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Query: [P] COG2895 GTPases - Sulfate adenylate transferase subunit 1, from VFDB

Results of FFAS03 search in VFDB
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MNTALAQQIANEGGVEAWMIAQQHKSLLRFLTCGSVDDGKSTLIGRLLHDTRQIYEDQLSSLHNDSKRHGTQGEKLDLALLVDGLQAEREQGITIDVAYRYFSTEKRKFIIADTPGHEQYTRNMATGASTCELAILLIDARKGVLDQTRRHSFISTLLGIKHLVVAINKMDLVDYSEETFTRIREDYLTFAGQLPGNLDIRFVPLSALEGDNVASQSESMPWYSGPTLLEVLETVEIQRVVDAQPMRFPVQYVNRPNLDFRGYAGTLASGRVEVGQRVKVLPSGVESNVARIVTFDGDREEAFAGEAITLVLTDEIDISRGDLLLAADEALPAVQSASVDVVWMAEQPLSPGQSYDIKIAGKKTRARVDGIRYQVDINNLTQREVENLPLNGIGLVDLTFDEPLVLDRYQQNPVTGGLIFIDRLSNVTVGAGMVHEPVSQATAAPSEFSAFELELNALVRRHFPHWGARDLLGDKLast
1 -128.000[P] COG2895 GTPases - Sulfate adenylate transferase subunit 1  ali  100  1MNTALAQQIANEGGVEAWMIAQQHKSLLRFLTCGSVDDGKSTLIGRLLHDTRQIYEDQLSSLHNDSKRHGTQGEKLDLALLVDGLQAEREQGITIDVAYRYFSTEKRKFIIADTPGHEQYTRNMATGASTCELAILLIDARKGVLDQTRRHSFISTLLGIKHLVVAINKMDLVDYSEETFTRIREDYLTFAGQLPGNLDIRFVPLSALEGDNVASQSESMPWYSGPTLLEVLETVEIQRVVDAQPMRFPVQYVNRPNLDFRGYAGTLASGRVEVGQRVKVLPSGVESNVARIVTFDGDREEAFAGEAITLVLTDEIDISRGDLLLAADEALPAVQSASVDVVWMAEQPLSPGQSYDIKIAGKKTRARVDGIRYQVDINNLTQREVENLPLNGIGLVDLTFDEPLVLDRYQQNPVTGGLIFIDRLSNVTVGAGMVHEPVSQATAAPSEFSAFELELNALVRRHFPHWGARDLLGDK 475
2 -105.000[J] KOG0052 Translation elongation factor EF-1 alpha/Tu  ali follow..  26  2.....................GKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGS--FKYAWVLDKLKAERERGITIDIALWKFETAKYYITIIDAPGHRDFIKNMITGTSQADCAVLVVACGTGEFEQTREHALLAQTLGVKQLIVACNKMDSTEFSEARFTEITNEVSGFIKKIGYNKAVPFVPISGFNGDNMLEVSSNMPWASGKTLLEALDSIIPPQRPTDRPLRLPLQDVYKIGGIGTVPVGRVETGIIKPGMVVTFAPQNVTTEVKSVEMHHESLPEAVPGDNVGFNVVSVKDIRRGSVCSDSKQPAKEARTFHAQVIIMNPGQISNGYTPVLDCHTAHIACKFNELKEKVDRRTGKEDFPKFLKSGDAGIVELIPTKPLCVESFTDYAPLGRFAVRD--MRQTVAVGVIKSVEKSDGSSGKVTKSAQKAAPKKK................ 463
3 -104.000[J] COG5256 Translation elongation factor EF-1alpha (GTPase)  ali follow..  30  2..................KIMASQKPHLNLITIGHVDHGKSTLVGRLLYEHGEIPAHIIEEYRKEAEQKGKAT--FEFAWVMDRFKEERERGVTIDLAHRKFETDKYYFTLIDAPGHRDFVKNMITGTSQADAAILVISAREGEGVQTREHAFLARTLGVPQMVVAINKMDATSYSEKRYNEVKADAEKLLRSIGF-KDISFVPISGYKGDNVTKPSPNMPWYKGPTLLQALDAFKVPEKPINKPLRIPVEDVYSITGIGTVPVGRVETGVLKPGDKVIFLPADKQGDVKSIEMHHEPLQQAEPGDNIGFNVIAKNDIKRGDVCGHLDTPPTVVKAFTAQIIVLNPSVIAPGYKPVFHVHTAQVACRIDEIVKTLNPKDGTKEKPDFIKNGDVAIVKVIPDKPLVIEKVSEIPQLGRFAVRD--MGQTVAAGQCIDLEKR................................... 427
4 -99.200[J] KOG0458 Elongation factor 1 alpha  ali follow..  27  142.YYKTTVPTKPKKPHDISAFVKSALPHLSFVVLGHVDAGKSTLMGRLLYDLNIVNQSQLRKLQRESETMGKSS--FKFAWIMDQTNEERERGVTVSICTSHFSTHRANFTIVDAPGHRDFVPNAIMGISQADMAILCVDCSTNAFEQTKEHMLLASSLGIHNLIIAMNKMDNVDWSQQRFEEIKSKLLPYLVDIGFFDNINWVPISGFSGEGVYKIEYTDEWYNGPNLMSTLENAAFKGINKDDPFLFSVLEIIPTSNDLALVSGKLESGSIQPGESLTIYPSEQSCIVDKIQTNHEETDVAIKGDFVTLKLRYPEDIQNGDLAASVDYSIHSAQCFVLELTTFDNRPLLPGTPFILFIGVKEQPARIKRLISFIDKGNTAKKKIRHLGSKQRAFVEIELKRWIPLLTAHENDRLGRVVLRK--DGRTIAAGKISEITQ.................................... 611
5 -98.200[J] KOG0459 Polypeptide release factor 3  ali follow..  25  76.AKEKAAQEKAAKEEAEDVAEANKKRHLNVVFIGHVDAGKSTIGGQILFLSGQVDDRQIQKYEKEAKDKSRES--WYMAYIMDTNEEERLKGKTVEVGRAHFETESTRFTILDAPGHKSYVPNMISGASQADIGVLVISARKGEFEQTREHVQLAKTLGVSKLIVVVNKMDDVNWSKERYDEIEQKMVPFLKASGYNKDVVFLPISGLMGKNMDQRMGQCPWWSGPSFFEVLDSIEIPPRDPNGPFRMPIIDKFK--DMGTVVMGKVESGSIREGDSLVVMPNKEQVKVVAIYCDEDKVKRAGPGENLRVRIIEDEDILSGFVLSSIVNPVPAVTEFVAQLQLLDNAIFTAGYKAILHIHAVVEECEIIELKSQIDLKTRKKKKVLFVKNGAAVVCRIQVTNSICIEKFSDFPQLGRFTLRT--EGKTIAVGKVTELLSSVSSA............................... 532
6 -74.400[J] KOG0460 Mitochondrial translation elongation factor Tu  ali follow..  18  28.SGLINRFTVPARTYADEKVFVRKKPHVNIGTIGHVDHGKTTLTAAITKCLSDL-----------------GQASFMDYSQIDKAPEEKARGITISSAHVEYETANRHYAHVDCPGHADYIKNMITGAATMDGAIIVVSATDGQMPQTREHLLLARQVGVKQIVVYINKVDMVE--PDMIELVEMEMRELLSEYGFDDNTPIVSGSALCALEGRE--PEIGLNSITKLMEAVDSYTLPERKTDVPFLMAIEDVFSISGRGTVVTGRVERGTLKKGAEIEIVGYGSKTTVTGIEMFKKQLDAAVAGDNCGLLLIKREQLKRGMIVAQPG-TVAPHQKFKASFYILTRTGFVDKYRPQLYSRTSDVTVELTHPD--------PNDSDKMVMPGDNVEMICTLIHPIVIEKG------QRFTVRE--GGSTVGTALVTELLD.................................... 439
7 -66.800[J] COG0050 GTPases - translation elongation factors  ali follow..  22  2................SKEKFERTKPHVNVGTIGHVDHGKTTLTAAITTVLAKT-----------------YGGSARAFDQIDNAPEEKARGITINTSHVEYDTPARHYAHVDCPGHADYVKNMITGAAQMDGAILVVAATDGPMPQTREHILLGRQVGVPYIIVFMNKCDMVD-DEELLELVEMEVRELLSAYDFPDDLPVVRGSALKALEGEAEW----EAKIIELAGYLDSYPEPERAIDKPFLLPIEDVFSISGRGTVVTGRVERGIVKVGEEVEIVGIKDKSTCTGVEMFRKLLDEGRAGENVGVLLIKREDIERGQVLAKPGS-IKPHTTFESEVYILSHTPFFKGYRPQFYFRTTDVTGTIELP-----------EGVEMVMPGDNINMIVTLIHPIAMDDG------LRFAIRE--GGRTVGAGVVAKVIA.................................... 394
8 -63.300[J] KOG0466 Translation initiation factor 2, gamma subunit (eIF-2gamma; GTPase)  ali follow..  16  15LSRQDLTTLDVTKLTPLSHEVISRQATINIGTIGHVAHGKSTVVKAI---SGVHTVRFKNELERNIT---KLGYANAKIYQLDDPSCPRPECYRSCGSSMPDEFPVRHVSFVDCPGHDILMATMLNGAAVMDAALLLIAGNESCQPQTSEHLAAIEIMKLKHILILQNKIDLVK--ERQAKEQYEQILAFVQGTVA-EGAPIIPISAQLKYNI------------EVVCEYIVKIPVPPRDFTSEPRLIVIRSFDVNKKGGVAGGSILKGVLKVGQETEVRPGIVSSKIVSLFAEHNDLQYAAPGGLIGVGTLCRADRMVGQILGAVGALPEIFTELEISYFLLRRQKLSKNEVLMVNIGSLSTGGRVS--------------------AVKADLGKIVLTNPVCTEVGE------KIALSRRKHWRLIGWGQIRRGVTIKPTVDDD............................ 472
