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Query: [J] COG5593 Nucleic-acid-binding protein possibly involved in ribosomal biogenesis, from VFDB

Results of FFAS03 search in VFDB
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MATLYPKPKRGQKIIFNEEGEGTIDTKPQGVMFDPGVPWYNIPLPELHEDKKFVNVDHVSELETRGLLLLKEDSERFSETLGHGTADKRMLQTLISSGTTSDRISALTLLVQESPIHAVKALETLLSICSKKSRNEATQAITTLKDLFIGGLLPDRKLKYMKQQSCLGSKNVTDKHLMVWAFESFLKSFYFKYIQIIEALSFDALLFVKSQMVSTIYDLLKAKPEQEQNLLKLLINKLGDKENKIASKASYSILQLEASHPAMKLVITKEIERFIFAPSTSRTSCYYTLITLNQTVLTHKQVDVANLLIEIYFVFFTKLLFALEKEEVADAPTLEKKSLQSDSKNKKSQKRKKDEDLRKEAEENVNSRVISAVLTGVNRAYPFAEVNSEKFDKHMNTLFAITHTASFNTSVQVLMLIFQASASRDFISDRYYKSLYESLLDPRLTTSSKQSLYLNLLYKSLIIDNNIPRVRAFIKRMVQVSAWQQPPLVTGLFHVMHQLVIATTALRSMFTNAEIHDFDGDEEEVFKDVEEDDVSEDQKVDSDKDGKLSDKQSHSAYVVGNVSVSTKKEHLSYDGRKRDPQYSNADGSCLWEIHPFLNHFHPTVSLLAKSLVYGEKILGKPNLSLHTLNHFLDKFAYRNPKKSAAARGHSIMQPLAGGLSKGYVPGSTYSGVPMNSEQFTSKKQEEIPVDELFFYRFFNDKYIKGKQARKTKVDRDEEGEIDEDEVWKALVDSKPQLEMDEEESDFDSEEMDKAMTDMGSDSEQSADENDNESMASEEKPMFSDEENLSEIAHSEDEFDDTVDFFEDENDLLPFNETDDEEEIQTVDHSETHSHKKKKRKAIKDLPVFADAESYAHLLENLast
1 -163.000[J] COG5593 Nucleic-acid-binding protein possibly involved in ribosomal biogenesis  ali  100  1MATLYPKPKRGQKIIFNEEGEGTIDTKPQGVMFDPGVPWYNIPLPELHEDKKFVNVDHVSELETRGLLLLKEDSERFSETLGHGTADKRMLQTLISSGTTSDRISALTLLVQESPIHAVKALETLLSICSKKSRNEATQAITTLKDLFIGGLLPDRKLKYMKQQSCLGSKNVTDKHLMVWAFESFLKSFYFKYIQIIEALSFDALLFVKSQMVSTIYDLLKAKPEQEQNLLKLLINKLGDKENKIASKASYSILQLEASHPAMKLVITKEIERFIFAPSTSRTSCYYTLITLNQTVLTHKQVDVANLLIEIYFVFFTKLLFALEKEEVADAPTLEKKSLQSDSKNKKSQKRKKDEDLRKEAEENVNSRVISAVLTGVNRAYPFAEVNSEKFDKHMNTLFAITHTASFNTSVQVLMLIFQASASRDFISDRYYKSLYESLLDPRLTTSSKQSLYLNLLYKSLIIDNNIPRVRAFIKRMVQVSAWQQPPLVTGLFHVMHQLVIATTALRSMFTNAEIHDFDGDEEEVFKDVEEDDVSEDQKVDSDKDGKLSDKQSHSAYVVGNVSVSTKKEHLSYDGRKRDPQYSNADGSCLWEIHPFLNHFHPTVSLLAKSLVYGEKILGKPNLSLHTLNHFLDKFAYRNPKKSAAARGHSIMQPLAGGLSKGYVPGSTYSGVPMNSEQFTSKKQEEIPVDELFFYRFFNDKYIKGKQARKTKVDRDEEGEIDEDEVWKALVDSKPQLEMDEEESDFDSEEMDKAMTDMGSDSEQSADENDNESMASEEKPMFSDEENLSEIAHSEDEFDDTVDFFEDENDLLPFNETDDEEEIQTVDHSETHSHKKKKRKAIKDLPVFADAESYAHLLEN 860
2 -113.000[JK] KOG2038 CAATT-binding transcription factor/60S ribosomal subunit biogenesis protein  ali follow..  29  146.EPHSDENGSTTPKVKKDKQNIFEFFERQTLLLRPGGKWYDLEYSNEYSL-KPQPQDVVSKYKTLAQKLYQHEINLFKSKTNSKGASSTWMKAIVSSGTLGDRMAAMILLIQDDAVHTLQFVETLVNLVKKKSKQQCLMALDTFKELLITDLLDNRKLRIFSQRPFDKNKDSRDRRLILWYFEHQLKHLVAEFVQVLETLSHDTLVTTKTRALTVAHELLCNKPEEEKALLVQVVNKLGDPQNRIATKASHLLETLLCKHPNMKGVVSGEVERLLFRSNISSKAQYYAICFLNQMALSHEESELANKLITVYFCFFRTC----------------------------------------VKKKDVESKMLSALLTGVNRAYPYSQTGDDKVREQIDTLFKVLHIVNFNTSVQALMLLFQVMNSQQTISDRYYTALYRKMLDPGLMTCSKQAMFLNLVYKSLKADIVLRRVKAFVKGLLQVTCQQMPPFICGALYLVSEILKAKPGLRSQLDDHPESDDEENFIDANDDEDMEKFTDADKETEIPETDVETKKPEVASWVHFDNLKGGKQLNKYDPFSRNPLFCGAENTSLWELKKLSVHFHPSVALFAKTILQGNYIQYSGDLQDFTLMRFLDRFVYRNPKPHKGKENTDSVVMQ----PKRKHFIKDIRHLPVNSKEFLAKEESQIPVDEVFFHRYYKKVAVKEKQKRDADEESIEDVDDEEFEELIDTFEDDNCFSSGKDDMDFAGNVKKRTKGAKDNTLDEDSEGSDDELGNLDDDEVSLGSMDDEEFAEVDEDGGTFMDVLDDESESVPETKKSKRKGTDDFDFAGSFQGPRKKKRNLNDSSLFVSAEEFGHLLDE 988
3 -72.100[J] KOG2154 Predicted nucleolar protein involved in ribosome biogenesis  ali follow..  11  3..................................................................................................LLISEIKDIAKRLTAAGRKQYNSIIKLINELEDETEKNLRFLVMSLFQIFRK-LFSRGDLTLPSS---------KKSTLEKEQFVNWCRKVYEAFKTKLLAIISDIPFSLGLDSLDVYLQLAELESTHFKGAPFFPNKTFRKLIIALWSSNMGEIEDVKSSGASENLIIVEFTEKYYTKF---ADIQYYFQSEFNQLLEDPAYQDLLLKNVGKWLALVNHDKHCSSVDADL---EIFVPNPPQAIENESKFKSNFEKNWLSLLNGQLSLQQYKSILLILHKRIIPHFHTPTKLMDFLTDSYNLSNKNAGVVPILALNGLFELMKRFNLEYPNFYMKLYQIINPDLMHVKYRARFFRLMDVFLSSTHLSAHLVASFIKKLARLTLESPPSAIVTVIPFIYNLIRKHPNCMIMLHNPAFISNPFQTPDQVANLKTLKEN---------------------------------YVDPFDVHESDPELTHALDSSLWELASLMEHYHPNVATLAKIFAQPFKKLSMEDFLDWNYDSLLNAESSRKLKTLPTLEFEA.................................................................................................................................................................................................................. 525
4 -68.000[JU] KOG2153 Protein involved in the nuclear export of pre-ribosomes  ali follow..  13  132.ANAKRRLEKKRSGVESDSDDEDDVEKKKRKFAGLLEEGHEELLPIKLKDTREKEVKEDEEEKSGDEEEEGEEDEPHREDFSHLSASELIAKRRELMQEFKDTIASHANMLLSNPQVNIVRLRDLYNLCNGEKIHSLVLAIASTLQVL-LDILPGYAIREQTAE--EKAQKQKKETRNLVNYEESLLRYHLKYLQLCEKLSNKLVGKMGILSVKALARIVVSAPHFNTNIVSSLVRLSLAKNETVIREVCEAIRTVFKEHLKITLFTARSISTLVTKRKGRVPPELLRTLLSMNITEVKDEDKKSGKDALIAKKYQKKYKKQLARLEADLLEVEAEESMSKKLKNATEAMKFAFQSYFSILKRMPNSALLEPVLEGLSKFAHLLSIDIVSTMENMVQNENLKSLDQLHCINTVFVILSGDGQLLNIDPSKFYRLAYRVLNHLPFEKRPEQRKTLETMLVIRRKAVPLSRVAAFVKRLLSIATVLDDFPALCIVSLVRSLFIAHPKLSSMIEDEE----------------------------------------------------GGAPGIYRPDIDDPDVANALASDVRELSMLARRRNTELSRFANNILYGVPSTGIFKLNP-QLSSLKPWILMGQLMDNAKDAYDKVESKYLDDLEKKRNQSVTPKNINFHISNWLAASK................................................................................................................................................................................ 812
