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Query: [C] COG1152 CO dehydrogenase/acetyl-CoA synthase alpha subunit, from VFDB

Results of FFAS03 search in VFDB
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MIDVAPESKKAKDLKGDFWDAKNIQISIGEIITEEKPPEEEVKGPKPRPHVTDLRSWDMKLLERYEPFYAPFCDMCCLCTYGKCELLGKKGACGIDAATQQARTVLLACLIGTAAHAGHARHLVDHLIERLGEDYKIDLGSNVDIEAPITRTVMGKRPATLGDLREVMDYAEEQMSHLLSACHTGQEGDSKDFESKAFHAGLMDDLTREVADLAQIVALDLPKGDEDAPLVELGFGTIDTEKPVVLCIGHNVLPGADIVDYLDENEMEDQVEVCGICCAAIDVTRYNEAAKVVGPLSKQLRFIRSGVADVIVVDEQCVRTDVLEEALKNRSAVIATTDKMCLGLPDMTDEDPDKIVNDLINGNIEGALILDPEKVGEVAVKTAMKLAPIRKSLKKLPDIDEIIELASECTDCGWCQRVCPNSLPVMDAVKKAADGDLSKLEEMAIEELCYTCGRCEQECERNIPIVSMVTKAGERRVKDEKYRIRAGRGPAQDVEIRRVGAPIVLGDIPGVVAFVGCSNYPEGGKDVALMAKEFLERNYIVVTTGCGAMSIGEYRDEDGQTLYEKYGGQFDAKGLVNMGSCVSNAHVSGAAIKIANIFAQKPLEGNFEEIADYILNRVGACGVAWGAYSQKAAAIATGVNRWGIPVVLGPHGSKYRRLFLGRADDEEKWKLKDLRTGEVIDGEPAPEHLLYAAENREEATVMIAKLCIRPTDTPKGRQMKLSNYIDLHRKYLGTIPDDIDRFIRTEKDIPIVYKRDVMKILEEKNWKPRELPKEPSLLERLast
1 -215.000[C] COG1152 CO dehydrogenase/acetyl-CoA synthase alpha subunit  ali  100  1MIDVAPESKKAKDLKGDFWDAKNIQISIGEIITEEKPPEEEVKGPKPRPHVTDLRSWDMKLLERYEPFYAPFCDMCCLCTYGKCELLGKKGACGIDAATQQARTVLLACLIGTAAHAGHARHLVDHLIERLGEDYKIDLGSNVDIEAPITRTVMGKRPATLGDLREVMDYAEEQMSHLLSACHTGQEGDSKDFESKAFHAGLMDDLTREVADLAQIVALDLPKGDEDAPLVELGFGTIDTEKPVVLCIGHNVLPGADIVDYLDENEMEDQVEVCGICCAAIDVTRYNEAAKVVGPLSKQLRFIRSGVADVIVVDEQCVRTDVLEEALKNRSAVIATTDKMCLGLPDMTDEDPDKIVNDLINGNIEGALILDPEKVGEVAVKTAMKLAPIRKSLKKLPDIDEIIELASECTDCGWCQRVCPNSLPVMDAVKKAADGDLSKLEEMAIEELCYTCGRCEQECERNIPIVSMVTKAGERRVKDEKYRIRAGRGPAQDVEIRRVGAPIVLGDIPGVVAFVGCSNYPEGGKDVALMAKEFLERNYIVVTTGCGAMSIGEYRDEDGQTLYEKYGGQFDAKGLVNMGSCVSNAHVSGAAIKIANIFAQKPLEGNFEEIADYILNRVGACGVAWGAYSQKAAAIATGVNRWGIPVVLGPHGSKYRRLFLGRADDEEKWKLKDLRTGEVIDGEPAPEHLLYAAENREEATVMIAKLCIRPTDTPKGRQMKLSNYIDLHRKYLGTIPDDIDRFIRTEKDIPIVYKRDVMKILEEKNWKPRELPKEPSLLER 780
2 -90.800[C] COG1151 6Fe-6S prismane cluster-containing protein  ali follow..  14  1....................MSETISEKSEGRVSYHDSVEEMVKKIREDGMSNV--FDRYALQEKRCKFCLEGLSCQLCSNGPCRISEEKGVCGIGPDAMAMRNFLLKNIMGAGTYSHHAYEAYRTLKATAEGRTPFKITDENKLKVMVEAFAPKKRIEAWKKLGIYPAGTVHEEQNCVASCLTNVDGSHISLAMKALRLGIATIYNTQI---GLEMVQDILFGTPTPHEVNMDLGIMDPEYVNIVFNGHQPWIGAATILKAKTPEGAKGLRVVGSIETGQELLVDEVFVGHMGNWLAIEPLLATGTVDIFAMEENCSPPAIDMYAEKYQVTLAAVSTIIDLPGVNYKFPYDPA----------------QADETAQRLIELGIENFKKRKERQIKPHVPQKIQKAIAGFSTEAVLGALGN-------------------------------------------------------------------------KLDPLVDVIAKGQIKGVVALANCSTLRNGPQDWINLTKELIKRDILVVSGGCGNHALEVAGNNIAGNGLKAVCNALKIPPVLSFGTCTDTGRISMLVTALA-------------EHLNVDVPQLPIAVTAPEWMEQKATIDGIFALAYGAYTHLSPTPFMTGARQLVDLLTNKAEDVTGGKIALGDDPMKVANDIEDHIMRKRKELGLS............................................................................. 639
3 -26.600[C] COG4656 Predicted NADH:ubiquinone oxidoreductase, subunit RnfC  ali follow..  10  133............................................................................................................................................................................MALLDRIHQAGIGGAGFPTASKLQGIITLIINAAECEPYITADDRLM-QEHADEVITGIHILRHLLQPQQVLIGIEDNKPEAIAALQRALRG---QDDIHLRVV-----PTKYPSGGAKQLTKILTGKEVPFGKHSSIGVLMQNVGTVVAIKRAVIDDEPLTGDALSSPGNFWARIGTPVLYLLKLAGFPQNPPMVIMGGPLMGFTLPSLDVPIVKISNCILAPAETEGLSEPEQSCIRCGLCVDACPAGLLPQQLYWFSRGEEHEKARNHNLFD-CIECGACAYVCPSNIPLVQYYRQEKAEIRALDQESARAAEAK------------------------------ARFEAKQARLAREKLARE----------LRHKQAAVKLTDADQQTVDAAVSRLTRQSDGSESVINIPAGQMPDNSAVIAAREARKAQARARQAEKQQARSTEETTDVVDPRQAAVAAAIARVK------------AKKAVQAQHVTTDVAEAGSEAMAEDPRKAAVAAAIARVKAKKAA................................................................................. 614
4 -23.500[C] COG1150 Heterodisulfide reductase, subunit C  ali follow..  19  1................................................................................................................................................................................................................................................................................................................................................................................MVEPRDTVIREEDLNPDFLEELSELVEPVFEEEEVLSVQACYQCGTCTGSCPSGYRTRLIMRKLQLGLVDEVIKSDELWMCTTCYTCYERCPRGVKIVDAVKAARNLAAKK............................................................................................................................................................................................................................................................................................................. 115
