FFAS03 results for COG4807

Query: [S] COG4807 Uncharacterized protein conserved in bacteria, from VFDB

Results of FFAS03 search in VFDB
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.

						`. 10 . 20 . 30 . 40 . 50 . 60 . 70 . 80 . 90 . 100 . 110 . 120 . 130 . 140 . 150 .`
#	Score	Template	Links and tools	%id	First	`MLSNDILRSVRYILKANNNDLVRILALGNVEATAEQIAVWLRKEDEEGFQRCPDIVLSSFLNGLIYEKRGKDESAPALEPERRINNNIVLKKLRIAFSLKTDDILAILTEQQFRVSMPEITAMMRAPDHKNFRECGDQFLRYFLRGLAARQHVKKG`	Last
1	-78.800	`[S] COG4807 Uncharacterized protein conserved in bacteria`	`ali`	100	1	`MLSNDILRSVRYILKANNNDLVRILALGNVEATAEQIAVWLRKEDEEGFQRCPDIVLSSFLNGLIYEKRGKDESAPALEPERRINNNIVLKKLRIAFSLKTDDILAILTEQQFRVSMPEITAMMRAPDHKNFRECGDQFLRYFLRGLAARQHVKKG`	156
2	-10.600	`[ZD] KOG0028 Ca2+-binding protein (centrin/caltractin), EF-Hand superfamily protein`	`ali follow..`	13	75	`..SEAQKCDIKEAFDIEVKELKVAIRALGFEPKKEEIKRMISDIDKDCSGRIAFNVFLQLMTIKMAEKDTKEEILKAFRLFDDDDTGKI----------SFRNLKRVARELGETLTDEELREMIDEADLDNDGEVNQEEFLRIMK...........`	216
3	-7.810	`[Z] KOG0030 Myosin essential light chain, EF-Hand protein superfamily`	`ali follow..`	12	33	`...............ILYSQCGDVMRALGQNPTNAEVLKVLGKSDEMNVKVLDFEHFLPMLQTVAKNKDQGTYEDYVEGLRVFDKEGN---------TVMGAEIRHVLVTLGEKMTEEEVEMLVAGHEDSNGCINYEAFVRHILSG..........`	157
4	-7.700	`[T] KOG0027 Calmodulin and related proteins (EF-Hand superfamily)`	`ali follow..`	9	46	`..TRKELKEYRQLFNIGNEELKQAMISIGLHANKAEIDNVIKEVDADGNGEIDFEEFCACMKKSQNIVKSTNEELIRECFEIFDQDRN---------IITENEFKYIAKEFG-DFDDELAEKVFRELDVSANGHLSADQFATIVE...........`	188
5	-6.540	`[Z] KOG0031 Myosin regulatory light chain, EF-Hand protein superfamily`	`ali follow..`	14	22	`MFDQTQIQEFKEAFTIDKEDLRDTFAAMGRLNVKNEE---LDAMMKEASGPINFTVFLTMFGEKLKGADPEDVITGAFKVLDPEGKGTI----------KKKFLEELLTTQCDRFSQEEIKNMWAAFPPDVGGNVDYKNICYVIT...........`	162
6	-5.710	`[S] KOG0043 Uncharacterized conserved protein, contains DM10 domain`	`ali follow..`	10	616	`...............LPEVKVRSALRGCRLPFSLELIDNILSILNRNECDDIEVCDLMNFIDVSCGKGCDMLPVNHAFELCPKIPFLNKGRVVNFTCFLRELNLPLNLPAGGEKNNDAIAE...................................`	721
7	-5.470	`[UT] KOG0662 Cyclin-dependent kinase CDK5`	`ali follow..`	13	47	`....SALREICLLKELKHKNIVRLIDVL-FEHCDQDLKKYFDSLNGEIDMAVCRSFMLQLLRGLAFCHSHN--------LHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCYSAEVVTLWYRPPD............................`	171
8	-5.220	`[DKL] KOG0659 Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7`	`ali follow..`	14	56	`....TALREIKLLKELNHPHIVELIDAF-FEYMQTDLEAVIRDRNIFLSPGDIKSYMLMTLKGLAYCHKKW--------LHRDMKPNNLLIGENGLLKLADFGLARLFGSPNRRFTHQVFATWYRAPE............................`	180
9	-5.200	`[J] KOG1762 60s acidic ribosomal protein P1`	`ali follow..`	13	1	`MASLSELAYIYSALILHNDKINALIKAAGVNVEPFWPGVFAKALANVSIGNP........................................................................................................`	52
10	-5.040	`[R] KOG0594 Protein kinase PCTAIRE and related kinases`	`ali follow..`	15	47	`....TAIREISLLKELKHPNIVRLLDVV-FEFLSQDLKKYM---DSTPGSELPLHLIKSYLFQLL---QGVSFCHSHRVIHRDLKPQNLLINELGAIKLADFGLARAFGVPLRTYTHEVVTLWYRAPE............................`	172

FFAS is supported by the NIH grant R01-GM087218-01

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