5 -64.700[JU] COG5117 Protein involved in the nuclear export of pre-ribosomes  ali follow..  11  47.KGSSWDEEEQDYEMVPRKNRSDTSNLVEGLPIKVNGKVER--------KLHKAQEKPKDDDEEDEDSNDSSEDDEGPNEEQEAEAKEDEPDTEEKILQLKEDIADLVTKVMEEPEENTAALGRLCKMVESKNPNTCKFSMLALVPVFKS-IIPGYRIRPLTETE--KKEKVSKEVSKLRNFEQALVYNYKNYVGRLQSLSKTPSNSLGILATQAAKELISTASHFNTDIFTLLLRRICKPRISTSIQIIQTFETLLNEDESISFEILRIFNKILKTRNFNIEESVLNMLLSLDVLHDYDPNTKLKKDRVHLSKKQRKARKEMQQIEEEMRNAEQAVSAEERERNQSEILKIVFTIYLNILK-NNAKTLIGSVLEGLTKFGNM--ANFDLLGDFLEVMKELISSAEVRKALLCIVSAFSLISNTQVDLSKFVDGLYALLIKPSVNVSTKAELLLKALDHVFSKSGTKERATAFTKRLYMCISHTPEKTSIAILKFIDKLMNRYPEISGLYSSED----------------------------------------------------RIGNGHFIMEADNPSRSNPEAATLWDNALLEKHYCPVVTKGLRSLSSRSKECSK................................................................................................................................................................................................................................................ 663
6 -14.900[U] COG5240 Vesicle coat complex COPI, gamma subunit  ali follow..  2................................................SYSKKDDDGDESIFANVNQVTVTQDARAFNSSSISPRKSRRLLSKIAYLIYTGEHFQE-ITKLFQHKDPSLRQFVYIIKELSVVAEDVIMITSSIMKD---ETIYRPNAIRSLIR-----------------------ANTVPAIERILTTGIVDPISAVASAALVSAYHLYPVAKDIVSRWNNEVQDAVTSHNVGRKVASSPFFTSTLGYTPNASGISQYHALGLLYRIRRHDSIAMNKLLQLLVSNLGTVSNSHAFVMLIRYISSL------------------------------MDQNTQFRDQMVPFLHGWLKSKGDMVNLEVARNMVRLKNISDDDLQPVVSVLKIFLSSHRSATRFSAIRTLNELAMTRPHLVHSCNLNIESLITDVN---RSIATYAITTLLKTGNDES----VDRLMKQIVTFMSDISDNFKIIVVDAIRSLCLKFPR................................................................................................................................................................................................................................................................................................................................................................... 412
7 -14.600[U] COG5096 Vesicle coat complex, various subunits  ali follow..  11  4..........................................................................WTLVQQDFLEAPSVDALKTSLESKNDYVKISAMKTILDSLPSILMHVIRFVMPSRNKELKK--------LLYYYWEVCPKYNN-------------------------DGTMKQEMILACNSFRNDLQHPNEFIRGATLRFLCKL--KEPELLDPLIPTVRQCLEHRHAYVRKNAILAVFSIYQVSNHLIPDAASLAEDFLAAES-EGTCKRNALIVLFTIQIPSLNASSLLVIIEFIRKVVLTKADGLEKLRFQSLLVSLTATNNSSVFPDAESLKLAASRLLALADREADNNAKLIMLDRISQLA---ARDKSILEDLITDVIPFLSSSDFDVCEKAISIIMGLVSSRNV--EDILNHFQKELTKSN--ETEKDDGRRRALTKAIHAINFPHTAATAIQYLLSHISDFQSKSASSVLSFIKEVMEKFPDLRSSN.............................................................................................................................................................................................................................................................................................................................................................. 430
8 -14.500[U] KOG1058 Vesicle coat complex COPI, beta subunit  ali follow..  1..........................................................MSSGEQPCYTLIHVPSDAELPSEAQ-------LKEKFEKGGDKERIEALKKLINGEKTSQSMLMYVIRFCLPSNE-----HTLKKVLLIFWECVPKTDS-------------------------NGKLLHEMILVCDAYRKDLQHPNEFVRGSTLRFLCKL--REPELLEPLMPAIRACLEHRHSYVRRNAVCAIFTIYKNFEFLIPDAPELVTEYLEQEQ-DASCKRNAFMMLLHVQVGSFGDILQLVIVELIYKVCHNNPNEASRFIRCVYNLLQSSSPA-TLSNVPAAVKAAASAYIDLIVKESDNNVKLIVLDRLVA-LRGSSSNEKILQGLVMDILRVLSSPGLEVRKKTLSLALDLVSSRNV--EDMVMFLKKEINKTATESNDENGKYRQELVKTLHTIKFPDVASTIVPVLMEFLSDTNEKASSYVLQFVREAVHKLPNLKNAI.............................................................................................................................................................................................................................................................................................................................................................. 438
9 -13.900[U] KOG1078 Vesicle coat complex COPI, gamma subunit  ali follow..  1.........................................MAQPLVKKDDDHDDELEYSPFMGIEKGAVLQEARVFNDPQVDPRRCSQVITKLLYLLNQGESFTKVETKLFQSKDTGLRRMVYLIIKELSPSSDEVIIVTSSLMK---IDMYRANAIRVLCR-----------------------GTLLTQIERYLKQAIVDKNPVVSSAALVSGLHLLKTNPEIVKRWSNEVQEGIQSRSALVQFHALALLHQIRQNDRLAVSKLVGSLTRG------SVRSPLAQCLLIQRPFYEFLESCLRHKAEMVILEAARAITELDGVTSRELTPAITV---------------------LQLFLSSPRPVLRFAAVRTLNKVA---MTHPMAVTNCNIDMESLISDQNRSIATLAITTLLKTGNESSVIADEFKIVVVDAIRSLCVKFPLKYRSLMTFLSNILREEGGFEYKRAIVDSIVTI-IRDIPDAKESGLLHLCEFIED...................................................................................................................................................................................................................................................................................................................................................................... 433
10 -13.400[DZ] KOG2229 Protein required for actin cytoskeleton organization and cell cycle progression  ali follow..  10  1..........................................................................................MGRRSRAAMLPTNIILLQNLVKRDPLQQYAHYESLRDIFMLNGLAGGDSAAATNG--LDVGNGSSTMAGTNGTTMSTSTSQLIELVGFVSQVCSCFPRETANFPSELKQLLLEHHKSLPEELIQSLFPLLVHAKELRKIIYTNLISLL-GKNQKLNKSTQAVCFNLLDQPDSQGIWATKLTRELWRRGIWDDSRTVEIMT--------HQDVKIVMSGVMFFLDADREREENFEENSEDEDGFDLDALRHKMQVNKKTGRRGKKLENAIKTVKKKKKNGPGAPQGYLNFSAIHLLRDPQGFAEKLFKEHLSGKTKNMEQKISLMQLLSRLIGTHKLIVLGIYTFFLKYL------KQRDVTRIMSACAQACHDLVPPEVINVMVRKIADVSDGVANEVAAAGINTIREICSRAPLA------------------------------------------------------------------------------IDEILLQDLVEYKGSKAKGVNMAAKSLIA-------------LYRDVAPEMLKKKDRGKNAAMEVQEAKKGGKDSKRPQFGADNSVQGIAGIELLAKWKKEH------------GEESENEDADANWEVDVDSEEDDVDGEWVTMDSDKEYDVDMEDSDDEKDNAKGKESDSDLELSDDDDEKEVKDEQEDADIDPEAAFREIASTRILTPADFAKLQELRNEESVAKIMGIHKQDKREELVDASTLTGPIKYKQSREERLQKVLEGRE....... 702