9 -53.900[R] COG5258 GTPase  ali follow..  18  81LRVSEGIRGKVAEVLLRAVSREEPPPTVTVVALGNVDAGKSTLVGVLTTDGKGLARSYASRYKHEVLTGRTSA--VSLRLLGFSGDKVVNHGLIDPLDEAEYKRSDKLVLLVDVGGHERYLRTALRGLFQPDYVMLVVAANSGVQKMTKEHLGIAVAIGIPVFVV-VTRIDIT--PSEVFQKTVEEVVRILKMPGVSKIAPVFYVSSVTGHGL------------DLLLRFLSLLRRRRWDYGGEFLMYISDIYLVKGVGVVIGGLVEKGILHVGDRVWLGPYSDQTVVKSIHFNRTPVESAKAGSFITVALDKVEKVEKGMVLS--ARPLKAVREVTADVLVLHPTVIRAGFSGVFHYKAVRTGGYIKEI------------DKGELMVGDSGVVKIELSRPWHIDS-------GVFVFRN---GPTRILGRIIGTDGTLSA................................ 517
10 -50.700[J] COG5257 Translation initiation factor 2, gamma subunit (eIF-2gamma; GTPase)  ali follow..  20  2......................KNQSEINIGLVGHVDHGKTTLTKALS------------------------------GVWTDTHSEETKRGISIRLGYADITELLRKVSFVDAPGHETLMATMLSGAALMDGAILVIAANEPCQPQTKEHLMALDVIGVKDVIVVQNKIDIVS--KERALESYREIKEFVKGTCA-EDAPIIPVSAQQGANI------------DILIETIEEIKTPKRDVDKPARMYVARSFDINKAGGVIGGSLVQGRLRVGDEIEIRPGIQVSTITGLVAGGEEMEEVGPGGLVGVGTLTKADSLSGSVAGEPGTLPPVRHSFTMETHLLEREPIKTGEPLMINVGTTTTVGVVK--------------------SARADDADVVLKLPACAEEGQ------RIALSRRVGARLIGYGIIK........................................ 408
11 -49.000[J] COG3276 Selenocysteine-specific translation elongation factor  ali follow..  25  1...........................MIIVTSGHVDHGKTALLKALT------------------------------GTSTAHLPEEKKRGMTIDLGYAYLPLENKVLGFIDVPGHEKFLSNMLAGLGGVHYAMLIVAADEGVAVQTKEHLAILRQLQFHEIIVVITKADRTN--SAQIESLIQTIKQDYSFL---RNANYFVTSAETGQGI------------SELRHYLANL-AELADTQKPFRYAIDRVFSVKGAGTVVTGTAFSGTVKVNDEIYL-STGQKIRIKAIHAQNTSSEQGIAGQRLALNLLDRTPMKRGDWLLQNEP-LPPTDRISVQILAE--VPLNESQPVHIYHGASRTTGKLTLL------------QGKNAAKNDRTLAEIILDSPLFLAFGD------KLILRSGDTKTLIAGARVLEINSPKRHKRTEVRLNFLANLA.................. 363
12 -37.600[T] COG1217 Predicted membrane GTPase involved in stress response  ali follow..  17  3........................ENLRNIAIIAHVDHGKTTLVDKLLKLSGTLDRKEAESER-----------------VMDSNDQEKERGITILAKNTAIKWNGYNINIVDTPGHADFGGEVERVMSMVDSVLLVVDAQDGPMPQTRFVTQKAFKAGLR-PIVVVNKIDRPG---ARPDWVIDQIFDLFDNLGATDEQLDFPISALNGIAGLDHEKMDDNMD-ALFQAIIDHVPAPVVDTEGPFQMQISQLDYNSFLGVIGIGRITRGKVKSNTPVVAISDDGSKRNGRILKQRVEVAEAEAGDIVCVSGMEELFI--SDTLCDPQNVEALPPLTVDQPT----VSMTFQVNDSPFAGREGKFVTSRNIKERLEKELLHNVALRVEPGDSPEKFKVSGRGELHLSVLIE................................................................ 371
13 -35.500[J] KOG0462 Elongation factor-type GTP-binding protein  ali follow..  16  23.......STAGDPTKLVNLSEFTPDKIRNFGIVAHVDHGKSTLADRLLEMCGAVPPGQKQ--------------------MLDKLQVERERGITVKAQTAALRHRGYLLNLIDTPGHVDFSAEVSRSLAVCDGILLLVAANQGVQAQTIANFWLAFEKNIQ-IIPVINKIDL---PGADIKSVETQLKNLF---------------EFNPEECLHISAKSGLNVDKVLEAIIDRVPAPTAIIDAPFRSMIFDSYFDHFRGAIAHIMVKEGSVKKGDKIQSYQNEKVYDVSEVMVKCTELRAGQVGYLVC-NMRTVNEAVVGETLFAETTSRDSVKTFAKPTVYAGLFPVETSDYESLKQAVERLCLNDPSVTVIPDSSKAL---GLGWRIGFLGVLHMEVFGARLSQEYDASVILCQ.......................................................... 400
14 -34.600[M] COG0481 Membrane GTPase LepA  ali follow..  19  2........................KNIRNFSIIAHIDHGKSTLSDRLIQTCGGLSDREMEA-------------------VLDSMDLERERGITITLNYKAKDGETYQLNFIDTPGHVDFSYEVSRSLAACEGALLVVDAGQGVEAQTLANCYTAIEMNLE-VVPILNKIDL---PAADPERVAEEIEDIVG----IDAMEAVRCSAKTGVGI-----------EDVLEEIVHKIPAPEGDPNAPLQALIIDSWFDNYLGVVSLVRIKNGTLRKGDKIKVMSTGQSYNVDRLGITTILNCGEVGWVVCAIKDILGAPV--GDTLTSHNNPASSV-KKVKPQVYAGLFPISSDDYEAFRDALGKLSLNDASLFYEPENSTAL---GFGFRCGFLGLLHMEIIQERLEREYDLDLITTA.......................................................... 367
15 -30.200[J] COG4108 Peptide chain release factor RF-3  ali follow..  16  3..............MSTTPYFGEVSKRRTFAIISHPDAGKTTITEKVLLFGRAI--QVAGTVKGRGSNQHA---------KSDWMEMEKERGISVTTSVMQFPYGDCLVNLLDTPGHEDFSEDTYRTLTAVDSCLMVIDAAKGVEDRTRKLMEVTRLRDTPIVTF-MNKLDREIRDMELMDEVENELAQLREELELVLGAELTPVTALGNFGVDHMLDGLQWAPSPMPRQAAERVVEASEEKFTGFVFKIQANMDPKHRDRIAFVRIVSGTYKQGMKMNHVRLGKQVNISDAVTDRARAEEAFAGDIIGLHNHG--TIQIGDTFTQGETLKFTGIPNFAPELFRRIRLRDPLKQKQLLKG-------LVQLSEEGAVQVFRPLQNNDLIVGAVGVLQFDVVVSRLKSEYNVEAIYEGVNVATARWVECDDVKKFEEFKRKNQS................................ 493
16 -26.200[J] KOG0469 Elongation factor 2  ali follow..  19  13....................MDRKRNIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGSKAGETR-----------------FTDTRKDEQERCITIKSTAISLKYNGFLINLIDSPGHVDFSSEVTAALRVTDGALVVVDCVSGVCVQTETVLRQAIAERIKPVLF-MNKMDRALLEFQTFQRIVENINVIIATYGDDDGPMGPIMVDPSIGNVGFGSGLHGW-AGDTMLQMIFHLPSPVTPNGPLMMYISKMVPTSDKGRFYAFGRVFSGKVATGMKARIQGPNYEKTIQRTILFIEPIEDIPSGNIAGLVGVDQYLVKGGTITTYKDAHNMRVMKFSVSVVRVAVEAKNPADLPKLVEGLK----RLAKSDPMVQCIFEESGEHIIAGAGELACIPLKKSDPVV...................................................................... 571
17 -25.100[J] KOG0468 U5 snRNP-specific protein  ali follow..  15  125....................MDTPPLIRNVALVGHLHHGKTTFVDCLIRQTHPQFETMEERQLR----------------YTDTLFTEQERGCSIKATPVTLKQKSYLLNIFDTPGHVNFSDEATAAMRMSDGVVLFIDAAEGVMLNTERLLKHAVQERQAITVC-INKIDRLILEKLPPQDAYFKLKHIVEEVNPDDNLLVSPILGLWGDMYFNSKTRK---DCSGFVDMCYRDMISCNQYGTLMVHSSKMYPNDDCTFFQVLARIVSGTLHAGQEVRVLGENRILQVGRLWVFESELNRVPAGNWVLIEGIDQCIVKTSTIVDINVPIFRPLKFNTQSIIKIAVEPVNPSELPKMLDGLR----KVNKSYPLLSTRVEESGEHVILGTGELSEIDIKVADPVV...................................................................... 663
