FFAS03 results for COG4754

Query: [S] COG4754 Uncharacterized conserved protein, from VFDB

Results of FFAS03 search in VFDB
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.

						`. 10 . 20 . 30 . 40 . 50 . 60 . 70 . 80 . 90 . 100 . 110 . 120 . 130 . 140 . 150 .`
#	Score	Template	Links and tools	%id	First	`MTEVIDPNARIADLVGLLYVMNNIFDGKTDLYQLEKEMEVDIDDLMPIVYTASRLGFVSAESGDIIVTEEGKEYIRASIKRRKEIIREALRNIEPFRTALDLRNFDCETLMENLQRKGVQTFNSPSGKHDLEVILIEWGVYSGLLRKDDDGFSVVS`	Last
1	-71.600	`[S] COG4754 Uncharacterized conserved protein`	`ali`	100	1	`MTEVIDPNARIADLVGLLYVMNNIFDGKTDLYQLEKEMEVDIDDLMPIVYTASRLGFVSAESGDIIVTEEGKEYIRASIKRRKEIIREALRNIEPFRTALDLRNFDCETLMENLQRKGVQTFNSPSGKHDLEVILIEWGVYSGLLRKDDDGFSVVS`	156
2	-13.600	`[S] COG3373 Uncharacterized protein conserved in archaea`	`ali follow..`	14	21	`...............KVLFYLLSIYPYRSYLSEISRAVKSDPSNVKGCLESLIGLGLVIVEQSKFKINPEIVEEVRNMKNMFSDKKVYTV..................................................................`	110
3	-12.400	`[K] COG4742 Predicted transcriptional regulator`	`ali follow..`	10	16	`.................RDLLLLLGEEPRTMEDIKVLLDVSPTAILPQIKRLTDSNLVIQKNGSYELTDMGEQVFKK...............................................................................`	75
4	-11.700	`[S] COG3388 Uncharacterized protein conserved in archaea`	`ali follow..`	14	17	`..........LKRHISVINVLLR--EQPIGIIKLSQETGIPEHKIRYSLRILEQENIISPSREGAILTPDFIEHKEQIIADAEKVLEEATKIAEDVRKMLE.......................................................`	105
5	-11.600	`[K] COG5631 Predicted transcription regulator, contains HTH domain (MarR family)`	`ali follow..`	11	88	`................ILHSIRH-RDREKKLADICLALDIDTHIATYAIRKLEKAGLLTTGKAAVKITAKGAEACAHYAQIRERLLVDSTANARPSEETLSELAALLRFMSGAF-----------NQATRSAITL.....................`	199
6	-11.400	`[K] COG1321 Mn-dependent transcriptional regulator`	`ali follow..`	17	8	`.........RIEEYLETILYLITKNQGPAKTKQIAEELNVSSPSVTEMIKKLHSMGFVEYKPQGVELTEKGAEEA-----------VRIKRKHQVLETFLADVLDFDRKEAHREACE-LEHAVSDSVLERLYDFL.....................`	122
7	-11.300	`[K] COG3432 Predicted transcriptional regulator`	`ali follow..`	9	37	`..............MEIMFDILRNCEPKCGITRVIYGAGINYVVAQKYLDQLVKVGALNIKTENYEITEKGKLLRTH--EEFIKIRENLYSAKEKVSELLRTDSE...................................................`	130
8	-10.700	`[KH] COG1339 Transcriptional regulator of a riboflavin/FAD biosynthetic operon`	`ali follow..`	10	1	`.....MKMKTLFLLIKLAKMGAIGKEITVTMRELSRELDVSPQTVLRWLEELKEQGYIHKRESRVELTEKGINLLEKLYEEISTALYSGF..................................................................`	89
9	-10.500	`[K] COG1846 Transcriptional regulators`	`ali follow..`	14	47	`................TIDAIGT--DEGLLMKELAERLGVTKGAVSQLVDRLEAKALVRRTAHPVVLTDKGREAYRAHADMHAAFYEELQQEIAIFEQCVSKLRDI..................................................`	146
10	-9.810	`[K] COG2345 Predicted transcriptional regulator`	`ali follow..`	10	20	`...............KILLILLE--RAPVIASDIAEQLQLSTVGVRRHLDNLVEENLAEAANPRYRLTDKGRSIFGHEYDSLAAAALATLREVGGDDAVRQFARKRIETIVEGITPADVTDQSIEDTAKSLVEAFSRHG-YAATVDATRNGLQL..`	170
11	-9.600	`[S] COG2469 Uncharacterized conserved protein`	`ali follow..`	16	203	`..................QILTMVYTG-VDSVSVESILGVTTEELNKMYDRLVNLGLARVVKKEIELTPRGVALVSEIMKKAAR........................................................................`	269
12	-9.280	`[K] COG1497 Predicted transcriptional regulator`	`ali follow..`	12	14	`...............QILSEIAM-RQPYVRQKDIADKLGVTVQAVSENIKSLIAEGLVESGSGRYKITRRGAEKIKEAAMDLRRYADEVLESMSFYRSVWPAIAWEDLQEGDKVELFM......................................`	117

FFAS is supported by the NIH grant R01-GM087218-01

jobs submitted since Jan 1, 2011

Comments and questions to: webmaster