11 -13.200[R] KOG4264 Nucleo-cytoplasmic protein MLN51  ali follow..  12  1..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................MADRRRQRASQDTEDEESGASGSDSGGSPLRGGGSCSGSAGGGGSGSLPSQRGGRTGALHLRRVESGGAKSAEESECESEDGIEGDAVLSDYESAEDSEGEEGEYSEEENSKVELKSEANDAVNSSTKEEKGEEKPDTKSTVTGERQSGDGQESTEPVENKVGKKGPKHLDDDEDRKNPA---EHDLRGQTQEEEVRPKGRQRKLWKDEGRDKFREDEQ-QELIA. 238
12 -13.100[U] KOG1062 Vesicle coat complex AP-1, gamma subunit  ali follow..  20...........................................................CKTAAEERAVVRKECADIRALINEDDPHDR-LKLIASPGFPEKRIGYLGLMLLLDERQEVLMLNSLKQDLNHSNQYVVGLALCALGNICSAEMARD-------------------------------------LAPEVERLIQFRDPNIRKKAALCSTRIIRKVPDLAENFVNAAASLLKEKHHGVLITGVQLCYELCTINDEALEYFRTKCTEGL--------IKTLRDITNSAYQPEYDVAGITDPFLHIRLLRLLRVLGQGDADASDLMTDILAQVATKTESNKNAGNAVLYECVETIMAIEDTNSLRVLAINILGRFL-AITFDDQAVQRHRVTILECVKDPDASIRKRALELVTLLVNENNV--TQLTKELIDYLEISDEDFKEDLSAKICFIVEKFSPEKL------YIDQMLKVLCEAGKFVKDDVWHALIVVISNASELH................................................................................................................................................................................................................................................................................................................................................................. 456
13 -13.000[R] KOG2295 C2H2 Zn-finger protein  ali follow..  168..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................NISDSEVMRKYTEYKTD-EFFVAHKDEEW----FKNKYHPEDSVKRSEEQRGFLQRRTDVFMELLENGTIGSVKVDSSQADALIRVLDTCVIKLEGGTDEDLKVLDEKPKDPVVYERKAEQMQSVKEVEKTINSPKEEMSEADPVSTQRKPVRPVNSDGENWDDDDAENSAPKKELAEDSKDSDSKPEDKQLNKKKTKKRKRNSSDDDSSSSESSSSSDEEKLKEKYDVEDGLRAEQKTEAEKDRQEATKAKQGPQSPKLDEDEGNENTEPKGLDSKINTYEEIDNTLKSP....... 460
14 -12.800[K] KOG2478 Putative RNA polymerase II regulator  ali follow..  10  377..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................EEEEEEEMETEEKEAGGSDEEQEKGSSSEKEGSEDEHSGSESEREEGDRDEASDKSGSGEDESSEDEARAARDKEEIFGSDADSEDDADSDDEDRGQAQGGSDNDSDSGSNGGGQRSRSHSRSASPFPSGSEHSAQEDGSEAAASDSSEADSDSD....... 531
15 -12.700[U] KOG1061 Vesicle coat complex AP-1/AP-2/AP-4, beta subunit  ali follow..  10  2................................................TDSKYFTTNKKGEIFELKAELNNEKKEKRKEAVKKSSLFPDVVNCMQTDNLELKKLVYLMNYAKSQPDMAIMAVNSFVKDCEDPNPLIRALAVRTMGCIRVDKITE-------------------------------------YLCEPLRKCLKDEDPYVRKTAAVCVAKLHDINAQEDQGFLDSLRDLIADSNPMVVANAVAALSEISESHPNSNLLDL-FILDCLSNYNPKDDREAQSICERVTPRLSHANSAVVLSAVKVLMKFLELLPKDSDYY--------------------NMLLKKLAPPLVTLLSGEPEVQYV--ALRNINLIV---QKRPEILKQEIKVFF-VKYNDPIYVKLEKLDIMIRLASQANI--AQVLAELKEYATEVDVDFVRKAVRAIGRCAIKVEQSAE------CVSTLLDLIQTKVNYVVQEAIVVIRDIFRKYPNKYESI.............................................................................................................................................................................................................................................................................................................................................................. 428
16 -12.500[O] COG5021 Ubiquitin-protein ligase  ali follow..  10 1137.............................................................TVPIKVMALAMILDLDKSDSLFKTQSRNVPYSVFKQTNVNIYTKELYELHWDLIFPPIKKISLFEQVIPGDVAANYLTDTGDDLPADNSIGLFSPEQWEKYKKLIGEDKSIYYPQPMQAQYYK---------GCSSKELDELRDTFFNDGLPSRIFTVLPFYPK--AKTLLQIFTKYDEPTEVFAGRILDRILETDLDDPATLSSLIHLFGIFLNEKYIYQKASHLMQRFIEYLEKSLKPEHVNTPWFSKALYVYEIILAKSELPHLEELSKDVLLRYPLLSMAKDPMKQKLFDILIRVSDISNFYSALATILIFYSRDELYANN-----SGILSRLLKVIGSFQKLDKINFLESSFLLLTRRCFETTENVDALIRALEEKAHVVMRSPSQFIDVLCETAREKSDIYERTGIMHLLLSQLMAASEKYMIFLLKLLVELVSSYNQCKFEFLTFSRRNTYAERPRPRTTAINDKPVGTDHDKHEAKRREVIGMLARSVIIGFLATVQDDRTTKTDVKLADP-----------HMNFIRKFAIEAIIKAIRNATSSSKLLESNHLKLDMWFRIITSMVYVQAPYLRQLLDSNKVEADQYQLCKLVIDLGLPSVITMASIDLNYPFSKKIFNVAVEALNTISSTRNNFSEHFKIEDHDEVEDEVDESDKEEIPDMFKNSALGMYDVEDIEEDDDDDTSLIGDDDAMAFVDSDNGFEVVFSDEDDDMGEEDADDARSDSEENELSSEMQSSTADGTDVDYEVDDADGLIINIDQPSG........................... 1999
17 -12.400[BD] COG5098 Chromosome condensation complex Condensin, subunit D2  ali follow..  242.........................................................TNLTYFLHLSVFNAELLKLLNDEYNYPQLTEDILKEISTRVFNAKDTTGLIKLSELSPGIMLRQMNLVITLLNNSSITLRCSVVEACGNIVAELAQDPQT-------------------------MEHYKQQIAVLIELLEERFQDSNPYVRTKAIQGCSKICDLSSKSKAKFTSLAVRSLQDRSSLVRRNSVKLLSKLLLKHPFKAIHGSQLRLSEWEEYLKGSESQLNSTLKKVESQETLNDTIE----------------RSLIEEEVEQDEGQCRTELEGSFNKSAELSRIENEVENINATNTSVLMKLKLMIVYYKDAISFI----KEIHKSIELISNLLFSKNRNEVLESMDFLVLADAFDIELSEFGIKKMLHLVWMKGTNDEGTSISYKQLFLTAPDSCNMQEKAAHIAKNLINLSIGASIADLASLEQLLGMMYEQKLIDQHVIN............................................................................................................................................................................................................................................................................................................................................................. 666
