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Query: [T] KOG1323 Serine/threonine phosphatase, from VFDB

Results of FFAS03 search in VFDB
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MLTRVKSAVANFMGGIMAGSSGSEHGGGSCGGSDLPLRFPYGRPEFLGLSQDEVECSADHIARPILILKETRRLPWATGYAEVINAGKSTHNEDQASCEVLTVKKKAGAVTSTPNRNSSKRRSSLPNGEGLQLKENSESEGVSCHYWSLFDGHAGSGAAVVASRLLQHHITEQLQDIVDILKNSAVLPPTCLGEEPENTPANSRTLTRAASLRGGVGAPGSPSTPPTRFFTEKKIPHECLVIGALESAFKEMDLQIERERSSYNISGGCTALIVICLLGKLYVANAGDSRAIIIRNGEIIPMSSEFTPETERQRLQYLAFMQPHLLGNEFTHLEFPRRVQRKELGKKMLYRDFNMTGWAYKTIEDEDLKFPLIYGEGKKARVMATIGVTRGLGDHDLKVHDSNIYIKPFLSSAPEVRIYDLSKYDHGSDDVLILATDGLWDVLSNEEVAEAITQFLPNCDPDDPHRYTLAAQDLVMRARGVLKDRGWRISNDRLGSGDDISVYVIPLIHGNKLSLast
1 -143.000[T] KOG1323 Serine/threonine phosphatase  ali  100  1MLTRVKSAVANFMGGIMAGSSGSEHGGGSCGGSDLPLRFPYGRPEFLGLSQDEVECSADHIARPILILKETRRLPWATGYAEVINAGKSTHNEDQASCEVLTVKKKAGAVTSTPNRNSSKRRSSLPNGEGLQLKENSESEGVSCHYWSLFDGHAGSGAAVVASRLLQHHITEQLQDIVDILKNSAVLPPTCLGEEPENTPANSRTLTRAASLRGGVGAPGSPSTPPTRFFTEKKIPHECLVIGALESAFKEMDLQIERERSSYNISGGCTALIVICLLGKLYVANAGDSRAIIIRNGEIIPMSSEFTPETERQRLQYLAFMQPHLLGNEFTHLEFPRRVQRKELGKKMLYRDFNMTGWAYKTIEDEDLKFPLIYGEGKKARVMATIGVTRGLGDHDLKVHDSNIYIKPFLSSAPEVRIYDLSKYDHGSDDVLILATDGLWDVLSNEEVAEAITQFLPNCDPDDPHRYTLAAQDLVMRARGVLKDRGWRISNDRLGSGDDISVYVIPLIHGNKLS 514
2 -77.600[T] KOG0700 Protein phosphatase 2C/pyruvate dehydrogenase (lipoamide) phosphatase  ali follow..  16  141FMSGPLDRVGLFSGPLDKPNSDHHHQFQRSFSHGLALRVGSRKRSLVRILRRAISKTMSRGQNSIVAPIKSVK---DSDNWGIRSEKSRNLHNENLTVNSLNFSSEVSLDDDVSLENQNLQWAQGKAGEDRVHVVVS--EEHGWLFVGIYDGFNGPDAPDYLLSHLYPVVHRELKGLLWDDSNVESKSNGDESCSNQEKDETCERWWRCEWDRESQDLDRRLKEQISRRSGSDRLTNHSEVLEALSQALRKTEEAYLDTADKELALMGSCVLVMLMKGEDIYVMNVGDSRAVLGQKSEPDYWLAKIRQDLERINEE--------------TMMNDLEGCEGDQSSLVPNLSAFQLTVDHSTNIEEEVERIRNEHPDVTNERVKGSLKVTRAFGAGFLKQPKDYVGKSPYINCLPSLYHHRLGS----KDRFLILSSDGLYQYFTNEEAVSEVELFITLQPEGD------PAQHLVQELLFDFHELLEIPQGERRRYHDDVSIVVISLEGRMWKS 660
3 -76.800[T] KOG0697 Protein phosphatase 1B (formerly 2C)  ali follow..  25  3..............................................................................................AFLDKPKMEKHNAQGQGNGLRYGLSSMQGWRVEMEDAHTAVIGLPSGESWSFFAVYDGHAGSQVAKYCCEHLLDHITNNQDFKGSAGAPSV-----------------------------------------------------ENVKNGIRTGFLEIDEHMRVEKKHGADRSGSTAVGVLISPQHTYFINCGDSRGLLCRNRKVHFFTQDHKPSNPLEKE-----------------------------------------------------RIQNAGGSVMIQRVNGSLAVSRALGDFDYKCVHGKGPTEQLVSPEPEVHDIERSE---EDDQFIILACDGIWDVMGNEELCDFVRSRLEVTDDLE-----KVCNEVVDTCL-------------YKGSRDNMSVILICFPNAPKVS 298
4 -76.700[T] KOG0698 Serine/threonine protein phosphatase  ali follow..  24  3..............................................................................................QTLSEPVTTKDTACCANASYRVGSSCMQGWRVDMEDAHTHILSLPDDPQAAFFAVYDGHGGASVAKYAGKHLHKFI------------------------------------------------------------TKRPEYRDNSIEVALKKAFLDFDREMLQNGSLDEQTAGCTAIVVLIRERRLYCANAGDSRAIACISGMVHALSVDHKPNDAKESK-----------------------------------------------------RIMASGGWVEFNRVNGNLALSRALGDFIYKKNLLKTPEEQIVTAYPDVEVLDITE----DLEFVLLACDGIWDVMSNFEVCQFVHKRIRDGMEPE-----LICEELMNSCLSPDGHT-------GNVGGDNMTVILVCLLHNKSYE 293
5 -27.700[T] COG0631 Serine/threonine protein phosphatase  ali follow..  15  318LFRESQRTQFGSIIQILGDLQQGKIY-----------------------SIAQLRSRLQEVATELEATTTPIFEPMEAEQTNAPTVLQADDVEDPSGKGDDMPTVVLSVQLSSLEDAGRTDVGRRHHNEDYFGIETKTEKLQARGLYILCDGMGGHAGGEVASELAVITLRQYFQ----------------------------------------------------QHWTDNQLPAEEIIRESVYLANQAIYEKNQQEARSGVGRMGTTLVMLLVQGSQAAVAHVGDSRLYVTRKRGLEQVTVDHEVGQREIDRGVE---------------------------------------------ASIAYARPDAY------------QLTQALG------------PRDETAINPSVEFFDINE-----DSLLVLASDGLSDTNWQTHLLPLLS---------SSANLEQGVAELIDLA-------------NQYNGHDNITAILVRAKVRPNLG 675
