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Query: [I] COG1607 Acyl-CoA hydrolase, from VFDB

Results of FFAS03 search in VFDB
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
    .   10    .   20    .   30    .   40    .   50    .   60    .   70    .   80    .   90    .  100    .  110    .  120    .  130    .
# Score Template Links and tools%idFirst MSYIDDIASISAARHCRRETVTASMDSVDFLKPIGQKDSVCLESYVTWVGTSSMEVFVKVIKEHLMTGERELAATSFLTFVALDSNGKPVPVPRVVPETEEEIMLHNTAVQRANERKNRKRHSQALANALGTDKPWLast
1 -83.600[I] COG1607 Acyl-CoA hydrolase  ali  100  1MSYIDDIASISAARHCRRETVTASMDSVDFLKPIGQKDSVCLESYVTWVGTSSMEVFVKVIKEHLMTGERELAATSFLTFVALDSNGKPVPVPRVVPETEEEIMLHNTAVQRANERKNRKRHSQALANALGTDKPW 136
2 -47.700[I] KOG2763 Acyl-CoA thioesterase  ali follow..  15  293IRKAIEISYMTASLYSNQRCMIRFIADVTFAHSIPVHSYIKLKAYVVFTHENYIQLLTVVNAIDGNSFTELKCNVLHLTYSCSKA------VPEILPRSYHEALWYLTGRRYFNRFRESVSHDMDNGSAVETN... 419
3 -15.800[R] COG0824 Predicted thioesterase  ali follow..  15  35.ASLRTSGISLKEFFTNPSMAFPIVHSVDFLRPLFCGAQVIISLVPQKIGAEKFEINYEIYLAD------VLVAKAVTRHVCIDANTSKQELSMEIIQWLDGYRKDTEEVERRKAR.................... 145
4 -13.800[R] COG5496 Predicted thioesterase  ali follow..  10  46VGIIEWACMELLRPHLDDGEISLGTHNFSHAAPTVPGSTVTIDVEVTEINRRAVTFNITAADEF------ATISTGTHQRGVVNREKFVSRLPEAPKEN..................................... 139
5 -12.600[S] KOG4781 Uncharacterized conserved protein  ali follow..  14  161...MDELAICSFLSLPNKIAVTANLK-LSNPTKAYTNHFYILRSHLEWTKGRKAQTHGTAYLDNEDPSKSTCVAIADGLFGMLS.................................................... 242
6 -12.500[R] KOG3328 HGG motif-containing thioesterase  ali follow..  12  64STLIDIFTTGALLLTKPARPGVSVDLHVTYLTAAKIGETLVLDSTVIKQGKTLAFTKAELYRKN........................................................................ 127
7 -11.000[I] COG2030 Acyl dehydratase  ali follow..  10  88...LSAAAGLFVDAGVGPVIANYGLESLRFIEPVKPGDTIQVRLTCKRKSAEEKPTGVVEWAVEVFNQHQTPVALYSILTLVARQHGDFVD............................................. 181
8 -10.500[I] COG0764 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases  ali follow..  15  68LEALAQAMGILAFK-GGELFYFAGIDEARFKRPVLPGDQMELNVQVIKKRRGITAFTGVATVNG------EIACEAKLMCA....................................................... 146
9 -9.670[R] KOG4366 Predicted thioesterase  ali follow..  3  82VDFYERTNLYRTITGMGGSVFQGAA-TIRYRRFIRPFHRFNIISRIIYWDEQSLFMEHRFVRPS--DKFVHCIAICRQRVIDVSMEAVMSELLPRTSSNGFRATVLTSLAAPSPAAGGISNPAMDTSLAENGH... 211
10 -9.570[Q] COG2050 Uncharacterized protein, possibly involved in aromatic compounds catabolism  ali follow..  14  67.AVLDVAAGLVCVGNSLAKMGTIDL-RVDYLRPGR-GEHFIARSSILRSGNKVAVARVELH-----NEKQIHIASATATYLV...................................................... 155
FFAS is supported by the NIH grant R01-GM087218-01
1 4 7 9 4 0   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Li W, Jaroszewski L, Godzik A. Tolerating some redundancy significantly speeds up clustering of large protein databases. Bioinformatics. 2002 Jan;18(1):77-82.