18 -23.800[J] COG0480 Translation elongation factors (GTPases)  ali follow..  16  2..................ARINPLEKVRNIGIAAHIDAGKTTTTERILFYSGII--HKIGEVHEGTA-------------VTDWMDQERERGITITAAAISTSWKDYQINIIDTPGHVDFTIEVERSMRVLDGVIAVFCSVGGVQPQSETVWRQADRYKVPRIAF-INKMDRTGAN---FYRVHEQMRDRLRANAIAIQLPIGSENDFKGIVDLVRKRAYMYNNDTKLVEAVSKYFDGEPLTEEEIRSALRKGTIAGTIVPVLCGRVYSGVLKKGSYVLNATKNKKERISRLVLDRQDVEELRAGDLGAALGLK--DTLTGDTITDEGAPVILESFIPEPVISVAVEPKTKNDMDKLSKALQSLSEEDPTFRVNVDPETNQ------TVIAGMGELHLEILVDRMLREFKVEANVGAPQVAYRET.................................................. 482
19 -22.100[J] KOG0465 Mitochondrial elongation factor  ali follow..  19  62..................DDIGRCNKLRNIGISAHIDSGKTTFTERVLYYTKRI------------KAIHEVRGRDNVGAKMDSMDLEREKGITIQSAATYCEGKNYHFNLIDTPGHIDFTIEVERALRVLDGAVLVVCAVSGVQSQTVTVDRQMRRYNVPRVTF-INKMDRMGSD---PFRAIEQLNSKLKIPAAAVQIPIGSESSLSGVVDLINRVAIYNKGDQLLIETLEMFLEEKEPTTQQIKDAIRRSTIARSFTPVLMGRVYQGRLRKGNYITNVKTGKKVKVARLVREMEDVDEVGSGEICATF---GIDCASGDTFTDGSVQYSMSSMYVPDAVVSLSITPNSKDASNFSKALNRFQKEDPTFRVKFDPESKE------TIISGMGELHLEIYVERMRREYNVDCVTGKPQVSYRES.................................................. 548
20 -21.200[J] KOG1145 Mitochondrial translation initiation factor 2 (IF-2; GTPase)  ali follow..  16  183.............................VTIMGHVDHGKTTLL------------DKFRKTQVAAVETG---------------------GITQHIGAFLVSLPSEKITFLDTPGHAAFSAMRARGAQVTDIVVLVVAADDGVMKQTVESIQHAKDAQVP-IILAVNKCDKAEADPEKVKKELLAYDVVCEDYG---DVQAVPVSALTGDNLMALAEAT------ALAEMLE-----KADPNGPVEGTVIESFTDKGRGLVTTAIIQRGTLRKGSVLVA--GKCWAKVRLMFDEGKTIDEAYPSMPVGITGWRDL--SAGEEILEVESEPRAREVVDWRKYEQEQEKGQEDLKIIEEKRKEHKEAHQKAREKYGHLLWKKRSILKEKRERDSNVLSVIIKGDVDGSVEAILNIIDTYDASHECELELVGVGDISA....................................... 558
21 -19.900[E] COG4917 Ethanolamine utilization protein  ali follow..  19  3............................RIAFVGSVGAGKTTLFNALQ----------------------------------NYTLARKTQAVEF-----------NDKGDIDTPGHPRWYHALITTLQDVDMLIYVHGAND---PESRLPAGLLDIGVSKRQIAVISKTDMPDAD-------VAATRKLLLETGFEEPM--FELNSHDPQSV------------QQLVDYLASLTKQEEAGEKT...................................................................................................................................................................................................................................... 155
22 -17.800[J] COG0532 Translation initiation factor 2 (IF-2; GTPase)  ali follow..  16  448.............................VTIMGHVDHGKTTLL------------DRFRESRVTEGEAG---------------------GITQHIGAYQIKANGKKITFLDTPGHEAFTSMRARGASVTDITILVVAADDGVMPQTIEAINHSKAAGVP-IIVAINKIDKPGANPQRVTQELTEHGVFPVAWDPENGSEFVEISAKFNQNLDE------------LLDTVAEVQELKADPTVRAIGTVVEARLDQGKGAIATLLVQQGTLHVQDPIVV--GNTYGRVRTMTNDGRRIKEAGPSTPIELTGLSDV--QAGDHFAVFEDEKAARAAGEERAKRAQLIKRQNTRRVNLD--KADVQGSAEALAASLQKIEVEGVKVDIVHSASESDISLAAASNAIIIGFNVRPTGLAREQAAQEEVDIRLHSIIYKVIEEVETA............................... 837
23 -17.300[R] KOG2486 Predicted GTPase  ali follow..  16  137............................EFALVGRSNVGKSSLLNSLVRRKRLA-------------------------------LTSKKPGKTQCI---NHFRINDKWYLVDLPGYNKFTKDYFLNRSTLVSVFLLVDASIPVKPIDLEYASWLGQNQVP-MTLIFTKCDKRKKKKNGGKKPEANIKEFQDLIQGFF--PWIMTSSVTNQGRDE------------ILLHMAQL................................................................................................................................................................................................................................................ 311
24 -17.100[R] COG3596 Predicted GTPase  ali follow..  13  12LQNSLSGLPLWVSERILQQINQLTHYEPVIGIMGKTGAGKSSLCNALFAGEVSPVSDV--------------------------------AACTRDPLRFRLQIGEHFMTIVDLPGDTEYAALYREQLPRLDLILWLIKADDRALATDEH-RQVIGEAYRHKMLFVISQSDKAEPTSGGNILSTEQKQNISRKICFQPVHPVCAVSVRLQWGLRVMAERM............................................................................................................................................................................................................................................................... 212
25 -15.500[R] COG1084 Predicted GTPase  ali follow..  15  159.......................DLDAFTVVIAGFPNVGKSTLLRTLTGAEPEVAD-----------------------------------FTTKGIQIGHLERKWKRIQVIDTPGLLDELQAMVALENIADVIMFIFDASETCGYTLESQYSLYLGI--IPVVTVFNKMDLAE-NVKYLEEYINMVED------------PLKVSAFEGRGVSKIIKKL............................................................................................................................................................................................................................................................... 321
26 -14.600[R] COG1160 Predicted GTPases  ali follow..  20  196.......DTALIDDALDEELEEEQDKNIKIAIVGRPNVGKSTLTNRILGEDRVVVFDM--------------------------------PGTTRDSIYIPMERDGQQYTLIDTAGEKFSVIKTLQAIQDANVVLLTIDARENISDQDLSLLGFILNAG-RSLVIVVNKWDGL--DQDVKDRVKSELDRRLDFIDFAR---VHFISALHGSGVGN.................................................................................................................................................................................................................................................................... 376
27 -14.100[R] COG0218 Predicted GTPase  ali follow..  15  27............................EIALAGRSNVGKSSFINTML---------NRKNLARTSGKPGK-------------------------TQLLNFFNIDDKMRFVDVPGYGCMIEEYLTTRENLRAVVSLVDLRHDPSADDVQMYEFLKYYEIP-VIIVATKADKIPRGK-----WNKHESAIKKKLNFDPSDDFILFSSVSKAGMDE.................................................................................................................................................................................................................................................................... 186
