in VFDB
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MSETISEKSEGRVSYHDSVEEMVKKIREDGMSNVFDRYALQEKIRCKFCLEGLSCQLCSNGPCRISEKTGQEKGVCGIGPDAMAMRNFLLKNIMGAGTYSHHAYEAYRTLKATAEGRTPFKITDENKLKWMCEKLGIDTAQSINDMAFELAVILEDQQRIGVEDQNVMVEAFAPKKRIEAWKKLGIYPAGTVHEEQNCVASCLTNVDGSHISLAMKALRLGIATIYNTQIGLEMVQDILFGTPTPHEVNMDLGIMDPEYVNIVFNGHQPWIGAATILKAKTPEIQDMAKQAGAKGLRVVGSIETGQELLQRFPVDEVFVGHMGNWLAIEPLLATGTVDIFAMEENCSPPAIDMYAEKYQVTLAAVSTIIDLPGVNYKFPYDPAQADETAQRLIELGIENFKKRKERQIKPHVPQKIQKAIAGFSTEAVLGALGNKLDPLVDVIAKGQIKGVVALANCSTLRNGPQDWVTINLTKELIKRDILVVSGGCGNHALEVAGLCTLDAANNIAGNGLKAVCNALKIPPVLSFGTCTDTGRISMLVTALAEHLNVDVPQLPIAVTAPEWMEQKATIDGIFALAYGAYTHLSPTPFMTGARQLVDLLTNKAEDVTGGKIALGDDPMKVANDIEDHIMRKRKELGLSLast
1 -169.000[C] COG1151 6Fe-6S prismane cluster-containing protein  ali  100  1MSETISEKSEGRVSYHDSVEEMVKKIREDGMSNVFDRYALQEKIRCKFCLEGLSCQLCSNGPCRISEKTGQEKGVCGIGPDAMAMRNFLLKNIMGAGTYSHHAYEAYRTLKATAEGRTPFKITDENKLKWMCEKLGIDTAQSINDMAFELAVILEDQQRIGVEDQNVMVEAFAPKKRIEAWKKLGIYPAGTVHEEQNCVASCLTNVDGSHISLAMKALRLGIATIYNTQIGLEMVQDILFGTPTPHEVNMDLGIMDPEYVNIVFNGHQPWIGAATILKAKTPEIQDMAKQAGAKGLRVVGSIETGQELLQRFPVDEVFVGHMGNWLAIEPLLATGTVDIFAMEENCSPPAIDMYAEKYQVTLAAVSTIIDLPGVNYKFPYDPAQADETAQRLIELGIENFKKRKERQIKPHVPQKIQKAIAGFSTEAVLGALGNKLDPLVDVIAKGQIKGVVALANCSTLRNGPQDWVTINLTKELIKRDILVVSGGCGNHALEVAGLCTLDAANNIAGNGLKAVCNALKIPPVLSFGTCTDTGRISMLVTALAEHLNVDVPQLPIAVTAPEWMEQKATIDGIFALAYGAYTHLSPTPFMTGARQLVDLLTNKAEDVTGGKIALGDDPMKVANDIEDHIMRKRKELGLS 639
2 -90.800[C] COG1152 CO dehydrogenase/acetyl-CoA synthase alpha subunit  ali follow..  14  21AKNIQISIGEIITEEKPPEEEVKGPKPRPHVTDLWDMKLLERY-EPFYAPFCDMCCLCTYGKCELLG----KKGACGIDAATQQARTVLLACLIGTAAHAGHARHLVDHLIERLGEDYKIDLGSNVDIE-------------------------------------APITRTVMGKRPATLGDLREVMDYAEEQMSHLLSACHTGQEGDSKDFESKAFHAGLMDDLTREVAQIVALDLPKGDEDAPLVELGFGTIDTEKPVVLCIGHNVLPGADIVDYLDENE--------MEDQVEVCGICCAAIDVT----RYNEAAKVVGPLSKQLRFIRSGVADVIVVDEQCVRTDVLEEALKNRSAVIATTDKMCLGLPDMTDEDPDKDPEKVGEVAVKTAMKLAPIRKSLKKLPDIDEIIELASECTDCGWCQRVCPNEIRRVGAPIVLGDIPGVVAFVGCSNYPEGGKDV--ALMAKEFLERNYIVVTTGCGAMSIGEYR-------DEDGQTLYEKYGGQFDAKGLVNMGSCVSNAHVSGAAIKIAEIADYILNRVGACGVAWGAYSQKAAAIATGVNRWGIPVVLGPHGSKYRRLFLGRADDEEKWKLKDLRTGEVIDGEPAPEHLLYAAENREEATVMI 703