5 -19.100[C] COG1139 Uncharacterized conserved protein containing a ferredoxin-like domain  ali follow..  10  16................................................................................................................EEIQNDIMRKAVVMAQERIGANRQKMVEELGHWEE-WREHAKEIRNHVIENLDAYLYQLSEKVIQNGGHVYFAATADATNYIKNVAKQKNAKKIVKSKSMVTEEIGMNHVLEAEGIKVVETDLGRHQIRKVLAEKLGYTGSDTPEEMTLFIRETIRNDFLEADIGVSGCNFAVAETGSVCLVT--------NEGNLRLATSLPK------THIAVMGMERLAPTFKEVDVLITLLARSAVGARLTGYNT------WLTGPRLAGETDGPEEFHLVIVDNGRSKM--LGSEFREVLRCIRCGACLNTCPAYRQIGGIGSVISPILGGYEEFKDLPSACSLCTACNQVCPVKIPLANLLLKHRRHIAESG............................................................................................................................................................................................................................................................................................................ 393
6 -18.900[C] COG1146 Ferredoxin  ali follow..  19  42....................................................................................................................................................................................................................................................................................................................................................................................................................DYDKCVTCGICFVTCGRRV-------FDFDKKEGKVIVARPYNCMVACQTCMNLCPTGA............................................................................................................................................................................................................................................................................................................................. 93
7 -18.600[C] COG1726 Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrA  ali follow..  10  38.............................................................................................GMRPSMKVREG---VVKKGQVLFEDKKNPGVVFTAPASGTVTAIHRGAKRVLQSVVIKIEGNEQITFEKYTTEQLNQLTSEVRQNLQASGL----SKVPAVDATPVSIFVNAMDTNPLCADPQVIVQ-QSAQAFEAGLTVLSRLHEGKVYLCKAANASIP--------SPSIANLDVKEFAGPHPAGLSGTH----IHFIDPVSATKFVWYINYQDVIAVGKLFTTGELDVSRV---VSLAGPQVKNPRLVRTVLGANLSQLTANEVKDG-ENRVISGSVLSGAKAAGPVDYLGRYALQVSVLEEGRALNGGERAMVPIGAYERVMPLDIIPTLLLRDLAAGDTDSAQALGCLE-LDELALCTFVCPGKNEYGPLLRQALDKIEKE............................................................................................................................................................................................................................................................................................................. 445
8 -17.800[C] COG1144 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, delta subunit  ali follow..  17  25............................................................................................................................................................................................................................................................................................................................................................................................EAPITLGTTLVNFTGDWRTFMPVIDESKCVKCYICWKFCPEPAIYIK----------EDGFVAIDYDYCKGCGICANECPTKA............................................................................................................................................................................................................................................................................................................................. 97