28 -14.100[U] KOG0090 Signal recognition particle receptor, beta subunit (small G protein superfamily)  ali follow..  13  51......................RRTKSNTVLLSGLSGSGKTVLFYQLR--DGSSHQGAVTSMEPNEGT------------------------FVLHNENNTKKGKVKPVHLIDVPGHSRLISKLEEYLPRAAAVVFVVDALEFLPNIRAASEYLYDILTNASVLLCCNKTDKVTAHTK--EFIRKQMEKEIDKL......................................................................................................................................................................................................................................................................................... 201
29 -13.300[R] COG1159 GTPase  ali follow..  16  11.............................IAIVGRPNVGKSTLLNKLLGQKISITSRKAQTTR------------------------HRIVGI--------HTEGPYQAIYVDTPGNRLMNKAASSSIGDVELVIFVVEGTRWTPDDEMVLNKLRDG---APVILAVNKVDNVQEKVDLLPHLQFLASQM-------NFLDIVPISAETGMNVDTIAGIVHHFPEDYITDRSQRFMASEIIREKLMRFLGAELPYSVTVEIERFVTNERGGYDINGLILVEREGQKAKIKTIGIEARKDMQEMFEAPVHLEL................................................................................................................................................................... 277
30 -13.200[O] KOG0448 Mitofusin 1 GTPase, involved in mitochondrila biogenesis  ali follow..  12  49ATEDDLVEMQGYKDKLSIIGEVLSRRHMKVAFFGRTSSGKSSVINAMLWDTNCFDGDKAYLMTEGSDEKKSVKTVNQLAHALHM-DKDLKAGCLVRVFWPKAKCARDDLVLVDSPGLDSWIDKFC---LDADVFVLVANSESTLMNTEKHFF-VNEWLSKPNIFILNNRWDASASEPEYMEDVRRQVEELKVANALEAQNRIFFVSAKEV......................................................................................................................................................................................................................................................................... 288
31 -12.900[R] COG2229 Predicted GTPase  ali follow..  20  2.........................RENKIIFTGPVGVGKTTAIAAI---------SDEALVQTDASASDMT------------LDRKRNTTVAMDYGAISLD-EDTKVHLYGTPGQERFNFMWEILSQGSMGLVLLLDNARTNPLKDLEFFLFRGLLEKAPVVVGITKMDIR--SQPGIDVYHKYLAK-------NLNVPVFEIDARKEDDVKQ.................................................................................................................................................................................................................................................................... 163
32 -11.800[OK] COG0378 Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase  ali follow..  15  2........................KRPLIIGVGGPVGAGKTMLIERLTYSMAAITNDIYTKEDARILLNTSVLPADRIAGVETGGCPHTAIREDASMNFAAIEEPDLQLLFLESGG--------TFSPDLVDFSIYIIDVAQGEKIPRKGGQGMIKS------LFIINKVDLAPYVGANVEVMKADTLKS------RGNKDFFVTNLKTDEGLKS.................................................................................................................................................................................................................................................................... 190
33 -11.600[U] KOG0076 GTP-binding ADP-ribosylation factor-like protein yARL3  ali follow..  21  14.......................KKEQYSILILGLDNAGKTT----FLETLKKEYSLAFKALEKIQPTVGQNVATIPVD-------------------------SKQILKFWDVGGQESLRSMWSEYYSLCHGIIFIVDSSDDECSTTLQSVVMDEEIEGVPILMLANKQDRQDRMEV--QDIKEVFNKIAEHIS-ARDSRVLPISALTGEGV---KDAIEW............................................................................................................................................................................................................................................................. 181
34 -11.600[TU] KOG1954 Endocytosis/signaling protein EHD1  ali follow..  19  95.............................ILLVGQYSTGKTTFIRYLL------------ESDFPGIRIGPEPTTDRFIAVMHGDEEGSIPGNALDAKKQFRALSGESVTIVDTPG--DFTGVLEWFAERVDRIILLFDAHK--LDISDEFKRCIEALA-DKIRIVLNKSDMVDHQQ--LMRVYGALMWSLGKVFKTPEVSRVYLGSFWDHPLHYDLNRRLFQDEQDLFQDLQALP............................................................................................................................................................................................................................................... 320
35 -11.600[R] KOG1489 Predicted GTP-binding protein (ODN superfamily)  ali follow..  18  337........................KSIADLGLIGLPNAGKSTILNKISNAKPKIGHWQFTTLSP-------------------------------TIGTVSLGFGQDVFTVADIPG-------IIQGASRSNGWVFVLDLSNKDLQLLIEEVGTLEKVKTKNILIVCNKVDIDA-EKSESFAKYLQVEKFSKS----QEWDCVPISALREKT....................................................................................................................................................................................................................................................................... 499
36 -11.500[R] KOG1673 Ras GTPases  ali follow..  17  94...................SSDSDLVSLKISLLGDCQTGKTTFVVKYVGDENQSFLEMT--------------------------------GLNLMDKTFYVQGVTISFSIWDVGGDEKRSKDHIPIACKDAVAILFM-TSRSTLNSVFGWYSQARKWNKTAIPILITKFDDVRLPPNLQWTIVTQARAYAKVMN----ASLFFSSATHNINVNK.................................................................................................................................................................................................................................................................... 257