3 -7.290[F] KOG1112 Ribonucleotide reductase, alpha subunit  ali follow..  9  14............................................................................GRKEHFDKITSRIQKLSYGLNMDFVDPVAVAIKVISGLYKGVT-----TVELDNLAAETAASMTTQHPEYALLAARIAVSNLHKKTNKVFSEVMKTLHEFHHPHTGKHAPMISDETWAIIELERSYLLKINKEIVELMRVSIGIHGDDITSAIETYNLMSERYMTHASPTLFNSGTCRPQMSSCFLLTMSED--SILGIYDTLK--QCALISKSAGGIGLNV------------------HKIRATGSVIAGTNGTSNGLIPMLRVYNNTARYVDQGGNKRPGAFAIYLEDIFEFVSLRKNTGPEEERARDLALWIPDLFMKRVEKDQEWSLMCPCECPGLDDCWGEEFEALYAKYEAE-GRVRKTVKARKLWEHIVSNQIETGLPYITYKDAANRKSNQQNLGTIKCSNLCTEIIEYSAP-----------DEIAVCNLASIALNRYVTPEKKFDFVKLAEVTKVITRNLNIDVNYYPVEEARNSNMRHRPIGLGV----QGLADCFMLMRYPFTSAEARDLNKRIFETIYYAALEASCELAE................... 554
4 -7.270[O] COG5207 Isopeptidase T  ali follow..  9  42......................................................CIYCFESPYNLALNASPKHSIC-LNCFQATCNRHVPLHIRVTEYACDTIHSNYLTIAKVE-KPKQENVEENNNNKKIKLQVIETSEDDTHNVLSKSTDSDISSTALEKIEKILKAKSQDFEDKKNSWVLEISTCPHTENSKPENTVNLNQCSSCDLTQNLWLCLHCGNIGCGREQIGIDGHSHALYRSNNNHPLAIKLGSLSSSTYDLYCYACD--------DETRFPDNVNLGSALQIYGINIQEKIADEKTLVQLQNWQFRMVDSSGKEFEKLSASKNYGCGLINLGNSCYLNSVIQSL--VNGGVPNWSLDFLGSKFPLDVVYPDNNLKCQWIKLLNAMKCEPELYPNGIKPTTFKKCIGQNHQEFSSNRQQDAME--LTFLLDLLDKKFFS-----------SSSSGIPNPNDLVRFMMEDRLQCNICGKVKYSYEPTEAIQIPLEENDEPQDMLERIKAYFEGQTIEF-KCANCKEKVTANKKPG------FKSLPQTLIL-NWIPVKT-------NELSLPGLIDRDDMLDVSSYLSQGFDPQTENLL-----PDEDENRSSFTPNQCSISQLIEMGFT 622
5 -6.630[F] COG0209 Ribonucleotide reductase, alpha subunit  ali follow..  10  37..............................................................................GLDYHALNAMLNLYDEDGKIQLDCDRQAARQYFLQHVNQNTVFFHNLREKLDYLVAEGYYEQTVLDQYSFNFVRDLFDEAYARKFRFPTFLGAFKYYTSYTLKTFDGKRYLERYEDRVCMVALTLARGDEQL-----------------ARDLVEEIISGRYQPATPTFLNAGKKQRGELVSCFLLRVED---MESIGRSIN--SALQLSKRGGGVALCLTNLREAGAPIKQIENQSSGIIPVMKLLEDSFSYANQL--GAGAVYLHAHHPDIMRFLDTKRENADEKIRIKTLSLGVVIPDITFELARNNEDMYLFSPYDVQRVYGVPLTEISVTEKYREMVNDAQIAKKKINAREFFQVLAEIQFESGYPYIMFEDTVNRANPIDGRITMSNLCSEIQVSEASLFHEDLSYEYLGKDISCNLGS---------------------LNIAAAMDAPDFGKTIETSIRALTAVSD--CVPSVARGNAESHAIGLGQ----MNLHGYLARERIFYGSEEGVDFTNIYFYTVAYHAVRASNRIAVETGKSFKGFEKSKYASG.. 555
6 -6.460[S] COG4855 Uncharacterized protein conserved in archaea  ali follow..  17  1..................................MERSCIASPTH-PFFGDCMKCYVCAE-----QGKDTDAVAIC---------------IVCGMGLCTEHAIREETEIWS............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 57