9 -17.500[C] COG0479 Succinate dehydrogenase/fumarate reductase, Fe-S protein subunit  ali follow..  16  134....................................................................................................................................................................................................................................................................................................................................................................................AQHRSIEPWLKTVSPTPAKEWKQSHEDRLKLDGLYECILCACCSTSCPSYLGPAVLLQAYRGERLDNLEDPFRLYRCHTIMNCAQACPKGLNPAKAIAEIKKMMVERR............................................................................................................................................................................................................................................................................................................ 258
10 -17.500[C] KOG3049 Succinate dehydrogenase, Fe-S protein subunit  ali follow..  14  157...........................................................................................................................................................................................................................................................................................................................................................................................LKKKDESQEGKQQYLQSIEEREKLDGLYECILCACCSTSCPSYLGPAVLMQAYREERLAKLQDPFSLYRCHTIMNCTRTCPKGLNPGKAIAEIKKMMATYKEKKASV...................................................................................................................................................................................................................................................................................................... 280
11 -17.300[C] COG1143 Formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit (chain I)  ali follow..  11  5...............................................................................................................................................................................................................................................................................................................................................................IINVVHGTFTQLRSLVMIFGHAFRKRDTLQYPEEPVYLPPRYRGRIVLTRDPDGEERCVACNLCAVACPVGCISLQKAETEDGRWYPEFFRIN-FSRCIFCGLCEEACPTTIQLTPDFEMGEFKRQD.............................................................................................................................................................................................................................................................................................................. 131
12 -16.800[C] COG2878 Predicted NADH:ubiquinone oxidoreductase, subunit RnfB  ali follow..  23  115......................................................................................................................................................................................................................................................................................................................................................................................................................NNCIGCTKCIQACPVDAIVGA----------TRAMHTVMSDLCTGCNLCVDPCPTHC............................................................................................................................................................................................................................................................................................................................. 161
13 -16.700[C] COG0247 Fe-S oxidoreductase  ali follow..  12  273....................................................................................................................................................................................................................................................................................................................................................................................................................DLYACVECGRCTNMCPATLSPMDLILRLRDHLTEKGAAVEEIWACTTCRNCEDQCPVMNEHVDKIIDLRRYLVLTEGKMDSDAQRAMTSIERQGNPWGLNRKERENWRDEAPDAEIPTVKEMKKE-----GKEFEYLFWVGSMGSNRSQKIAISFAKLLNHAGVSFAI--LGNKEKNSGDTPRRLGNEFLFQELAEKNISEFEKNDVKKIVTIDPHAYNLFKEYPDFGFEGEVYHHTEVLAELVKNGKLRPQHPLHETITFHDSCYLGRYNEVYDPPREILKAILVEMERSRETGMCCGAGGGLMWMEEETGNRINVARTEQALAVNPSVISGDGTKAKEAEDQVKTYDVVELLQSVLGADLKMGE.......... 703