37 -11.400[U] KOG0096 GTPase Ran/TC4/GSP1 (nuclear protein transport pathway), small G protein superfamily  ali follow..  18  2................SAPAANGEVPTFKLVLVGDGGTGKTTFVKR---------------------------------HLTGEFEKKYIATIGVEVHPLSFYTNFGKFDVWDTAGQEKFGGLRDGYYINAQCAIIMFDVTSRITYKNVPNWHLVRVCENIPIVLCGNKVDVKE------RKVKAKTITFHRKKN----LQYYDISAKSNYNFEK.................................................................................................................................................................................................................................................................... 161
38 -11.400[K] KOG1534 Putative transcription factor FET5  ali follow..  16  6.............................AFVCGVASSGKSTFCGALMSYMKSVGRSCH--------NLDPAAENFEWEPTVDDVMEELDYG-NLDWLNEEIGDYDEDYLIFDMPGQIELIRHLQVTLNFRPCAVYLLESQFLVDRTKFFAGVLSAMSAMVMMINLLSKMDLLK-TNPKFHELNRCIVQLIDDFNM---VNFLPLESGNEESVSR------------VLSYIDDA................................................................................................................................................................................................................................................ 252
39 -11.300[R] KOG1533 Predicted GTPase  ali follow..  14  8.KKQLLRVRVYATSEKGENLGSTHWTMYGVLVIGAPGAGKSTFCAGLTDIFSQTKRPFLTINLDPANDTMAYAPDVNITEMITVNDVMDRLGLNCNWLLQKIEANHKKYLIIDCPGQLELVIRFLEKSGVRLCALHLADSLYCSDPSKFISVALSTLATMVTMVNCLSKADLFSEDGEKYRKLNEAICGVISDFDL---VSFVPLAVENKESMMK------------VIQMVDAA................................................................................................................................................................................................................................................ 280
40 -11.300[R] KOG0394 Ras-related GTPase  ali follow..  16  1...................MPSRRRTLLKVIILGDSGVGKTSLMNQ---------------------------------YVNKKFSNQYKATIGADFLTKEVQFEDRLFTL-DTAGQERFQSLGVAFYRGADCCVLVYDVNSMKREEFLIQASPSDPENFPFVLIG-NKVDVDDGNSRVVSE--KKAKAWCASKG---NIPYFETSAKVGTNVEE.................................................................................................................................................................................................................................................................... 167
41 -11.200[U] KOG0077 Vesicle coat complex COPII, GTPase subunit SAR1  ali follow..  17  18........................QKEAKILFLGLDNAGKTTLLHML------------------------------------KDERLVQHQPTQHPTSEELSIGKIKFKAFDLGGHQIARRVWKDYYAKVDAVVYLVDAYDKEFAESKRE--LDALLSDEAFLILGNKIDIPY-YHLGLTNFTTGKGKVTLGDSGVRPLEVFMCSIVRKMGY---GEGFKW............................................................................................................................................................................................................................................................. 187
42 -11.100[R] KOG0395 Ras-related GTPase  ali follow..  17  12...................LSVPAKNSYRMVVLGASRVGKSSIVSRFL------------------------NGRFEDQYT-PTIEDFHRKVYNIR--------DMYQLDILDTSGNHPFPAMRRLSILTGDVFILVFSDNRESFDEVKRQKQILEVKSCLKMVICGNKNDHGELCRQVPTTEAELLVS-------DENCAYFEVSAKKNTNVDE.................................................................................................................................................................................................................................................................... 181
43 -10.900[R] KOG1490 GTP-binding protein CRFG/NOG1 (ODN superfamily)  ali follow..  18  166........................PNTRTVLICGYPNVGKSSFMNKVTRADVDVQP---------------------YAFT------------TKSLFVGHTDYKYLRYQVIDTPG-EMCSITALAHLRAAVLFFLDISGSCGIAQQAALFHSIKSLFMNKPLVIVCNKTDLMPMENEEDRKLIEEMKAMKTAMGASEEQVLLKMSTLTDEGVMSVKNAA............................................................................................................................................................................................................................................................... 345
44 -10.800[U] KOG0092 GTPase Rab5/YPT51 and related small G protein superfamily GTPases  ali follow..  20  20..........................QFKLVLLGESAVGKSSLVLR---------------------------------FVKGQFHEFQESTIGAAFLTQTVCLDDTKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDTNEESFARAKNWVKELQRQASPNIVIALNKADLANKRAVDFQE--------AQSYADDNSLLFMETSAKTSMNVNE.................................................................................................................................................................................................................................................................... 172
45 -10.700[U] KOG0094 GTPase Rab6/YPT6/Ryh1, small G protein superfamily  ali follow..  18  1..................MASVSPLAKYKLVFLGDQSVGKTSIITR---------------------------------FMYDKFDTTYQATIGIDFLSKTMYLEDRRLQLWDTAGQERFRSLIPSYIRDSSVAVVVYDANRLSFLNTSKWIEEVRNERAGDVIIVLNKTDLVEKRQVSIEE--------GDSKGREYGVMFIETSAKAGFNIKP.................................................................................................................................................................................................................................................................... 161