18 -12.400[YU] KOG2023 Nuclear transport receptor Karyopherin-beta2/Transportin (importin beta superfamily)  ali follow..  17LQHAHSTDRDVQRNVQVQLVQLNEHQKFCCYLVY----------------LSDMKEMIDATSRSLAGLLLKNNIRAKWNKYPQDVKFTTCLKSIGDRATVGIIVTTIVMEENMCDWPDL--LDTLATVLMQPDELMQEGALGALQKVFLRPIMPKLLVFYEHHAAKMRALAMNCVNCILMVNNDPIDFAIDQFLTSLFARHNDNDEEVQKQLCRSLTLLLDTHIEK-PNVIEYIIKKTQDHNESIALEACEFWLSIAENSDICRTMVLPHLDKLIPVLLGSMRYSETDPALKANDEDSSVPDREEDIKPRFHKSKQHGLGGLVESDDEEDEDDDDDGGGDWNI-------RRCSAASLDVLASIFGKDLLDKLFPLLKDTLMNDNWLVPHLGELIPFMLAMMFDKKPLVRSITCWTLSRYSSFRQQFFKDVLANLLRCSLDGNKKVQEAACSAFATLEEEAGEQLIP-FLGEILDQLVKAFQCYQAKNLLILYDAIGTLANS...................................................................................................................................................................................................................................................................................................................................................................... 543
19 -12.300[S] KOG1949 Uncharacterized conserved protein  ali follow..  10  91......................................................RSPVHSKVREVLSYFHHQKKVRQGVEEMLYRLYKPILWRGLKARNSEVRSNAALLFVEAFPIRD-KQFEELYSLLEDPYPMVRSTGILGVCKITSKEMMPPTILIDLLKKVTGELAFDTSSADVRCSVFKCLPPLLEQLLPALRYSLHDNSEKVRVAFVDMLLKIVRAAKFWKICPMEHILVRLETDSRPVSRRLVSLIFNSFLPVNQPEEVWCERCVTLVQMNHA-------AARRFYQYAHEHTACTNIAKLIHVIRHCLNACIQRAVREPPEDEEEEDGREKENVTVLDKTLSVNDVACMAGLL--EIIVILWKSIDRSMENNKEAKLYTINKFASVLPEYLKVFKDDRCKIPLFMLGVISTLRSREEGAVDKSYCTLLDCLCS------GQVGHILELVDNWLPTEHAQAKSNTASKGRVQIHDTRPVKPELA-LVYIEYLLTHPKNRECLLSA............................................................................................................................................................................................................................................................................................................................................................ 572
20 -12.000[R] KOG4334 Uncharacterized conserved protein, contains double-stranded RNA-binding motif and WW domain  ali follow..  1.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................MEQESGGKKSNEQLLSEREAIMRQLAMLGSGPEDLDVDDEEEDEEEEVEKMEEGVEETMENASVVKETTPVKDENIVEDSNSSEELFPYLDSPPEDKIQEISANDTEIDQIDSPIRFEGVKNPAQKMDVDGEEGTSTDARPVSGSSGSSVGEQIRAPVPVLK................... 162
21 -11.900[U] COG5215 Karyopherin (importin) beta  ali follow..  2.................................................STAEFAQLLENSILSPDQNIRLTSETQLKKLSNDNFLQ-GLSSQVLIDENTKLEGRILAALTLKNELVSKDS-TNALTALVSIEPRIANAAAQLIAAIADIELPHGAELMKIMVDNTGAEQPENVKRASLLALDPQSQALVSSSNNILIAIVTETSKAVRLAALNALADSLIEREGERNYLMQVVCEATQAEDIEVQAAAFGCLCKIMSLYYTMKPYMEQALYALTIMKSPNDKVASMTVEFWSTICEEEIDIAYELAQFPQSPLQSYNFALSSIKDVVPNLLNLLTRQNEDPEDDDWNVSMSAGAC-LQLFAQNCGNHILEPVLEFVEQNITADNWRTYYVHQALPSILNLMNDQSLQVKETTAWCIGRIADDPQQHLPGVVQACLIGLQDHPKVATNCSWTIINLVEQLAEASPIYNFYPALVDGLIGAANRIDNEFNASAFSALTTMVEYAETSASISTFVMDKLGQTMSVDENQLTLEDAQSLQELQSNILTVLAAVIRKSPSSVEPVADMLMGLFFRLLEKKDSAFIEDDVFYAISALAASLGKGFEKYLETFSPYLLK....................................................................................................................................................................................................................................................... 646
22 -11.800[A] COG5181 U2 snRNP spliceosome subunit  ali follow..  10  643...................................................PEYASHFTRRIMKILLREFNSPDEEMKKIVLKVVSQCASTDGVTPEYLRTDVLPEFFHCFWSRQVGSRQIVERVVNNFKDESEPYRKMTAETVDKV-LEELLLDGVLFAFQEQSVEEKVILTCFSTVVNALGTRCKPYLPQIVSTILYRLNNKSANVREQAADLVSSITIVLKACGRKLGVVLYEYLGEEYPEVLGSILGAIKAIVSV-SSMQPPIRDLLPRLTPIRNRHEKVQENTIDLVGKIADRGSEYVSAREWMRICFELIDMLKAHK-----------------------KSIRRAAVNTFGYISKAIGPQDVLATLLNNLKVVAIAIVAETCMPFTVVPALMADYRTPEMNVQNGVLKSLAFMFEYIGEQARDYVYAITPLLADRDAVHRQTAASVIKHLSLGCVGLGVEDAMIHLLNILWPNILEESPHVINAVREGIDGIRN....................................................................................................................................................................................................................................................................................................................................................................... 1123
23 -11.700[KB] COG5137 Histone chaperone involved in gene silencing  ali follow..  13  112........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................YYVNNEMEGLNLQEMDDAEIKKVKVDISKVWRSILAEKPRVTRFNIQWDNPDFDDAPPVQPDADEEEEEEEADEMEEEFDEEGEGDEEEEEEDDGDGDGEGDGDGEGENDGKGSEEEEEEEIDIEEEEEESALANASAAEEKPEEKPETS.............. 261
