FFAS03 results for COG2410

Query: [S] COG2410 Uncharacterized conserved protein, from VFDB

Results of FFAS03 search in VFDB
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.

						`. 10 . 20 . 30 . 40 . 50 . 60 . 70 . 80 . 90 . 100 . 110 . 120 . 130 . 140 . 150 . 160 . 170 . 180`
#	Score	Template	Links and tools	%id	First	`MYCGIDVGLKKCHAALISDRLEFVGDYTELDLDNVRVTGIDAPLSFPAKGSLRECERLLLKMGIRLFPSGAPFFRGIALRGMEIAEELRSKGVEVYEVYPYATRVILNIAPKAKKHTKSGLEEIRAELSRWVEIPELSHDEVDAVIAALTVKLFSEGMGVKLEGIDGSIVVPKGRVQLSLNP`	Last
1	-93.500	`[S] COG2410 Uncharacterized conserved protein`	`ali`	100	1	`MYCGIDVGLKKCHAALISDRLEFVGDYTELDLDNVRVTGIDAPLSFPAKGSLRECERLLLKMGIRLFPSGAPFFRGIALRGMEIAEELRSKGVEVYEVYPYATRVILNIAPKAKKHTKSGLEEIRAELSRWVEIPELSHDEVDAVIAALTVKLFSEGMGVKLEGIDGSIVVPKGRVQLSLNP`	182
2	-52.800	`[S] COG4328 Uncharacterized protein conserved in bacteria`	`ali follow..`	15	9	`SIVGFDSAWAPGAICVIRLDGDGAHLYRERKEAQKCLVALDQPTIVPNLTGSRPVDRVAGSLGVQPASRSKKGMFDDGAPIWRFKQTLASSGLFLIEVFPALALAAIEGTFCSRLAAPKYKISDWQAVAEAVRPRKADQDKVDALICGLIGLHWLAAQSVMIGDESGYMIAPATRGVHE...`	260
3	-45.100	`[S] COG4923 Uncharacterized conserved protein`	`ali follow..`	17	5	`VFVGVDGCRAGWFVVFFGGGNCLVDFLKNNYEQVDPLILIDIPIGLKGGSGERLSDLGARSRKSSIFPVPCREAKRISKQAWNIVPKIRDVDGKVREVGPEICFQAFGFPMKYPKKKDEGFLERKEVLDNVRRKDLSKDDILDALAAALTAQMGGICGFTYVPDSKGLMVYCECEKVRS...`	255
4	-13.600	`[L] COG0817 Holliday junction resolvasome, endonuclease subunit`	`ali follow..`	14	3	`IILGIDPGSRVTGYGVIRQAGRHLEYLGS------VIRTSVTDLPTRLKRIYMGVNEIILQYQPDMFAIEEVFLAKNANSALKLGQAAVNHDLPVFEYAARLVKQTVVGIGSADKIQVQDMVTRILTLSE-----KPQADAADALAIAIT................................`	149
5	-9.090	`[S] COG5323 Uncharacterized conserved protein`	`ali follow..`	12	265	`IVVAVDPPASSGKVAGIDAEGVGHRAIALYHTHEADAIVAEV------NQGGEMVAAVLAAEDPSVPVLKRRASRGKWLRAEPVAALYEQGRVRHAGRFPALEDEMCDFAPEGLSSGR-------------------SPDRLDALVWALGELMLGADHKPRIRR--G...............`	430
6	-9.070	`[R] COG5362 Phage-related terminase`	`ali follow..`	12	13	`SAQSWDMAFKDT-------KKSDFVAGHVWNRKKADFFFIDR---IHDRMGLPETLNAVRRLTIK-HPLAIAKYIEEKANGPAVMQTLKGEITGMIGVEPETPLFESGNVYFPHPLYAPWISDVIEEMLAFPNG--EHDDDVDAMTQALV................................`	159
7	-8.870	`[R] COG4373 Mu-like prophage FluMu protein gp28`	`ali follow..`	12	348	`FSFGEDFARTGDLSCFVLAQQEQVMMYILTRVPALVGAAFDA-----TGNGGYLAEAALLAFGPDIIDCVMLSPKWYGEWMPKLKAEFEDQNILV----ARHQTTLDDLRHVKVVNGIPQIDKGRTKDQNATAVNARRHG--DFAVALCMANRASYMEGFILDESA................`	524
8	-7.960	`[L] COG0816 Predicted endonuclease involved in recombination (possible Holliday junction resolvase in Mycoplasmas and B. subtilis)`	`ali follow..`	11	5	`.LLAFDFGTKSIGVAVGQRITGTARPLPAIKAQQPDEIIVGLPLNMDGTEQPL------------------------TARARKFANRIHGRFGVEVKLHDE----------------RLSTVEARSGLFEQGGYRALNKGKIDSASAVIILESYFEQG........................`	137
9	-7.470	`[R] COG5565 Bacteriophage terminase large (ATPase) subunit and inactivated derivatives`	`ali follow..`	15	303	`QIGGLDFGWDHPFAAVWDRDADVFHVTKIYREREATPWAWPHDGLQHDKGSGEQLAAQYRAQGLALLPERATFDDGTNGVEAGLSDMLQRMQSGRWKVFSTC---------------TEWFEEFRLYHRKDGRIVKERDDLISASRYALMMKRHARAN........................`	463
10	-6.950	`[L] COG1039 Ribonuclease HIII`	`ali follow..`	8	78	`.LIGTDEVGNGSYFGGLMVTASFVS---EENLNFLKEIGVADSKKLTDEKICQIAPKLIDRIPHVALVVEPAKYNEVIASGYNAVSIKVALHNQAIYLLEKQL-ENIVIDAFTTEANYKKYVNKEQNHPLTKVTLLTKAEDQFLAVAVIISRYLFLENLKKLSKESGF..............`	246

FFAS is supported by the NIH grant R01-GM087218-01

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