46 -10.600[T] KOG3886 GTP-binding protein  ali follow..  14  16..GPRMDPPLGEPEGSLGWVLPNTAMKKKVLLMGKSGSGKTSMRSIIFANYIARDTRRLGA----TILDRIHSLQINSSLSTYSLVDSVGNTKTFDVEHSHVRFLGNVLNLWDCGGQDTFMENYFTSQRNVEVLIYVFDVESRELEKDMHYSCLEAILQNSKIFCLVHKMDLV--QEDQRDLIFKEREEDLRRLSRPLECSC--RTSIWDETLYKAWSSI-----YQLIPNVQQLE............................................................................................................................................................................................................................................... 249
47 -10.400[P] COG0370 Fe2+ transport system protein B  ali follow..  16  2.........................SQNTYCILGNPNTGKTSLFNALTGSYEYVGN----------------------------------SGVTVEKKVGTLR--SKTGKLIDLPGDETVVTRFLLE-EKFDCMLNIVDSS-----QIERNLNLTVQL--APVVMGLNMIDVAAGRGIHLN---------IQNLAKKLRIPILPVVARSGKGTEDILSTL............................................................................................................................................................................................................................................................... 157
48 -10.400[R] KOG0074 GTP-binding ADP-ribosylation factor-like protein ARL3  ali follow..  18  14.......................PDQEVRILLLGLDNAGKTTLLKQL------------------------------------ASEDISHITPTQGFNIKSVQSQGFKLNVWDIGGQRKIRPYWKNYFENTDILIYVIDSADEETGQELAELLEEEKLSCVPVLIFANKQDLLTAAPASEIAEGLNLHTIRDR-----VWQIQSCSALTGEGV---QDGMNW............................................................................................................................................................................................................................................................. 172
49 -10.300[R] KOG0075 GTP-binding ADP-ribosylation factor-like protein  ali follow..  18  18........................KEEMELTLVGLQFSGKTTFVNVI--ASGQFAEDMIP---------------------------------TVGFNMRKITRGNVTIKVWDIGGQPRFRSMWERYCRGVNAIVYMVDAADEASRNELHSLLDKPQLAGIPVLVLGNKRDLPGALDETGLIERMNLSSIQDR-----EICCYSISCKEKDNI---DITLQW............................................................................................................................................................................................................................................................. 176
50 -10.200[UZ] KOG0073 GTP-binding ADP-ribosylation factor-like protein ARL2  ali follow..  16  13.......................KERELRLLMLGLDNAGKTTILKKF------------------------------------NGEDIDTISPTLGFNIKTLEHRGFKLNIWDVGGQKSLRSYWRNYFESTDGLIWVVDSADQDCQRELQSLLVEERLAGATLLIFANKQDLPGALSSNAIREALELDSIRSH-----HWCIQGCSAVTGENL---LPGIDW............................................................................................................................................................................................................................................................. 171
51 -10.200[L] KOG1532 GTPase XAB1, interacts with DNA repair protein XPA  ali follow..  14  16.SQKLVDSLDKLRVSAASSSSNFKKKPIIIIVVGMAGSGKTSFLHRL--------VCHTFDSKSHGYNLDPAVMSLPFGANIDEVMKQYNLGTSLNLFATKFDADQLDYVLVDTPGQIEIFTWSASGAIITEVVTYVVDTPRSSSPITFMSNMLYACSILYKTVLAFNKTDVADSDNSYTATLANSLSLSLYE--FYRNIRSVGVSAISGAGMDGFFKAIEASAEEYMETYKADLD............................................................................................................................................................................................................................................... 296
52 -10.100[U] KOG3887 Predicted small GTPase involved in nuclear protein import  ali follow..  17  37.SSDADPDSGTEEGVLDFSDPFSTEVKPRILLMGLRRSGKSSIQKVVFHKMSPNETLFLES--------------------------------TNKICREDVSSSFVNFQIWDFPGQIDFFDPTFD--RGTGALIFVIDSQDDYMEALARLHLTVTRA---NFEVFIHKVDGLDHKIETQRDIHQRANDDLADAGLEKIHLSFYLTSIYDHSIFEAFSKV-----QKLIPQLPTLE............................................................................................................................................................................................................................................... 245
53 -10.100[U] KOG0086 GTPase Rab4, small G protein superfamily  ali follow..  24  8..........................LFKFLVIGSAGTGKSCLLHQ---------------------------------FIENKFKQDSNHTIGVEFGSRVVNVGGKKLQIWDTAGQERFRSVTRSYYRGAAGALLVYDTSRETYNSLAAWLTDARTLASPNIVVILNKKDLDPEREVTFLE--------ASRFAQENELMFLETSALTGENVEE.................................................................................................................................................................................................................................................................... 160
54 -10.100[U] KOG0071 GTP-binding ADP-ribosylation factor Arf6 (dArf3)  ali follow..  18  18.......................SNKEMRILMLGLDAAGKTTILYKL------------------------------------KLNQSVVTIPTVGFNVETVTYKNIKFNVWDVGGQDKIRPLWRHYFTGTKGLIFVVDSADSEARQELHRIISDREMRDCLLLVLANKQDLPGALSPAQITDVLQLDKLKDR-----LWNVQPTCALTGDGL---LEGLAW............................................................................................................................................................................................................................................................. 176
