FFAS03 results for COG4768

Query: [R] COG4768 Uncharacterized protein containing a divergent version of the methyl-accepting chemotaxis-like domain, from VFDB

Results of FFAS03 search in VFDB
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.

						`. 10 . 20 . 30 . 40 . 50 . 60 . 70 . 80 . 90 . 100 . 110 . 120 . 130 . 140 . 150`
#	Score	Template	Links and tools	%id	First	`MIVILYIAALIAAIALLVIAIYLGKTLKSTSQTMDEVAKSLEKITVEVQGITGQSQKLLDKTNTLLEDVNGKVAKVDPVFDAVGDIGTSLLGLSQSVRELATLATNKVEQNEAKISQAVSISNSILSFREKMKANKAAKEAAKEAREQSNF`	Last
1	-52.300	`[R] COG4768 Uncharacterized protein containing a divergent version of the methyl-accepting chemotaxis-like domain`	`ali`	100	1	`MIVILYIAALIAAIALLVIAIYLGKTLKSTSQTMDEVAKSLEKITVEVQGITGQSQKLLDKTNTLLEDVNGKVAKVDPVFDAVGDIGTSLLGLSQSVRELATLATNKVEQNEAKISQAVSISNSILSFREKMKANKAAKEAAKEAREQSNF`	151
2	-9.550	`[U] KOG3838 Mannose lectin ERGIC-53, involved in glycoprotein traffic`	`ali follow..`	14	317	`........................RELRQIWQGQSQIADHLRELSRKVDEIIGRQETTLSLVSRNAGQALPPPSDVDLLLTNQNMLLSSIREIRQLVGDINVRTDNIQTNQKHAPTAQIQ...............................`	429
3	-9.490	`[U] COG5314 Conjugal transfer/entry exclusion protein`	`ali follow..`	8	1	`.MMRRRFLSGLITLSLIAKPM-YAQNVLTAARSLEQINNQIQSLQNQATVLQNMARNLQGLDFSSVGQLTGSLQRIDGLMDQASGLSFDLNKLQDQWRNQYPESYDATIKVSDVASAARDRWQ............................`	138
4	-9.110	`[R] COG4980 Gas vesicle protein`	`ali follow..`	10	1	`MASGRSLLTGLFVGGIIGGAAVLLTAPSSGKQLREKMKTNYDSFEETIKRLKSDGLALKDQLIKAAKESTDVIKDVGELQTSIKKWQEEIKPHQQDLQKEIADIEEKIRQLEKTLQN..................................`	118
5	-8.430	`[U] KOG0946 ER-Golgi vesicle-tethering protein p115`	`ali follow..`	8	871	`..........................RTAIKEQLDSSNSTIAILQTEKDKLELEITDSKKEQDDLLVLLADQDQKILSLKNKLKDLGHPVEEEDELESGDQEDEDDESEDPGKDLDHI.................................`	962
6	-8.220	`[U] KOG3065 SNAP-25 (synaptosome-associated protein) component of SNARE complex`	`ali follow..`	13	193	`..................................PHLRAYHQKIDSNLDELSMGLGRLKDIALGMQTEIEEQDDILDRLTTKVDKLDVNIKSTERKVRQL...................................................`	258
7	-8.200	`[S] COG3883 Uncharacterized protein conserved in bacteria`	`ali follow..`	12	5	`............TFIAISLAAVISLTPAFTTNVFADVNTDIQNQDKKINDIKSKKTGLQSDLSSLVADLEKAQEKAKSLQGEFDQTGKELKQLNQDIKDINERIKERETVLKERARAMQK...............................`	112
8	-8.100	`[S] COG3105 Uncharacterized protein conserved in bacteria`	`ali follow..`	10	1	`..MFMTWEYALIGLVVGIIIGAVARFGNRKLRQQQALQYELEKNKAELDEYREELVSHFARSAELLDTMAHDYRQLY------QHMAKSSSSLLPE.......................................................`	89
9	-7.910	`[U] KOG3202 SNARE protein TLG1/Syntaxin 6`	`ali follow..`	6	126	`..............................AVNRQYQEQLYQQQDVMLDGVYDTIGNIRGQAALMGEELGQQADLLDTLDNSIETTNSKLRRGMKRLKDFTIASADS............................................`	202
10	-7.800	`[U] KOG0412 Golgi transport complex COD1 protein`	`ali follow..`	11	12	`.......................IGTNEQVDETLQRIADEEAKVNEKLESLLAKQCQIMSGIGRSLSLLHTVDSDSNKLNDQIVNTAQLAESVSAKVRRL-DLARCRASECQQRVHDLIDLHLCSQGVVKAIGEEDYEKSAT.........`	132

FFAS is supported by the NIH grant R01-GM087218-01

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