14 -16.500[C] KOG3256 NADH:ubiquinone oxidoreductase, NDUFS8/23 kDa subunit  ali follow..  14  84......................................................................................................................................................................................................................................................................................................................................................................................KEPATINYPFEKGPLSPRFRGEHALRRYPSGEERCIACKLCEAICPAQAI---TIEAEERADGSRRTTRYDIDKCIYCGFCQEACPVD.............................................................................................................................................................................................................................................................................................................................. 170
15 -16.300[R] COG1453 Predicted oxidoreductases of the aldo/keto reductase family  ali follow..  9  6....................................................................MPKNGDELSILGFGCMRLPVKED----SVDEERATRQVRYAIDQGVNYVDTAWPYHMGESEPF--------------------------------LGRALADGYREKVKLATKLPSWMVKSREDMD----------------------------------KFLNAQLEKLKTDHIDYYLETWDRIEALNVIDFFEKAKSDGRIVNAGFSFHGLANDF--------------KRIVDAYPWTFCQIQYNFMGTEGLKYAASKGLGVMIMEPLRGGNLARTVPTPVEWALRWVWNHPEVTVVLSGMNEEVHIKENLKISLTEAELQLVSKVEQKYRQIMKVGCTGCQYCMP-CPSGVNIPECFSIYNHSGAVSGGKPGMASQCVQCGQCLEKCPQHIDIPTILESVAEELEGSDLEERIAIVKQEMHKQI............................................................................................................................................................................................................................................................................................ 400
16 -14.500[C] COG0348 Polyferredoxin  ali follow..  18  210........................................................................................................................................................................................................................................................................................................................................................................................................IGAKGLFRIKVEHRQQCDNCMDCYNVCPEPQVLRDPLHAKKSE-----SPLVLSKDCISCGRCIDVCPEKVFIFTTRFNHSVNHSGE............................................................................................................................................................................................................................................................................................................. 291
17 -14.000[C] COG1145 Ferredoxin  ali follow..  10  3....................................................................................................................................................................HSHHLEIYEKLREKLNKAPIGLPKTVSGVEKELLSV------------------------------------LFDEEEAKIAVHPFIRFTAEQLAERTGKSLEYVEKILNEMAKKGTVWKGEKDGQETPFWPGPGKDPRQEKLARLWSQYRKEGFLDEIGDREHPIMRALPERDTISEKSEILPYEDAVKLVKERISADEAIEILRQSNREGLVHLTFFKAVHEAKHPNTIAHSSYLATVDTSRCIACGICMLRCPMK-----AIKAKINREPASVDA----EKCLGCGVCVPTCPMEIELVERDELLELPDGMTYVQELLADKGRDPSGLF............................................................................................................................................................................................................................................................................................ 368
18 -13.300[C] COG1035 Coenzyme F420-reducing hydrogenase, beta subunit  ali follow..  17  1...........................................................................................................................................................................................................................................................................................................................................................................................................MPPKIAEVIDYDVCAACGACEAVCPIGVTVKKAAGIRDPNDLSLYEKGGGYQVCEGCLTCSRVCPVDGFIQDELTNVRKFFGARSKDNVGSQDGGVASGILKSL---FKQGKIDCAVGVERTRGTKYTSDPVLAALREAFEKYDRIAVIGCQAHAAHLIRENVNEKIVLIIG-------------CMESFHHDVMLEKIIPEILKVKLEDPIKDVAKFARNPCHHCCDYTSVFADISVGSVGAPDGWNSVFIRTEIGEKYFDMVREDIMEDPKPGLELVEKLIGMKRKGNAEHFLEVCEKF.................................................................................... 335