55 -10.000[U] KOG0097 GTPase Rab14, small G protein superfamily  ali follow..  20  11..........................IFKYIIIGDMGVGKSCLLHQ---------------------------------FTEKKFMADCPHTIGVEFGTRIIEVSGQKLQIWDTAGQERFRAVTRSYYRGAAGALMVYDTRRSTYNHLSSWLTDARNLTNPNTVIILNKADLEAQRDVTYEE--------AKQFAEENGLLFLEASAKTGENVED.................................................................................................................................................................................................................................................................... 163
56 -10.000[T] KOG4252 GTP-binding protein  ali follow..  20  1..................MLEEDMEVAIKMVVVGNGAVGKSSMIQR---------------------------------YCKGIFTKDYKKTIGVDFLERQIQVNDERLMLWDTAGQEEFDAITKAYYRGAQACVLVFSTDRGSFEAVSSWREKVVAEVGDIPTVLVNKIDLLDDSCIKNEE--------AEALAKRLRLRFYRTSVKEDLNVNE.................................................................................................................................................................................................................................................................... 160
57 -10.000[U] KOG0072 GTP-binding ADP-ribosylation factor-like protein ARL1  ali follow..  18  14.......................GSREMRILILGLDGAGKTTILYRL------------------------------------QVGEVVTTIPTIGFNVEQVTYKNLKFQVWDLGGQTSIRPYWRCYYSNTDAIIYVVDSADGISKDELLYMLREEELAGAILVVLANKQDMDGCMTVAEVHHALGLENLKNR-----TFQIFKTSATKGEGL---DQAMDW............................................................................................................................................................................................................................................................. 172
58 -9.950[R] KOG0091 GTPase Rab39, small G protein superfamily  ali follow..  19  1..................MVEPIFEYQFRLILIGDSTVGKSSLLKFFTDGKFAELSDPTVGVDFFARLIEMKDGTQIKLQLWDTAGQERFRSIT----KSYYRNSVGVLLVYDISNHASFMMEAQRHIEPHRPVFALVG----------------------------CKLDLINAGGHR-EVTTEEAQKFAKQHG----LHFVETSARSGANVEE.................................................................................................................................................................................................................................................................... 166
59 -9.920[U] KOG0087 GTPase Rab11/YPT3, small G protein superfamily  ali follow..  21  10..........................LFKTVLIGDSGVGKSNLLMR---------------------------------FTRNEFNIESKSTIGVEFATRNIVLDNKKAQIWDTAGQERYRAITSAYYRGAVGALIVYDTKQSSFDNVGRWLKELREHADSNIVIMLNKTDLLHLRAVSTEE--------AQAFAAENNLSFIETSAMDASNVEE.................................................................................................................................................................................................................................................................... 162
60 -9.920[R] KOG0088 GTPase Rab21, small G protein superfamily  ali follow..  16  12..........................KFKIVLLGEGCVGKSSLVLR---------------------------------FVENKFSCKHLSTIQASFQNKTVNVEDCDLHIWDTAGQEKYHALGPIYYRGSNGVLLVFDTDRKSFEKVKNWVLEIKTCLGNTAEILINKIDLEEERQVTRQD--------AEAYAESEGALYMETSAQDNVGISD.................................................................................................................................................................................................................................................................... 164
61 -9.890[R] COG1100 GTPase SAR1 and related small G proteins  ali follow..  18  15.......................SNKELRILILGLDGAGKTTILYRL------------------------------------QIGEVVTTKPTIGFNVETLSYKNLKLNVWDLGGQTSIRPYWRCYYADTAAVIFVVDSTDSTASKELHLMLQEEELQDAALLVFANKQDQPGALSASEVSKELNLVELKDR-----SWSIVASSAIKGEGI---TEGLDW............................................................................................................................................................................................................................................................. 173
62 -9.870[U] KOG0070 GTP-binding ADP-ribosylation factor Arf1  ali follow..  17  14.......................AKKEMRILMVGLDAAGKTTILYKL------------------------------------KLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNA------AEITDKLGLHSLRQRHWYISTCATSGEGL---YEGLDW............................................................................................................................................................................................................................................................. 172
63 -9.820[U] KOG0095 GTPase Rab30, small G protein superfamily  ali follow..  19  1..................MSMEDYDFLFKIVLIGNAGVGKTCLVRR---------------------------------FTQGLFPPGQGATIGVGFMIKTVEINGEKLQIWDTAGQERFRSITQSYYRSANALILTYDTCEESFRCLPEWLREIEQYASNKVITVLNKIDLAERREVSQQR--------AEEFSEAQDMYYLETSAKESDNVEK.................................................................................................................................................................................................................................................................... 161
