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Query: [E] COG4812 Ethanolamine utilization cobalamin adenosyltransferase, from VFDB

Results of FFAS03 search in VFDB
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MKDFITEAWLRANHTLSEGAEIHLPADSRLTPSARELLESRHLRIKFIDEQGRLFVDDEQQQPQPVHGLTSSDEHPQACCELCRQPVAKKPDTLTHLSAEKMVAKSDPRLGFRAVLDSTIALAVWLQIELAEPWQPWLADIRSRLGNIMRADALGEPLGCQAIVGLSDEDLHRLSHQPLRYLDHDHLVPEASHGRDAALLNLLRTKVRETETVAAQVFITRSFEVLRPDILQALNRLSSTVYVMMILSVTKQPLTVKQIQQRLGETQLast
1 -116.000[E] COG4812 Ethanolamine utilization cobalamin adenosyltransferase  ali  100  1MKDFITEAWLRANHTLSEGAEIHLPADSRLTPSARELLESRHLRIKFIDEQGRLFVDDEQQQPQPVHGLTSSDEHPQACCELCRQPVAKKPDTLTHLSAEKMVAKSDPRLGFRAVLDSTIALAVWLQIELAEPWQPWLADIRSRLGNIMRADALGEPLGCQAIVGLSDEDLHRLSHQPLRYLDHDHLVPEASHGRDAALLNLLRTKVRETETVAAQVFITRSFEVLRPDILQALNRLSSTVYVMMILSVTKQPLTVKQIQQRLGETQ 267
2 -43.900[S] COG2096 Uncharacterized conserved protein  ali follow..  18  2...........................................................................AADMVKLNKIYTRTGDKGTTALVSGPRRLKHDLRVEAYGTVDETNSAIGIARLHTSETLDAMLFRIQNDLFDLGADLATPDNGEPLSIVESQVMRLENEIDELNAALEPLTSFVLPGGSAAAANLHMARTVCRRAERLMVELSVTDN-EIVSPAALKYANRLSDFLFVAARFT---NEAGRADILWVPGKNR 196
3 -18.100[E] COG4766 Ethanolamine utilization protein  ali follow..  25  1MKKLITANDIREAHARGEQAMSVVLRASIITPEAREVADLLGFTITECDELIPVTASVPASVPADKTESQR.................................................................................................................................................................................................... 71
4 -5.750[K] KOG1414 Transcriptional activator FOSB/c-Fos and related bZIP transcription factors  ali follow..  15  1MDTAGDMDHL-ASVSFGDFETKSPEGDKS-TPTPTRLIKNDEVGLFEDLQHVNPFDIGFQQAAERNVSGTPSRPEA............................................................................................................................................................................................... 83
5 -5.460[L] COG0582 Integrase  ali follow..  10  1MSMAITDAWLRATNGKPYSGKTEISHRFRVSPKGKITWVYRAMKLRDAIQARESRAELVELGFDPRKSTRSANDDSIITLNDLIDYWAENHARDNIKQCDALLKMFHTDI-TLGNAKQLELIMPVFLKAKRRVSAKHSANLMTRFKQVLSYAVRHGLLKYNVLTELKKADVGVPTQGVKALWKAIDDISIHESNKNFLRL-MLIFANRSNELRLAKTVPEENNKVRKKQGGAIRRAIPPLAEKII...................... 289
6 -5.350[E] COG0040 ATP phosphoribosyltransferase  ali follow..  12  6....................TMAMPKG-RIFEEAAGLLRQAGYRLPEEFEDSRKLIIDVPEENLRFILAKPMD---------VTTYVEHGVADV-GIAGKDVMLEEERDVYEVLDLNISKCHLAVAGLPNTDWSGVAP-RIATKYPNVASSYFREQGEQVEIIKLNGSIELAPLI-------GLADRIVDIVSTGQTLKENGLVETEHICDITSRFIVNPVSYRMKDDVIDEMASRLSLVV.......................... 207
7 -5.340[R] KOG3362 Predicted BBOX Zn-finger protein  ali follow..  10  1.MK-IAQSKLKNRLSSKLFKNSYLNQPRSIEVGGRHFSDIKCAFSKLIFLFLSTILISKMFAPSRKPAATANQ--------------LRASSRISNLEGNRTLDENARRNRRNRQLDGLEQ.................................................................................................................................................. 117
8 -5.280[Z] KOG2530 Members of tubulin/FtsZ family  ali follow..  7  1MREIVTANFVGSHFWNFQDELLGLASDPTYTP--RLVSVNLKGALGTMSSRGTLYNEGSSSRSDSSATWFGDVDTQRSEPRKRNLFLQSLYEEEHVVGKEKAKEIEDKDIVGCLD-EEVECWTDFSKSHYHPQSLYELNGLWMDSQAFNNYGIGKDVFSEASRGEEICDRLRFFVEECDQGIKFLVDDSGGFSAVAADFLENMADEYTNVPVLLYSVRTPMSQMSSKKTVSNKLHDACKLFTPI....................... 285
9 -5.140[S] KOG4542 Predicted membrane protein  ali follow..  17  78.......................LYVGTLISKNFAALLEEHDIFVPEDDDDD....................................................................................................................................................................................................................... 106
10 -5.070[S] COG4343 Uncharacterized protein conserved in archaea  ali follow..  7  1MVYFLNELEHKFLTLEKPYYNVKLPMYLIYCPTSRDVYLTMVEKVRGEESFPVSLGKAIHEAVAKAIREAKSKNFSAEPPNYDNEMINVAVKAVWEYTMSLCQSSYLKVRSEQPYATEEGVLLTSMPFLVEHRMDGSLLGCSGLISVDCYDYLRNVVFDLKVGEFNEEMRLYTTGYALESIHEIP----------DVGCIISITFNGERMRVSKDLHYIDAN---LRSWWIEERDRKAEIV.......................... 258
FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Plewczynski D, Tkacz A, Godzik A., Rychlewski L. A support vector machine approach to the identification of phosphorylation sites. Cell Mol Biol Lett. 2005;10(1):73-89.