19 -13.200[C] COG2440 Ferredoxin-like protein  ali follow..  16  1......................................................................................................................................................................................................................................................................................................................................................................................MTMAVTKLRVEEKLYQNRYLVDPGRPHIKVRPHERPSANLLTHICPAKCYELN----------DKGQVETTSDGCMECGTCRVLCEASGEI........................................................................................................................................................................................................................................................................................................................... 83
20 -12.500[C] COG1014 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, gamma subunit  ali follow..  11  10.......................................................................................GSDGT--VGANKAAIKIIGDNTDLYAQGYFSYDSKKSGGLTVSHLRFGENRIRSAYLIQQA--DFVSCSTSAYLRSYDLL-KGLKPGGTFLLNTIWEGEQLE-EYIAKNNIQFYTLNA-------------------------MRIAGEAGLGRRINTVMQT----AFFRVTDILPFEKALADLK---------ASAIATYGKKDMAVAEKNILAMDQTVANL----------HKVEVPESWANPVLTAEASTATEKPAYVKNILEPVNRLEGDNLTVGDLISNGMVSGAYPPGTAAYEKRGIALEVPEWISE-------NCTMCNECAFVCPHAAIRPILTNEMRGKDGLRYRIQVSPMDCTGCNLCAETCPAKDKALVMKPFEEVAAKENPN........................................................................................................................................................................................................................................................................................................... 364
21 -12.000[C] COG1142 Fe-S-cluster-containing hydrogenase components 2  ali follow..  14  19........................................................................................................................................................................................................................................................................................................................................................................................EAACSETHRQHGLQSMPRLRVMLNEKESAPQLCHHCEDCAVVCPVNAITR-----------VDGAVQLNESLCVSCKLCGIACPFGAIEFSGSRPLDIPANANTPKAPPAPPAPARISTLLDWVPGLCSFDEQGPACVRMCPTKALHLVDNTDIARVSKRKRELTFNT............................................................................................................................................................................................................................................ 186
22 -11.900[R] COG3383 Uncharacterized anaerobic dehydrogenase  ali follow..  11  2...............................................................................................................................................................................................................................................GAKVSVRINGEARDVGTRILDYLNAE----GIQHPHIC--------------------YSEQIGPIQSCDTCMCEVDGELMRACSTNLTDGMEIKTNSEL--------AKDAQLEAMDRILENHLLYCTVCDNNNGNCKVHNTTELLGVEKQDRPYREKGYLNDFDPDQCILCGRCVEAC-QQVQVNETLSIDWERSQPRVIWDDNLSSCVSCGLCATVCPCNALMEKSMLGQAGFMTGLDEDMLEPMIDMVKKVEPNYQTVFAV----------------SEMEAAMRETRTKKTKTVCTFCGVGCTFEVWTKDRKILKVEPTGEGP--------VNKFATCVKGKFGWDFVNSEKRITTPLIRASWEDAIHLVATKLREIQAKYGNSSSKTTNEENYLMQKLARQVFETNNIDNCSRYCQAPASDGLTRTVGIG---------ADSGTVEDIESAGLVIIVGASPASRIKRAQKTRGQKL--VSDLRKHEMAERS-DLFIHPKQGTDFVWL--TAVAKYIIDQNWHDQVFMENRI.... 501