7 -5.660[P] COG0155 Sulfite reductase, beta subunit (hemoprotein)  ali follow..  8  83..............................................................................................................................RCRLPGGIITPQQWLGIDKFAADNTLYGSIRITNRQTFQFHGILKGNVKPAHQLLNELGLDALATANDVNRNVLCTSNPVESLHQEAYEWAKKISEHLLPRTRAYAEIWLDAEKVATTDEEPILGATYLPRK--KTTVVIPP---QNDVDLHANDLNFVAVADKGKLIGFNVLVGGGLSIA-----------HGDKNTYPRKASEFGYIPLKHTLAIAEAVVTTQRDWGNRTDRKNAKTKYTLERVGVETFKAEVEKRAGVSFSAIKPYQFIGRGDRIGWVKGVDKKWHLTLFVENGRLLDYPGRSLKTGVAEIAKIHQGDFR--LIVAGVPEKDKARIEALAREHLMDDNVTSQRENSMACVSFPTCPLAMAEAERFLPEFVTRVEGILQQHGLAD-LRVTGCPNGCG------------RALLAEVGLVGKAVGRYN---LHLGGNREGTRIPRMYRENITADEILLITDQLVGRWAKE--GDFVIRAGVIAPVIDSARDFYDVQEAM... 576
8 -5.640[S] COG4306 Uncharacterized protein conserved in bacteria  ali follow..  13  32...........................................SHSG-EATILQYPKCSAGVLGFGGDYEPPTNNCGSRPWAERKIAGTVELVEAGTDLTPDEVQQFRTDLTQLTKDSPKTQVTCLRFKKVMAKVRTSVASGVRDIVVDVLSEAAKKA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. 157
9 -5.580[M] COG2027 D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 4)  ali follow..  8  33...............................................................................................................................................................................................QYLPDGANLALMVQKIGASTPAIDYHAQQMALPASTQKVLTALAALLQLGPDFRFNTTLESHGTITDGVNLIARFGDPTLTR--------QQLRNMVATLRKAGVKIAGDVVIDTSVFASHDKAP------GWPWNDMTQCFSAPPAAAIVDRNCFSVSLYSAPNPGDTAFIRVASYYPVQMFSEVRTLAKGSPDAQYCELDVVPGELNRFTLTGCLTQRSEPLPLAFAVQNGASYAGAILKDELKKADIQI-DGNLRRQTIPSPAGNVLAQTQSAPLHDLLKIMLKKDTVFRTIGHQRFGVP----GTWRSGADAVRQILRQKAGVDLGNSIVVDGSGLSRHNLIS-PATMMQVLQYIISMLPLAGYVNGKVSAKTGALQ------GVYNLAGFITTASGQRMAFVQFLSGYAVPPEDQKNRRAPLVRFESRLYKDIYQNN...... 482
10 -5.570[U] COG3946 Type IV secretory pathway, VirJ component  ali follow..  8  1.................................................................................................................................................................................................................MKQFKIRSVLQSIALLVLAGTAAAEPKPEKITHGRFEQIPVLRPDGEPQRVVIWFSDAG------------VDQRTRQAEILRQDGAMVALV-NHCTFSVGDVENLSRYLQAYYRDKTYRLPLLVGLAGVVSDGLCPVVVPTQAVCGAGVASDQHLKPAPVAAPLLVMTVSSAHCPAQLTSGFVRKVALGREIRLAASADLLPRLRAALRVLGAQKGVSLPPPPADLDGLVPSKAQKKSDTFAIFVSGDGGWAEID----KKVAGHLADADIPVVGLDSLRYFWSE---RTPEGFAKDLDRIARFYAHHWKRNRLLLVGFSQGADVLPAAINKLSPNTRQIIRMTALLSLGKYAHYEPIAPDMVKLRSTRTVCIYGVDDQETLCPSLPQ--QNRRVALPGTH-HFNGDYETVAKTILAQMEAA....... 451
FFAS is supported by the NIH grant R01-GM087218-01
1 4 8 0 6 0   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Damiano JS, Stehlik C, Pio F, Godzik A., Reed JC. CLAN, a novel human CED-4-like gene. Genomics. 2001 Jul;75(1-3):77-83.