24 -11.700[U] KOG1077 Vesicle coat complex AP-2, alpha subunit  ali follow..  10  13...............................................NCKSKEAEVKRINKELANIRSKFKGDKTLDGYQKKKYVCKLLFIFNLLSSNKYSEK--FISVLVNTNSDLIRLIIQSIKNDLQSRNPVHVNLALQCIANIGSRDMAES------------------------------FSNEIPKLLV-----SGDTMDVVKQSAALCLLRLFRSSPDPGGEWTSRIIHLLNDQHMGVVTAATSLIDALVKRNPDCVNLAVSRLSRIVTASYTDLQLSVKLLRLLQNYNPVTEEAGVRARLNETLETILNKAQEPPKSKKVQHSNAKNA--NLIIHSDSEPNLLVRACNQLGQFLSNRETNLRYLALESMCHLATSEFSHEEVKKHQEVVILSMKMEKDVSVRQMAVDLLYAMCDRGNA--EEIVQEMLNYLETADYSIREEMVLKVAILAEKYATDYT------YVDVILNLIRIAGDYVSEEVWYRVIQIVINREEVQ................................................................................................................................................................................................................................................................................................................................................................. 468
25 -11.200[K] COG3343 DNA-directed RNA polymerase, delta subunit  ali follow..  16  62............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TDLNTDGSFIP---ENKWGLRSWYAIDEIDEEIITLEEDEDGAQKRKKKRVNAFMDGDEDAIDYRDDDPEDEDFTEESAEVEYDEEDPDDEKSEVESYDSELNEIIPEDDFEEVDINEEDEEDEEDEEP............................................... 189
26 -11.100[U] COG5064 Karyopherin (importin) alpha  ali follow..  1..............................................MESRYLSDRRSRFKSKGVFKADELRRQREEQQIEIRKQKREESLNKR-RNLNAVLQNDIDVEEEADQSQVQMEDEFPKLTADVMSDDIELQLGAVTKFRKY------------------LSKETHPPIDQVIA-----------CGVVDRFVQFLESEHHLLQFEAAWALTNIASGTTDQDSGAVPRFIQLLSSPEKDVREQVVWALGNIAGDSSACRDYVLGNLLNILQSSASDVSMLRNATWTLSNLCRGKNPPPNWSTISVAVPILAKLLYSEDVEIIVDACWAISYLSDGPNEKIGAILDVGCAPRLVELLSSP-SVNIQTPALRSVGNIVTGTDAQTQIIIDCLNAFPSLLSHQKENIRKEACWTISNITAGNTQQIQAIIESLVHLLSYADYKTKKEACWAISNATSGGLGQPDQIRYQGVIKPLCDMLNGSDNKIIQVALDAIENILK....................................................................................................................................................................................................................................................................................................................................................................... 448
27 -11.000[S] COG4530 Uncharacterized protein conserved in bacteria  ali follow..  15  49..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................VLEKEEEEDVKEVDTENTEVELVSLEEADDEASGGDDLPDLGDDDVEIEGDDDDTFLQTDDEDDDDDMSDIIGVSDEDDD.................................................. 128
28 -10.900[S] COG5369 Uncharacterized conserved protein  ali follow..  12  23......................................................EHELLRYIVPFKNWVIGRPDR---KEYAIRNGAPKLLLNLFSLENLSMNEKYQVFVVLNSQFLRHEDLLSVMQMISKRDSTPYGMLNITLKVFNTMLSFDK-PLKEQPSLDVLRISNLSSKILHRLILYNSKVGDSPRFCSALTRLESNGHVSPRDMDLDEIENVFEGNKDNGDEYITQLFCLVRQFDPCIRLLSISCLVTLYKSKNQTKEIQMIVTPILIRLFFESREAKQIAPRILAIIINENEIMQKTAVNAGFIDAAKYLLEYATKEEENEINFLSDELQSSAACECLLSLSRSVYILRTGLADADVSEPLIKLLTSAICNLVLKFSPLREKFLTTIDTLISNISTKDSSLRKKTVWVLRHVVFGDDETIQL-ASKLVELCNDEDLGVQEQMLQVLRNF--TCQKEESVDFLLLLAKILLEKLESKNPILIEPSIYILVHIAASDGELRDSI.............................................................................................................................................................................................................................................................................................................................................................. 595
29 -10.900[R] KOG1293 Proteins containing armadillo/beta-catenin-like repeat  ali follow..  12  23......................................................EHELLRYIVPFKNWVIGRPDR---KEYAIRNGAPKLLLNLFSLENLSMNEKYQVFVVLNSQFLRHEDLLSVMQMISKRDSTPYGMLNITLKVFNTMLSFDK-PLKEQPSLDVLRISNLSSKILHRLILYNSKVGDSPRFCSALTRLESNGHVSPRDMDLDEIENVFEGNKDNGDEYITQLFCLVRQFDPCIRLLSISCLVTLYKSKNQTKEIQMIVTPILIRLFFESREAKQIAPRILAIIINENEIMQKTAVNAGFIDAAKYLLEYATKEEENEINFLSDELQSSAACECLLSLSRSVYILRTGLADADVSEPLIKLLTSAICNLVLKFSPLREKFLTTIDTLISNISTKDSSLRKKTVWVLRHVVFGDDETIQL-ASKLVELCNDEDLGVQEQMLQVLRNF--TCQKEESVDFLLLLAKILLEKLESKNPILIEPSIYILVHIAASDGELRDSI.............................................................................................................................................................................................................................................................................................................................................................. 595
30 -10.800[K] COG5164 Transcription elongation factor  ali follow..  12  1.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................MSDNSDTNVSMQDHDQQFADPVVVPQSTD------KDENTSDKDTVDSGNVTTTESTERAESTSNIPPLDGEEKEAKSEPQQPEDNAETAATEQVSSSNGPATDDAQATLNTDSSEANEIVKKEEGSDERKRPREEDTKNSDGDTKDEGDNKDEDDDEDDDDDDDDEDDDDEAPTKRRRQERNRFLDIE--AEVSDD 190
31 -10.700[K] KOG4501 Transcription coactivator complex, P100 component  ali follow..  1....................................................................MLDNDTSNNNNCNPQNLPLDELKFALSGKDGVRRNVPALDEHWVQREKPFASYLCMLSSYGRLKSGNNFRGDMEFLLSLFWSYMVYDESAMAAVVTFLQRANPYYRQTDV--QAHLLYGQLLDLVVRLIMRLCTGKESDSEWISPKQHGSLLYSNYLISVPLLFDLLIAVGDAEPENVELLRQIFDKVLEVQPEYQKDLKEALIFYE----------------------------------SAFLSMQIQVENEGCEGAGG------------------------------------GASLDVDLETPYDDVVLFAMDCAYTLRLLLLLCPQLLETIEQLRLAPSIANFY----------DMTVPMLYKNIYLVNPGANETRQQYIFIVRRVVSLQMESGRGQQLVEVMQECLSAQN------FVVDYQRQFPLEHDMKLLIQRCPNIKNYEVDFVVSGYQKALASCPNGIMADDMASNGVQVTGNVQDEEFKNGDSSRTSPQPSPTANGTTRDIDLEVTAVLEVRRLLIRYD-NSEQVIAAILDDNLPPDLAQ---------MDRQEVYIPPDPQDKQQRQTGLRHFNVHDGDRYDVLTRDQPECIIKQGKGLPGAPRNAEQLLDDKRDLKQLKERYQKYAMVEETTLERGEYDDEYDDSYEAQNEGQAPPVSLLRGRLQEAASSSAYNAQDELENDDEESSGGHSDPEPSMRTNRDFCENPEVIRARYEQRQLSKYGQKSGGHGASPSVVGAPKGQGQSQQTQRSRGQKEAHKST............... 715