23 -11.000[Y] KOG2439 Nuclear architecture related protein  ali follow..  10  1........................................................................................................................................................................................................................................................................................................................................................................................................MSALLSESDLNDFISPALACVKPTQVSGGKDNVNMNGEYEVSTEPDQLEKVSILSDCLACSGCITSSESHSVFLKNWGKLSQQQDKFLVVSVSPQCRLSLAQYYGLTLEAADLCLMNFFQKHFQCKYMVGTE-SISKTVEKIIAHRKPLLSAVCPGLLNVKSPQQITGSLIRATFESLAIARHLSLMPCFD-----------------KKLEASRPESLDDGIDCVITPREIVTMLQELNLDFKS............................................................................................................................................... 270
24 -10.900[C] COG1140 Nitrate reductase beta subunit  ali follow..  12  182......................................................................................................................................................................................................................................................................................................................................................................................................................RLCEHC-ACVATCPSG---------AIYKREEDGIVLIDQDKCRGWRMCITGCPYKKIYFNWKSGKSEK-----------------------------------------CI-----------CYPRIEAGQPTVCSETCVGRIRYLGVLLYDADAIERAASTENEKDLYQRQLEVFLDPNDPKVIEQAIKDGIPLSVIEAAQQS--VYKMAMEWKLALPLHPEYRTLPMVWYVPPLSPIQSAADAGELGSNGILPDVESLRIPVQYLANLLTAGDTKPVLRALKRMLAMRHYK--RAETVDGKVDTRALEEVGLTQAQEMYRYL--AIANYEDRFV-----VPSSHRELAREAFPEKN............... 474
25 -10.800[R] COG2768 Uncharacterized Fe-S center protein  ali follow..  11  1..................................................................................................................................................................................MKDVFYTSTRAEVTDPAKWYQPD--LSAVRKLEKLIDESGVLDVVSKGDVVAVKTHFGDRGTTRTL------RSVFIRTVVEKVIEAGGRPFVTETTGLGMLRPRCTAVGRINIAEENGYTHQTLKAPIIIADGLLGFDYVEVPVEGKHLNSVKVAKAI------------AECDAVICCTHFKLHMQAGVGG-------SIKNVGVGCVAKPSKFDIHMSDYPQIDEEKCTKCDECVKICPSNAIEDYQINR---------------EKCVKCLGCSEACDYG----------AVKTFWVFGRDVSERIVECTKGVFKVQKNFAYLNFLMDIT--PHCDCHPYSDLPVVPDLGIMASKDILAIDRASVDLYRQAENLSGALLKDKKFWDWTDVEGMLNYAEKLELGTQNYRLIEIS......................................................................................................................................................................................... 363
26 -10.600[C] COG0437 Fe-S-cluster-containing hydrogenase components 1  ali follow..  20  66.......................................................................................................................................................................................................................................................................................................................................................................................................................SCNHCDDCTKVCPSGAMHKR----------EDGFVVVDEDVCIGCRYCHMACPYGAPQYNAEKGHMTK................................................................................................................................................................................................................................................................................................................. 125
27 -10.100[C] COG2048 Heterodisulfide reductase, subunit B  ali follow..  10  19...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................VAYYPGCSLEGAARAYDVSTRIVAKELGLELD---YLEDYNCCGAMETKNVSFWGTMLLNARNMSLARRQGHNVIVAPCNGCSFSLQRVEYFLETDKNTLDRIN--AGPEKVKEKTKKPLRGKVASYYGCLYTRPHFYARTYSHLAPED-ATSVEIEPMHTQCCGGP-HSLSDEEVSEKFVMMILQTAKRNGADIIAHRLMLKGVPDVDVPAAYFTQLLGLANDVKLKDNLSDPIP-VLKR 327
28 -9.890[R] KOG4399 C2HC-type Zn-finger protein  ali follow..  9  1MV---SDEYKAKRLERKKRFMQQAKKNNVFKARRRNNFSKRPNFHNHQQENQQEQQFQKQDSTALRQRGFFQVLPTDQCSHGPCLLFEKKNACAIYRNQAEFCDF--KLTFNKETGEIEVKEAVEGEEDAEKKKKKKKIFGYNRIPKALTEMSPTDTVLYCKTCINVFPNKHECVCEPVEREALERPTHLLPPVNEQHGES----FSTETLDVITKAVEKSKVDG---------ILCIGAPRIFENIRALHPEKNVFLLDYDKRFAKFFPSKQYAQYSMLVDHFFDKIAEPKLMEFFDKSKSILMITDPPFGVFMEPLLKSIEKMKKRFVS---TGKEETLFYSMIVLPIYIRKYVLHGNFWMSDYRVTYEGHKLYQHSEKTIVRLFTDLPVECIDLKNVAGYKFCEVC-HCDRC-QACTS-------------------VEQGKWNHCEKCDKCVK-CAQ............................................................................................................................................................................................................................................................................................................................... 451
