FFAS03 results for COG5507

Query: [S] COG5507 Uncharacterized conserved protein, from VFDB

Results of FFAS03 search in VFDB
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.

						`. 10 . 20 . 30 . 40 . 50 . 60 . 70 . 80 . 90 . 100 . 110 .`
#	Score	Template	Links and tools	%id	First	`MAYVDGFLVAVPTANIEAYKKLASAAGAVWKEHGALNYVECLADDVPYGELTSFPRAVQAKDDETVVFSWIVYRSRQDRDAIVAKVMADPRLQGDEWKSIFDGKRMIYGGFEPFLEL`	Last
1	-79.800	`[S] COG5507 Uncharacterized conserved protein`	`ali`	100	1	`MAYVDGFLVAVPTANIEAYKKLASAAGAVWKEHGALNYVECLADDVPYGELTSFPRAVQAKDDETVVFSWIVYRSRQDRDAIVAKVMADPRLQGDEWKSIFDGKRMIYGGFEPFLEL`	117
2	-6.660	`[K] KOG3152 TBP-binding protein, activator of basal transcription (contains rrm motif)`	`ali follow..`	8	52	`.....CYLSRIPPHMDH------VRLRHILAQYGELGRIYLAPEADTFVYCYSDSEAQVHRRGQRFSEGWVEFAKKSVAKRVADMLNG.............................`	134
3	-6.130	`[G] COG3405 Endoglucanase Y`	`ali follow..`	9	57	`QSY--GMFFALAANDRAAFDNILDWTQNNLAQGSLKERLPAWLWGKKENSKWEVLDSNSASDGDSLLEAGRLWKEQRYTDIGSALLKR.............................`	147
4	-6.090	`[R] COG2329 Uncharacterized enzyme involved in biosynthesis of extracellular polysaccharides`	`ali follow..`	10	3	`...YEIAMLPVQKDKISEFRQAFGDVVPLLKRAGYRGH-----------------VLAQGVETPEVFNLIVRWRSLNDHTPGFEASEDHEQFMEGIQDYFSGEPTV...........`	89
5	-5.760	`[J] KOG2314 Translation initiation factor 3, subunit b (eIF-3b)`	`ali follow..`	13	59	`.....IVVDHLPVVPKEKFEKLEGVVKKIYNQLGVIKE-------------NGLLMPVDPDTKMTLGYCFIEFNTPQEAQNAKEKSHG----------YKLDKSHIF..........`	137
6	-5.720	`[J] KOG4708 Mitochondrial ribosomal protein MRP17`	`ali follow..`	13	29	`MPFYEVSMITRSLSKADLVKALTRAGNTLLDHGAVIEKVESLGHRDLPYKRLAKQTNEPVYASNFFLFKAHM--SREARQKTKSILTHDLDT.........................`	118
7	-5.570	`[A] KOG0146 RNA-binding protein ETR-3 (RRM superfamily)`	`ali follow..`	13	55	`....KLFIGQIPRNLDE------KDLKPLFEEFGKIYELTVLKDR---------------FTGMHKGCAFLTYCERESALKAQSALHADSEVGMLNKQQSEDDVRRLFEAFGNIEEC`	181
8	-5.430	`[S] COG3224 Uncharacterized protein conserved in bacteria`	`ali follow..`	9	14	`.YFEYHFAHRVTPDHHEIFLECQEQLKILVTKYGYISSESTELRS---------------EGDIFVAETVIRFDTLENFMGWIDSPERRQLIYLEENAGYQFEGKVNTEGYSRWLK.`	114
9	-5.390	`[S] COG4538 Uncharacterized conserved protein`	`ali follow..`	12	2	`.............................................................SLADIAQAQLDAYNAQDLDAHCVHFTDDVVVAGLNGDVARTGIEAYRAFYAKTFA.`	56
10	-5.300	`[A] KOG0144 RNA-binding protein CUGBP1/BRUNO (RRM superfamily)`	`ali follow..`	11	16	`...IKMFVGQVPRTWSE------KDLRELFEQYGAVYEINVLRDR-------------SQNPPQSKGCCFVTFYTRKAALEAQNALHNMK-IGMISKKCTENDIRVMFSSFGQIEEC`	137

FFAS is supported by the NIH grant R01-GM087218-01

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