32 -10.700[J] KOG0650 WD40 repeat nucleolar protein Bop1, involved in ribosome biogenesis  ali follow..  11  10..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................RGKDSEPTNEVVASSEASENEEEEEDLLQAVKDPGEDSTDDEGIDQEYHSDSSEELQFESDEEGNYLGRKQSSSAEEDEESSDEEDNEEEESTDGEEVEDEEKDSKSKQTDDKPSGSGAASKDSSKPEYQDSDTSDEEDIRNTVGNIPM---YDEYKHI... 177
33 -10.600[K] KOG2434 RNA polymerase I transcription factor  ali follow..  8.............................................................................TRLPGDAAASSSAVKKLGASRTGISNMRALENDFFNSPPRKTVRFGGTVTEVLLKYKKGETNDFELLKNQL--------------LDPDIKDDQIINWLLEFRSSIMYLTKDFEQLISIILRL--NRSQTVVEEYLAFLGNLVSAQTVFLRPCLSMIASHF-DNLPANFDTCHRALQIIARYVPSTPWFLMPILVEKF--PFVRKSERTLECYVHNLLRISVYFPTLRHEILELIIEKLLKLDVNASRQGIEDAEETATQTCGGTDSTEGLFNMDEDEETEHETKAGPERLLMSLVLSYMKDVCYVDGKVDDLYRDLINIFDKLLLPTHASCHVQFF--MFYLCSFKLGFAEAFLEHLWKKLQDPSNPAIIRQA--------------AGNYIGSFLAR----AKFIPLITVKSCLDLLVNWLHIY------------------------------------------NNQDSGTKAFCDVALHGPFYSACQAVFY-SGNLKEGLQYLQSLNFERI--VMSQLNPSVVNFFAAITNKYQLVFCYTIIERNNRQMLPVIRSTAGGDSVQICTNPL-------------------------DTFFPFDPCVLKRSKKFIDPIYQVWEDMSAEELQEFKKPMKKDIVEDEDDDFLKGEVPQNDTV......................................................................................................................... 619
34 -10.600[S] KOG4852 Uncharacterized conserved protein  ali follow..  11  109........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................DGGGAAAGSSDDVVYDYYAIHEKRGNPEVVGNLEQDIEGADFRFAKRDELDLGDEDDSDGPPADDEDDSNDEDNWRNDYPDEESYDEDSDNGDPYGISEPDHWHAGEEAYSDESFHRRLQNMDLNDERYEAFYEGDETDEDAD..................................... 251
35 -10.500[U] KOG4224 Armadillo repeat protein VAC8 required for vacuole fusion, inheritance and cytosol-to-vacuole protein targeting  ali follow..  10  9...............................................EKSKDEQYEPLLADREREAVADLLSFLEDRNEVNFYSEEPLRALTILAYSDNLDLQRSAALAF-KDVREVDRETIEPVLFLLQSPDAEIQRAASVALGNL-KALVVKLNGLDLLIRQMMSPHVEVQCNAVGCIT-ENKSKIAHSGALGPLTRLAKSKDIRVQRNATGALLNMTHSYENRSAGTIPVLVSLLPSSDTDVQYYCTTSISNIAVDAVHRKRLAVRSLIQLMDTSSPKVQCQAALALRNLASDERYQIEIVQSNALPSLLRLLRSSYLPLILASVACIRNISIHPLNESPIIDAGFLRPL----VDLLSCTENEEIQCHAVSTLRNLAASSERNKRAIIE-IQKLRCLILDAPVSVQSEMTACLAVLALSDELLNFGICNVLIPLTDSMSIEVQGNSAAALGNLSSNVDDYSRFIECGGIHGYLVRFLSSEDSTFAHIAAWTIVQLLE....................................................................................................................................................................................................................................................................................................................................................................... 493
36 -10.400[KB] KOG3265 Histone chaperone involved in gene silencing  ali follow..  12  179..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................DDCSGNYKTCINNSSDSFVENLSRKIETEDLRVTTFPIRWTDEDPVAEPVDEEANKVFDEDDLMPLHDDGQDDDEEEEDDDETGPNTEEVDLNESFNERMANAHDGTEQKNGEESMEHDGASGDVEMGDNQLFVQINTDTKATESMVDPLSDTTK....... 333
37 -10.300[S] KOG2149 Uncharacterized conserved protein  ali follow..  1..........................................................MSRSKAPARK--QKKGIDFKKIKRKLGRKLPPPNNATNTEIKSKAIILHEQSVAAERDGFATSLLELKNRTGHPNAKVRKDALHGIKDLLKH-------------------------------HPAELLSNKYATTHKLRELITDDDKLVRDDFYTLLTGIFLACKEDISSLMPYIFTAMTKSSIEVRLMAFKFFRLVLEFYSPT---ILENYKDVIHNNHFYIQDKKKLKVVLLGLADFAHVSGILKEIVAVLINCFQDFLPLIHASQRINKESFDCIRHKFSIRRHTQRHTKWLPSPEENTLMILDRDIASMLSKKLLGSFPLNHENNNRFLEFIENALLGKITRSNSLDKTLLALLPFVPKLLLRVDRDRRDNLMQAFTI---PESSLKLACISVVKDLINDPTVNNYQRAWVNKLPSLLNQKHHVSTKVVLQLLLDLARVGCL................................................................................................................................................................................................................................................................................................................................................................... 519
38 -10.300[S] COG5604 Uncharacterized conserved protein  ali follow..  10..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ARKANALAKKNDKIKKKDTDKGIRQKHSKKEGKDETLKRDVEKFIQNVNSEDTPSEDDSMSMDAFLEGGFEELDSANSNDAGSSRKRKNLPNENTQDSTSESSEEEEDGLESYQKQLEGLKEKDPEFYKFLEQNDQDLLEFNAAETDAMAKEIDENERLKSSSGKIVLTS----DTIQQWQKLLET 191
39 -10.300[J] KOG2256 Predicted protein involved in nuclear export of pre-ribosomes  ali follow..  10..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ARKANALAKKNDKIKKKDTDKGIRQKHSKKEGKDETLKRDVEKFIQNVNSEDTPSEDDSMSMDAFLEGGFEELDSANSNDAGSSRKRKNLPNENTQDSTSESSEEEEDGLESYQKQLEGLKEKDPEFYKFLEQNDQDLLEFNAAETDAMAKEIDENERLKSSSGKIVLTS----DTIQQWQKLLET 191