29 -9.710[C] COG4231 Indolepyruvate ferredoxin oxidoreductase, alpha and beta subunits  ali follow..  11  250...............................................................................................................GIIACGLSYAYTKEALENLNLNLPVLKLSSMHPLPERLIENFVSQMKKVI--VEEVDPFVELHVRAMGLAEVYGKMNGYMEYNVGRVETGIAKALGIKPSRDYEGIVAESQKGCPHSASFYAIRRVVDELGDAALPSD----ASVGVSNGLAHVLNNKIIATIG------DSTFIHAGIPPLINAVYNHADFVLVILD----STTGMTGHQPHPGTGFRGCGEAGKAVRIEDIVRGCGVEFVEVVNPYNVRKMVDVLRRALNHDGVAVVIARQPCAILWSRARRREGKIVTYKVTEDCTLCMECVNACPA---------LIFDGEKVSIDQ----SLCVGCAVCAKICPNRA............................................................................................................................................................................................................................................................................................................................. 616
30 -9.430[C] COG1141 Ferredoxin  ali follow..  10  43.............................................................................................................................................................................................................................................................................................................................................................................................................RQKGVYVDEITCIGCKHCAHVARNTFYIEPDYGRSRVIR-------QDGDAEEVIQEAIDTCPVD.............................................................................................................................................................................................................................................................................................................................. 100
31 -9.380[R] COG4624 Iron only hydrogenase large subunit, C-terminal domain  ali follow..  8  14......................................................................................................................................................................................................................................................................................................................................................................................................................DLPKDNKKCIKIGSP--------------------LALSLSDCLACSGCVSADEAGLSEDLSFVLDLSPQTSFVLSPQSKINIFNLYREDGMEYREFEAVLSSFLRSKFNIHDTSYLRSKIYEETYREYMATNHLIVSACPGVVTYIERTSRVKSPQQMAFSLVKGSRTVSVMPCQDKLENGRDGVKFDFILTTRGFCKALDS-LGFRRPARASGKSLCSMEEAETTQWNIGTSSGGYAEFILGKHCVVETREIRNGIKEHL--LDDGRTISQITGLENSINYFKSSKTKGPR-CIGGPGQERVNDVEMDIREYDRNGREQPRIFYSSPGLEEKRVFREVKAKRVDLRVD---------W.............. 365
32 -9.180[C] COG1036 Archaeal flavoproteins  ali follow..  15  1.............................................................................................................................................................................................................................................MSFKSIAWGITGAGHFLDRSVFKELKQRDPELSVNTY-ISRAAEEVLRMYGLEQKLVKISGGDY-----LEEIFRESEQGSSSPKVGRFLLDRYDALFVTPATSNTVSKIAYGIADSLVTNAVAQAVKG------------KVPVYVVPVDIEGSIISEMPYNIDRKQCRHCETCP-PRENCPHGAITEK----------NGVTDQIELLKCKGCGICKELCPYNAIKGGPVEVLVRD................................................................................................................................................................................................................................................................................................................. 211
FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Igarashi Y, Eroshkin A, Gramatikova S, Gramatikoff K, Zhang Y, Smith JW,Osterman AL, Godzik A. CutDB: a proteolytic event database. Nucleic Acids Res. 2007 Jan;35(Database issue):D546-9. Epub 2006 Nov 16.