64 -9.810[U] KOG0098 GTPase Rab2, small G protein superfamily  ali follow..  19  6..........................LFKYIIIGDTGVGKSCLLLQ---------------------------------FTDKRFQPVHDLTIGVEFGARMVTIDGKKLQIWDTAGQESFRSITRSYYRGAAGALLVYDTRRDTFNHLTSWLEDARQHSNSNMVIMLNKSDLEARREVKREE--------GEAFAREHGLVFMETSAKTAANVEE.................................................................................................................................................................................................................................................................... 158
65 -9.770[R] KOG0080 GTPase Rab18, small G protein superfamily  ali follow..  22  8..........................TLKILIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKVKTISVDGNKAKLA-IWDTAGQERFRTLT----PSYYRGAQGVILVYDVTRRDTFLNELETYCTRNDIVNMLVG----------------------------NKIDKENREVDR-----NEGLKFARKHS----MLFIEASAKTCDGVQC.................................................................................................................................................................................................................................................................... 160
66 -9.750[U] KOG0093 GTPase Rab3, small G protein superfamily  ali follow..  20  22..........................MFKILIIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTIYRNDKRIKLQ-IWDTAGQERYRTIT----TAYYRGAMGFILMYDITNEESFNATQIKTYSWDNAQVLLVG----------------------------NKCDMEDERVVSSER---------RQLADHLGFEFFEASAKDNINVKQ.................................................................................................................................................................................................................................................................... 174
67 -9.660[TU] KOG0078 GTP-binding protein SEC4, small G protein superfamily, and related Ras family GTP-binding proteins  ali follow..  20  1..................MSTKSYDYLIKLLLIGDSGVGKSCLLLRFSEDSFTPSFITTIGIDFKIRTIELDGKRIKLQ-IWDTAGQERFRTIT----TAYYRGAMGILLLYDVTDKKSFDNSNVEQHASENVYKILIG----------------------------NKCDCEDQRQVSFEQ---------QALADELGVKFLEASAKTNVNVDE.................................................................................................................................................................................................................................................................... 161
68 -9.640[U] KOG0081 GTPase Rab27, small G protein superfamily  ali follow..  17  1..................MSDGDYDYLIKFLALGDSGVGKTSVLYQYTDGVGIDFREKRVVYRASGPDGATGRGQRIHLQLWDTAGQERFRSLT----TAFFRDAMGFLLLFDLTNEQSFISQLQMHAYCENPDIVLCG----------------------------NKSDLEDQRVVKEEE--------AIALAEKYGIPYFETSAANGTNISQ.................................................................................................................................................................................................................................................................... 172
69 -9.610[TU] KOG0084 GTPase Rab1/YPT1, small G protein superfamily, and related GTP-binding proteins  ali follow..  22  8..........................LFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQ-IWDTAGQERFRTIT----SSYYRGAHGIIVTYDVTDLESFNNNEIDRYASENVNKLLVG----------------------------NKCDLTSQKVVSTET--------AKAFADELGIPFLETSAKNATNVEE.................................................................................................................................................................................................................................................................... 160
70 -9.580[R] KOG0083 GTPase Rab26/Rab37, small G protein superfamily  ali follow..  18  443.KNAGRALIRMISSSKAPEEEDEFDIMGKVIMLGDSGVGKTSLLIRF------------------------RDGRYVPSYFLSTV------GIDFRNKVVVVDGTRVKLQIWDTAGQERF--RSVTHARDAHALLLLYDTNKTTYDNIRAWLGEIREYAQEDVVIVLNKADCSGSERQVKREDGERLGR-------EHNVPFMETSAKTGLNVEL-----------SFTAVARQLKSRGYEHGDDGKFNVHDFVRDNTKARSVCAQCRN.............................................................................................................................................................................................................. 665
71 -9.310[R] KOG0079 GTP-binding protein H-ray, small G protein superfamily  ali follow..  20  10..........................LFKLLIIGDSGVGKSSLLLR---------------------------------FADNTFSENYITTIGVDFKIRTMDINGQKLQIWDTAGQERFRTITSTYYRGTHGVVVVYDTNGESFGNVKRWLQEIENNCDSVQKVLVNKCEENERRVVLESD--------ARNYAQSMNISFFETSAKEDKNVEP.................................................................................................................................................................................................................................................................... 161
72 -9.310[F] COG1618 Predicted nucleotide kinase  ali follow..  14  4....................EGKEKTMLRIAVTGSPGVGKSTVVAKTAEKLAEKPGFKIGGIRTAEIRKEGHREGFSIRDLATGKTGILSHVKGSGPRLGKYNALACDLVVIDEIGPME-----LISQSFVSAVEEVLESDKPVLAVLHHSSRLAQRFRKGFEVLTVDKGNRDELPEKITNRFLRKLG............................................................................................................................................................................................................................................................................................... 184
FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Veeramalai M, Ye Y, Godzik A. TOPS++FATCAT: fast flexible structural alignment using constraints derived from TOPS+ Strings Model. BMC Bioinformatics. 2008 Aug 31;9(1):35