6 -23.000[T] KOG1379 Serine/threonine protein phosphatase  ali follow..  15  1................................................................MAIPVTRMMVPHAIPSLRLSHPNPSRVDFLCRCAPSEIQPLRPELSLSVGIHAIPHPDKVEKGGEDAFFVSSY-----RGGVMAVADGVSGWAEQDVDPSLFSKELMANASRLV------------------------------------------------------DDQEVRYDPGFLIDKAHTATTSR----------SATISILAMLEEVGILKIGNVGDCGLKLLREGQIIFATAPQEHYFDCPYQ------------------------------------------------------------------------SSEGSAQ----------------LDASQFSIVEVQK-----GDVIVMGSDGLFDNVFDHEIVSIVTKHTDVAESYMFFGITITARLLAEVAS-------------SHSRDTEFES............ 269
7 -6.660[TK] COG2208 Serine phosphatase RsbU, regulator of sigma subunit  ali follow..  13  2...................................................................................................................................................................................................................................EQVQYDYAISESIFTNLMEEMCHQVEHGIHYISTPSTIFNGDLIVVANRPHGGVYVM-IADA------TGHGLPAAISTIPATRTFFSTAQKGLSLGEMVIELNHSLERFLPVGMMLAASVFEVRANGFEISWWGGGLPEAYLLDHHGNIVSRLISNHMPLG-VLPSNEFEADVQHFKLEP--------------------NQKLVCYTDGIIEAMNEQGEYERLEHVLTKAY----------SEALIPTLYDAVKKFS------NRGKGDDLSILTMTFPITNS.. 247
8 -6.570[T] KOG3971 SAP-90/PSD-95 associated protein-related protein (Vulcan)  ali follow..  11  800..........................................................................................................................................................................................................................................................................................................................................................................LQAERDRMEGWCQQMEREERENNLPIRTAVGSAQL------------LMAQKFYQFRELEENLNPNAHPRPTSQDGFWDMLQLSENISMKFDELHQLKANNERSLESSQRQEARKRLMAAKRAASVRQNSATESAESIEIYI---EAQTRL. 977
9 -5.630[O] COG2192 Predicted carbamoyl transferase, NodU family  ali follow..  13  269.....................................................................................................................................................................................................................................LTQREMDLAASVQAVTEEVVLKLARFARQETGERHLLAGGVALNCVANGDDIWIQAAGDAGGAVG-----SALAAWHGYLGNGRSPDGRDRMTGAYLGPAFDQREVEKRLTASGA-----------------TVLSDDDLIARTVDAIVDEKAVGWMQ-PRALGGRSILGDPRSPIMQKTLNLKPSVRREDVAEDVDVDSPYMLLVGD----ALFGIDRLNVPRSGIPAVTHVDYSARVQTVHRLVNTSFNVRGEPIVCTPEDAFRCGTEIECLVV......... 585
10 -5.540[G] KOG3765 Predicted glycosyltransferase  ali follow..  11  6...................................................................................................................................................................................................................................................................RGRRKFLAASLSLLCIITWIYLFSGSFEDGKPVLESQAHSPRYTASSQRERESLEVRMREVEEENRALRRQLSLAQGRAPSHRRGNHSKTYSMEEGTGDSENLRAGIVAGNSSECGQQPVVEKCETIHVAIVCAGYNASRDVVTLVKSVLFHRRNPLHFHLIADSIAEQERVIVLDTD-LWAVFHKFKGQQVLG----------------LVENQSDWYLGNLWKNHRPWPALGRGY--NTGVILLLLDKLRKMK 311
FFAS is supported by the NIH grant R01-GM087218-01
1 4 7 8 6 9   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Liu T, Rojas A, Ye Y, Godzik A. Homology modeling provides insights into the binding mode of the PAAD/DAPIN/pyrin domain, a fourth member of the CARD/DD/DED domain family. Protein Sci. 2003 Sep;12(9):1872-81.