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Query: [O] KOG0546 HSP90 co-chaperone CPR7/Cyclophilin, from VFDB

Results of FFAS03 search in VFDB
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MAAEKRVFLDISVDENLIGRIEIRLFVEDAPKTCENFRALCTGEVGMTPNNKARLHYKQNEFHRIVKKFMIQGGDITEGDGRGGFSIYGRYFDDEKFKLKHSRPYLLSMANKGPNSNSSQFFITTAAAPHCNGKHVVFGEVVKGQNVVDYIDNLAVDDKSKPLAKVLISNCGELVKKKKPLKTDEELAAALEEKNNNARDNEIPKCPKSWLYRDDDNEKKHEMRNDKRREYRSRRSRSRSHEKNRDYKKENRGDSSRSQPRRDENGITVRGRGGVRFRRERSATPEHWRRNAPTKWVHDSHKHPEEDLVLast
1 -97.900[O] KOG0546 HSP90 co-chaperone CPR7/Cyclophilin  ali  100  1MAAEKRVFLDISVDENLIGRIEIRLFVEDAPKTCENFRALCTGEVGMTPNNKARLHYKQNEFHRIVKKFMIQGGDITEGDGRGGFSIYGRYFDDEKFKLKHSRPYLLSMANKGPNSNSSQFFITTAAAPHCNGKHVVFGEVVKGQNVVDYIDNLAVDDKSKPLAKVLISNCGELVKKKKPLKTDEELAAALEEKNNNARDNEIPKCPKSWLYRDDDNEKKHEMRNDKRREYRSRRSRSRSHEKNRDYKKENRGDSSRSQPRRDENGITVRGRGGVRFRRERSATPEHWRRNAPTKWVHDSHKHPEEDLV 309
2 -85.000[O] KOG0879 U-snRNP-associated cyclophilin type peptidyl-prolyl cis-trans isomerase  ali follow..  47  14.SNNPVVFFDIAVGTTEIGRMIFELFADTVPRTAENFRQFCTGEYR---PDGVPIGYKGASFHRVIKDFMIQGGDFVQGDGTGVTSIYGNTFGDENFTLKHDSPGLLSMANSGKETNGCQFFITCAKCNFLDGKHVVFGRVLDGLLIMRKIENVPTGPNNKPKLPVTISQCGQM....................................................................................................................................... 183
3 -84.700[O] KOG0865 Cyclophilin type peptidyl-prolyl cis-trans isomerase  ali follow..  50  19.SQRPKVFFDVSIGEEPAGRVTMELFNDVVPKTAENFRALCTGEKGVGE-QGVALHFKGSKFHRIIPEFMIQGGDFTRHNGTGGESIYGNKFKDENFDLKHTGPGCLSMANAGPNTNGSQFFICTVDTPWLDGGHVVFGQVTDGMSVVKKIEKMGSR-SGAPAKTVTIADCGELKSE.................................................................................................................................... 192
4 -82.900[O] KOG0880 Peptidyl-prolyl cis-trans isomerase  ali follow..  46  33.VITQKVFFDIEHGEEKVGRIVIGLYGKVCPKTAKNFYKLSTTTNS-------KKGFIGSTFHRVIPNFMVQGGDFTDGTGVGGKSIYGDTFPDENFTLKHDRKGRLSMANRGKDTNGSQFFITTEEASWLDGKHVVFGQVVDGMDVVNYIQHVSRDANDKPLEAVKIAKCGEWTPELSS................................................................................................................................. 205
5 -73.000[O] KOG0111 Cyclophilin-type peptidyl-prolyl cis-trans isomerase  ali follow..  49  137.RSNPQVYMDIKIGNKPAGRIQMLLRSDVVPMTAENFRCLCTHEKGFG--------FKGSSFHRIIPQFMCQGGDFTNHNGTGGKSIYGKKFDDENFILKHTGPGLLSMANSGPNTNGSQFFLTCDKTDWLDGKHVVFGEVTEGLDVLRQIEAQGSK-DGKPKQKVIIADCGEYV...................................................................................................................................... 301
6 -61.800[O] KOG0881 Cyclophilin type peptidyl-prolyl cis-trans isomerase  ali follow..  43  17AWQPHFVTLETSM-----GEITVELYWKHAPNTCRNFAELS--RRG---------YYNNVVFHRIIRDFMIQGGDPT-GTGRGGASIYGSEFADEHGDLRHTGAGILSMANSGPDTNGSQFFITLAPTQWLDGKHTIFGRVYTGMEVVKRIGMVETDKNDRPVDPLRIIKAKVEK...................................................................................................................................... 175