40 -10.200[YU] KOG1241 Karyopherin (importin) beta 1  ali follow..  1.....................................................MTSDIAMQLIAILEKTVSPDKNELLSAKNFLEQAAAALSEILVNTANSAVARMAAGLQLKNHLTS-ELIKNNILAALGTENTRPSCAAQCVAYVAVIELPINR-IQTLVNKVVSEGSSEMHRESALEAIFGVMENQSNDVLTAIIHGMVEPSNHVRLAATTALHNSLEEKDMERNFIMEVVCEATQCQDSQICVAALQCLVKIMTLYYQY---MEPYMAQALF--------------PITLAAMKSDNDAVALQGIEFWSNVCDEEIDLAIESQEATDQGRAPTKQDECDDEDTWSPAKAASVCLMVLATCCEDEIVPHVLPFIKENI---------------------ESPNWRFRDAAVMTFGSVLNGLETNTEQAMPTLIRLMYDSSVIVRDTIAWTFGRICDIIPEAAINETYLQTLLECFVKSLKSEPRVAANVCWAFIGLSDA...................................................................................................................................................................................................................................................................................................................................................................... 486
41 -10.100[O] KOG4413 26S proteasome regulatory complex, subunit PSMD5  ali follow..  1.............................................................................................MEDVNQLFDAAFEFAHYPGAQNETSVKELPVIFNALQTDPDIPGFELVTCLERLFKTK-----------------------------------ASLIPQYMPVLQVGLKADSAVVKSLACKTVLCLLEDCDTNNNGIYPLLLDYIINSDDEVANAASETIKSLARFPDAMSVIFPSETNDPTH-ARCSSLARVRVLSLIVKLFSISRLVASEVKKSGLLDLLEAEMKGTKDTLVILNVLELYYELMEVEHSSEFVPQTSLIQLLCSIISGTSTGPYEKLRAMMISGRLLSKENIYKVLISAIDGSLESVEMNDTDAQEAAIDALGQMGSTTK---------------GADLVLSTSPPAARHVVASAFDRNAHGKQLAALPSGLFLSVLQQSSEIRLAGYRTLTALVARPWCLVEILAKEE---------NIVTDATTETAKIAMEARYNCCKAIHEAFLCSNFVDDPRRLKTGDKLQEA---RSGPYMSKKHRGARPEV-MTGEGF.................................................................................................................................................................................................................................................................... 519
42 -10.000[A] KOG4849 mRNA cleavage factor I subunit/CPSF subunit  ali follow..  457............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TVSSSAIARAVSDAAAGEYSSAIETLVTAISLIKQSKVAHDERCKILISSLQDTLHGIEAKSYNRRERSRSRERSHRSRQRR------------RSTSRYRERSRERERDRDRERERDGGRSVRPRKSPEPVVAEAAEAPSSKRYYEDRERYRSSDRERRDRDRDRDRERERDRDRHFTNDGRGLPLDPSNFTSQNPGNIKTGRPKSAAVAGGSMEKPRGQSAWDIIDTDAHWIKQQTTSIPA-SSQQNFNIIV.. 701
43 -9.900[G] KOG2175 Protein predicted to be involved in carbohydrate metabolism  ali follow..  72......................................WSEAENYDLALSFQEKAGEKICQVQGKDPSVEVTQDLIDESEEERFEEMPETSHLIDLPTCELNKLEEIADLVTSV-LENEGYIKKLLQLFQACENLENTEGLHHLYEIIRGILF-DPALAQPKRHREFLTKTAKFKEVIPITDSELRQKIHQTYVQYIQDIILPTPSVFEENFLSTLTSFIFFNKQEDEKFLSEVFAQLTDEATDDDKRLVNFFKEFCAFSQTLQPQNRDAFFKTLAKLG---------ILPALEIVMGMDDLQVRSAATDIFSYLV-----------EFSPSMVREFVMQEAQQSDDDILLINVVIEQMICDTDPELGGAVQLMGLLRTLIDPENMLATTNKTEKSEFLNFFYNHCMHVLTAPLLTNTSEDKCEKDFFLKHYRYSWSFICTPNYQTAQLLALILELLTFCVEHH--TYHIKNYIRRVLVLMNSKHTFLALCALRFMRRIIGLK----------------------------------------------------DEFYNRYITKGNLFEPVINALLDNGTRYNLLNSAVIELFEFIRV---DIKSLTAHIVEN----FYKALESIEYVQTFKGLKTKYEQEKDRQNQKL-----------------NSVPSILRSNRFRRDAKALEEDEEMWF---------------NEDEEEEGKAVVAPVEKPKPEDDFPDNYEKFMETKKAKESEDKENLPKRTSPGGFKFTFSHSASAANGTNSKSVVAQIPPATSNGSSSKTTNLPTSVTATKGSLVGLVDYPDDEEEDEEEESSPRKRPRLGS................... 849
44 -9.880[U] KOG0166 Karyopherin (importin) alpha  ali follow..  8.................................NFRLKSYKNKSLNPDEMRRRREEEGLQLRKQKREEQLFKRRNVATAEEETEEEVMSDGGFHEAQISNMEMAPGGVI------------TSDMIEMIFSKSPEQQLSATQKFRKLLSKEPNP-----------------------------DEVISTPGVVARFVEFLKRKENCTLQFESAWVLTNIASGNSLQTRIVIQIFIELLSSEFEDVQEQAVWALGNIAGDSTMCRDYVLDCLPPLLQ-SKQNRLTMTRNAVWALSNLCRGKSPPPEFAKVSPCLNVLSWLLFVSDTDVLADACWALSYLSDGPNDKIQAVIDAGVCRRLVELLMHNDYKVVSPALRAVGNIVTGDDIQTQVILNCLQSLLHLLSSPKESIKKEACWTISNITAGNRAQIQTVIDALISILQTAEFRTRKEAAWAINATSGGSAEQIKYLVELGCIKPLCDLLTVMDSKIVQVALNGLENILRLGEQ................................................................................................................................................................................................................................................................................................................................................................... 456
45 -9.750[U] KOG0946 ER-Golgi vesicle-tethering protein p115  ali follow..  14.............................................................................GPQHTEAETIQKLCDRVASSTLLDDRRNAVRALLSKKYRLEVGIMEHLIHVLQRSDSEIIGYALDILYNIISNE----------EEEEVEENSTRQSEDLGSQFTEIFIKQ--QENVTLLLSLLEEFDFHVRWPGVKLLTSLLKQLGPQVQQIVSRLMDLLADSREVIRNDGVLLLQALTRSNGAIQKIVFERLLDIISEEGNSDGGIVVEDCLILLQNLLKNNNSNQNFFKEGYIQRMKPWFEVGDENSGWSAQKVTNPGATSSCQKAMFQCGLLQQLCTILMATGVPADILTETINTVSEVIRGCQVNQDYFASVVLLMSMVNERQPFVLRCAVLYCFQCFLYKNQKGQGEIVSTLCAAVALAHALQENATQKLLQQCTNILSQGSKIQTRVGLLMLLCTWLSNCPIA--------VTHFLHNSANVPFLTGQIAENLGEEE--EKLGFISKHELYSRASQKPQPNFPSPEYMIFDHEFTKLVKELEGVITKAIYKSSEEDKKEEEVKKTLEQHDNIVTHYKNMIREQDLQLEELRQQVSTLKCQNEQLQTAVTQQVSQIQQHKDQYNLLKIQLGKDNQHQGSYSEGAQMNGIQPEEIGRLREEIEELKRNQELLQSQLTEKDSMIENMKSSQTSGTNEQSSAIVSARDSEQVAELKQELATLKSQLNSQSVEITKLQTEKQELLQKTEAFAKSVEVQGETETIIATKTTDVEGRLSALLQETKELKNEIKALSEERTAIKEQLDSSNSTIAILQTEKDKLELEITDSKKEQDDLLVLLAD 915