7 -49.200[O] KOG0882 Cyclophilin-related peptidyl-prolyl cis-trans isomerase  ali follow..  39  465TEGGEKVLNKEAIIHTSFGDITIRLFGDECPKTVENFCTHS-----------RRGYYNGLTFHRVIKSFMIQTGDPS-GKGTGGESIWGEDFEDEHPRLRHDKPFKVSMANAGGNTNGSQFFITVCPADWLDGKNTLFGEVTAGMSVVQRINQVSTERSGRPRESIQIMSIS......................................................................................................................................... 627
8 -48.800[O] KOG0883 Cyclophilin type, U box-containing peptidyl-prolyl cis-trans isomerase  ali follow..  30  286...............TNKGDLNLELHCDLTPKTCENFIRLCKKH-----------YYDGTIFHRSIRNFVIQGGDPT-GTGTGGESYWGKPFKDERPNLSHTGRGILSMANSGPNSNRSQFFITFRSCAYLDKKHTIFGRVVGGFDVLTAMENVESDKTDRPKEEIRIDATTVFVDPYEEADAQIAQERKTQLKVAPETKVKSSQPQAGSQGPQTFRQGVGKYINPAATKRAAEEEPSTSATVPMSKKKPSR......................................................... 512
9 -44.200[O] COG0652 Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family  ali follow..  28  19...............TNHGDITLALDAEKAPKSVANFVHYV--KKGH---------YNGTVFHRVIKGFMIQGGGFE-PGADMKQKPTDAPIDNEANNGLKNERGSIAMARTNPHSATAQFFINVVDNDFLNHGYAVFGKVTEGLDVVDKIRAVRTGNQDVPMEDVVIESA.......................................................................................................................................... 175
10 -43.100[O] KOG0415 Predicted peptidyl prolyl cis-trans isomerase  ali follow..  21  7...............TTLGDLIIDLFVKERPRCSLNFLKLC-----------KKKYYNLNQFHSIERNYVAQTGDPT-GTGKGGESVYGRYFERE--KMRHTRMGIVSFVNNGDNMLGSQFFITLGELDYLDDQHTIFGQVTEGLETLEKLNEQLADTNNRPFKDIRISHTIVLDDPDEDARISFPPRSPSPTYEMLTDQIALDEKEDEDEGKTAEEIAEELQQREMAEQAQILEMVGDLKDADEVPPENVLFVCKLNPVTTDEDLEIIFSR..................................... 261
11 -42.000[O] KOG0885 Peptidyl-prolyl cis-trans isomerase  ali follow..  23  10.PTSGKVLLKTTV-----GDIDIELWARECPKACRNFVQLCLEG-----------YYKNTEFHRLVKGFIVQGGDPN-GDGTGGESIYGQPFKDEHSRLRYTRRGLVGMANSGKDDNGSQFFFTFAPTPELQNKNTLFGKITDTIYNMLKLEDGIVDHQERPMHAHRIVSTEVLILSQPSTKSKKTKKERQGVKNFGLLSFGEEAEGDEEETNVYVKQNAGKAKSLHDVTDDPKLSKEPIRVPKVEKADIEEHLSDDCPEDSVKDKPSTASSDLIKMKLSKRSKSGADKKVQPVEEKSDSEDDEDVLLT 312
12 -17.400[O] COG4070 Predicted peptidyl-prolyl cis-trans isomerase (rotamase), cyclophilin family  ali follow..  12  379.........KVRTLGIDPDKILEIELDPAAPRSSWYFRRLT-----------------GLIDTPILKVHFAFPGMKV-VMFEGDKS-LAKGLIPENTPERCVKKGNIGITNMGVRLEDNDEYG---PTGEPFNGTNMIGKITGGIENVEKLKEGDT......................................................................................................................................................... 513
FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Li W, Godzik A. cd-hit: a fast program for clustering and comparing large sets of protein or nucleotide sequences. Bioinformatics. 2006 May 26;