46 -9.680[S] KOG2365 Uncharacterized membrane protein  ali follow..  239.......................................YHLQTLDDSGSYLHRLQKLFDKNDFERSLSNFSICGRPGNEPLSPGLQSDVEDVSLSDTVDSTDTFDVKPETEVPSHQSDTFFKLLFYAC---------LGTFLYRNVWMFILAAIPVILHL------------YTVGEYTGITKFVCNKISEVYAALRFWAIEHHSAVLPLCLPGVLELNYKINTIVRDSLKASVESVTSETIEVAYLGKDLINKTITDRPELIDILPANMQSSI--EDALDNAHHYGRRKIETYIDDVHATKLKEQILEVWDRLIQYWIDFNKAGSSYG-PRVPTDALKSTFGEIVDNPDSYCVHLLTDGRLFNQGHFKELVLVAKQGIIGWAQSNTQTILEVAESLWHIIRTNMSMIMGVTGEILSLVLSGGQACIE-FFTALFYLLSSSQLGYSSSGIKIADALENSITV-VSMFRCSTFVHTVFGARIVFLPSALAAAAPFLGSYWCAVPAFLEL............................................................................................................................................................................................................................................................................................................................................................... 744
47 -9.680[KU] KOG2773 Apoptosis antagonizing transcription factor/protein transport protein  ali follow..  12  69..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................SEQSDRYKGKISSRKELDDDEDKDDEQEVSYEESDEDDENLTNFKQKLNAGGAEDSEEETAAGHSESGEESEEIESNLTDFKKKFEAGDFKYDDDEEEDDDSEEEDHSQESEGDDDDSEDDEAEDDAIKPSDVMSKTNHQAEIQKGLAVQNQLRIWERLLE. 229
48 -9.670[J] KOG2147 Nucleolar protein involved in 40S ribosome biogenesis  ali follow..  10  1................................................................................................................................................................................................................................................................................................................................................................................................................................MGVDKKQKQRKTNPF-----------ELKFNKSKHDILGRKKGAQVGAPTASRKRAHEQR-----------------TLGVEYDRKNKISKIVDKRLGEKDGKSEEEKGAMRFTEERVKNYKRASKFNLTDDGDEEEEVLTHKGKALSDIEKYDKSMISDSDDDEEPGNLGSNMVK---------------VAHFGGGEKTAEEHVREKISREDMISNLIAKTKLARHEKQQQKDELELMTESLDSKYQALMGKMKASFRPTGRQPLEKDDYDKLTITLKTEADARATPADRKLSEEEEALKEKERLETLEAAPDADVDIDAGSKADARKVQAKNSRFEVKFDDEGGLIDEDTVEKSRILKKNLDGSDESDDDEDLEDEEEDLDDLLEDEDELEEDSDDEEAQEAQKVVKKAKKSAPEPAETLPFVFEMP--KNYKKFCALLEK 401
49 -9.350[YU] KOG1992 Nuclear export receptor CSE1/CAS (importin beta superfamily)  ali follow..  10  354.....................................................FRAADEEAFEDNSEEYIRRDLEGSDIDTRRRAACDLVRGLCKFFEGFSGYVNSMLQEYAKNPSVNWKHKDAAIYLVTQKHGITQANELVNLTEFFVNHILPDLKSANVNEFPVLK----ADGIKYIMIFRNQVKEHLLVSIPLLINHLQAGSIVVHTYAAHALERLFTMRGPNNAILLTNLFKALTLPGSSENEYIMKAIMRSFSLLQEYIPTLITQLTQKLLAVSKNPSKPHFNHYMFEAICLSKANPAAVVNFEEALFLVFTEILQNDVQEFIPYV--------------------QVMSLLLETHKNDIPSSYMALFPHLLQPVLWERTGNIPALVRLLQAFLERGSNTIASAAADKIPGLLGVFQK--LIASKANDHQGFYLLNSIIEHMPPESVIFILLFQRLQNSKTTKFIKSFLVFINLYCIKYGALALQEIFVGITNLLTECPPLIGLFELPEDDTIPDEEHFIDIEDTPGYQTAFSQLAFAGKKEHDPVGQMVNNPKIHLAQSLHMLSTACPGRVPSMVSTSLNAEALQYLQGYLQAASVTL................................................................................................................................................................................................................................................................ 970
50 -9.160[YU] KOG1993 Nuclear transport receptor KAP120 (importin beta superfamily)  ali follow..  10  390....................................................ILKEEDFEEWTDSPQQWVLEQSTQDVEFNVRPCAEKLLKCFFDA---YGDIIVSPFKDMIYSVFECPKTLTQAVQ------QDTLISSFGVGYTQLKSIFPFAKWLQEAAVPNMASINDIGIRRRIAIFLSQWIEDSYKLYCSFLNLTDPCNDAVVILTTFVHVLSLFKAFESVDASLLGTLLARAGEHVAPMESTIASLLSQLWDGEPLLRARVLAVMHQFVNAIKAKSFEFSTFLYTVIEYCVNPESPEHVI-FEADAMELWSTFLMYIQ--------------------KLPETFTLLIPHLLYHLSQATST--LPFVLMIVSSYQLLMKDYSFTIFEKLNDLLDDVKNETLQALCKTVCLLIETTPMDMIYESLLNSSLLSRLLL-SIATNDKHPQVLIEYLLVVSR-REPELILKVCRKLNTLALRTNHPDVLAVLDSIMNLW-----FSVLSEVEEDANGDATIYYKNDDYSAVGFYLDETSEEMTRRKQ---------------------------LLKDPVHSVNSRSFFISVFMFCRDANGGMENFQNQYLST---------VNPALLEQFQSML................................................................................................................................................................................................................................ 983
51 -9.120[D] COG5657 CAS/CSE protein involved in chromosome segregation  ali follow..  345.....................................................LRESDEELFEDDPLEYVRRDLEGSNSDSRARSAIVLVRGLLDHFDQVSTHINANLQQFSTNPSLEWNKKYVALQLFSTRLGVTSINLMVDVVAFFENNIKPDLL----QPAGVIHPMVLAEDIKYVFTFRNQLSQQLIDIFPTILRFLEMPSFVVYTYAAIALDQLLTVRHNHVLPALNQLFLIVESASTPQKLAENDYLMKAVMR-LPAASLLLQHLTKITEEVSKNPSNPKFNHYLFESISLSKSGPQTVSQLENALLPVFQNVLIEDVTEFIPYVLQLLSQLVEASGNEPLPDFVVNLIQPCLSPALWDSKGNIPALVRLLRAMIFRGPQI-EPVLGIFQKLISSKVNDHFGFDLLDRVFTVFNANILAPYINHIFFLLLSRLKNSRTERFVLRCTIFDNLIQGVDAVQSGVFGQLMTRKISALGLLTCDLVLAPDAIYENLIIPLLTCILKLFEMPIEQAQTDADEELFMDEIDADSMSFQASFSRLATTGGK--------------------------RVDPFP---------QITDLKQYCATEMNLANRN.......................................................................................................................................................................................................................................................... 939

FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Friedberg I, Nika K, Tautz L, Saito K, Cerignoli F, Friedberg I, Godzik A, Mustelin T. Identification and characterization of DUSP27, a novel dual-specific protein phosphatase. FEBS Lett. 2007 May 29;581(13):2527-33. Epub 2007 Apr 30.