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Query: [F] KOG1385 Nucleoside phosphatase, from VFDB

Results of FFAS03 search in VFDB
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MTNTDVRKRKLATDEKPPRRKSSGSPNASSGGNRGPSGLKISFLCLIISVILLLFVFGFVSENASPYLARLASKFGYSKVQYAAIIDAGSTGSRVLAYKFNRSFIDNKLVLYEELFKERKPGLSSFADNPAEGAHSIKLLLDEARAFIPKEHWSSTPLVLKATAGLRLLPASKAENILNAVRDLFAKSEFSVDMDAVEIMDGTDEGIFSWFTVNFLLGRLSKTNQAAALDLGGGSTQVTFSPTDPDQVPVYDKYMHEVVTSSKKINVFTHSYLGLGLMAARHAVFTHGYKKEDTVLESVCVNPIIANRTWTYGNVQYKVSGKENGKSSAEQPIVDFDACLELVKSKVMPLVKPKPFTLKQHAVAAFSYYFERAIESGLVDPLAGGETTVEAYRKKAQEICAIPNDEQPFMCFDLTFISTLLREGFGLNDGKKIKLYKKIDGHEISWALGCAYNVLTSDEKFSNSLast
1 -134.000[F] KOG1385 Nucleoside phosphatase  ali  100  1MTNTDVRKRKLATDEKPPRRKSSGSPNASSGGNRGPSGLKISFLCLIISVILLLFVFGFVSENASPYLARLASKFGYSKVQYAAIIDAGSTGSRVLAYKFNRSFIDNKLVLYEELFKERKPGLSSFADNPAEGAHSIKLLLDEARAFIPKEHWSSTPLVLKATAGLRLLPASKAENILNAVRDLFAKSEFSVDMDAVEIMDGTDEGIFSWFTVNFLLGRLSKTNQAAALDLGGGSTQVTFSPTDPDQVPVYDKYMHEVVTSSKKINVFTHSYLGLGLMAARHAVFTHGYKKEDTVLESVCVNPIIANRTWTYGNVQYKVSGKENGKSSAEQPIVDFDACLELVKSKVMPLVKPKPFTLKQHAVAAFSYYFERAIESGLVDPLAGGETTVEAYRKKAQEICAIPNDEQPFMCFDLTFISTLLREGFGLNDGKKIKLYKKIDGHEISWALGCAYNVLTSDEKFSNS 464
2 -108.000[F] KOG1386 Nucleoside phosphatase  ali follow..  22  1......................................MRVSLRFTILAVSAMIFFPVIVFIYVVEAHTSPKVIADDQERSYGVICDAGSTGTRLFVYNWISTSDSELIQINKPVMKKISPGLSTFGTKPAQAAEYLRPLMELAERHIPEEKRPYTPVFIFATAGMRLIPDEQKEAVLKNLRNKLPKITMQVLKEHIRIIEGKWEGIYSWIAVNYALGKFNRQKTVGMIDMGGASAQIAFELPDTDSFSSINNLGCREDDSLFKYKLFVTTFLGYGVNEGIRKYEHMLLSKLKDQNGTVIQDDCMPLNLHKTVTLERRGTGNWNTCSNEVKKLLNPESKAEAAKCYFGAVPAPSIPLSNIEMYGFSEYWYSTHDVLGLGGQYDTQQYCSKRWSTIQAESPRADEERLRTQCFKSAWITSVLHDGFSVDKTNKFQSVSTIAGQEVQWALGAMIYHMRFFPLRDSS 476
3 -103.000[GO] COG5371 Golgi nucleoside diphosphatase  ali follow..  21  2..............................................................................VRKYGIFIDAGSSGSRLLIYSWDYDTDSSLSDKGGKWSLKVQPGISSFANNPKHVGKKLKELLDFAAHAIPKDVHKETPVFLSATAGMRLLGVDAQNKILSHACRYIKKNYIPNCSNSIRVIDGKAEGMYGWLATNYLLKTLKDTSTVGFLDMGGASVQIAFELPPSQLKNYSTVHIGLQNGQQLEYPLFVTTWLGFGANEAYRRYLGLLIESENGKVGNTLSDPCSLRGRTDIDGIEFAGTGDLKQCLKLTYNLLNKDKPCSMDPCNFDGISIPPVDFANTEFVGVSEFWYTTNDVFDMGGSYHVDEYCGTEWETMLSRLPSTDENKLEKLCFKASWALNVLHEGFDVPKSNPFTSLEKIERTEVSWTLGQVLLYASNQQLLAKP 442
4 -14.900[FP] COG0248 Exopolyphosphatase  ali follow..  18  2...........................................................................TTHPANVLASVDLGSNSFRLQICENNNGQLKVIDSFKQMV--RFAAGLDEQKNLSAASQEQALDCLAKFGERL--RGFRPEQVRAVATNTFR--VAKNIADFLPKAEAALG---------PIEIIAGREEARLIYTGVIHTLPPGGGKMLV--IDIGGGSTEFVI---------------------GSTLNPDITESLPLGCVTYSLRFFQNKITAKD........................................................................................................................................................................... 182
5 -9.530[O] COG0443 Molecular chaperone  ali follow..  14  5...................................................................................LGIDLGTTNSCMAVME-----GGDAVVLPNAEGSRTTPSVVGFSKNPENTVYSIKRHMGEANYKVTLNGKTYTPQEISAMI-LQKLKTEAEAYLGETIKQAVITVPAYFNDAQRQATAGSIAGLEVLRIINYGLDKGDVDQKILVYDLGGGTFDVSI-----------------LELGGGVFEVKSTS---LGGDDFDQRVIDHLLAEFKKTEGIDL-------------------SKDKAILQRLKDAAEKAKIELSGVTVTNINLPFLTVGPDGEPKHMDIDLTRAQFQKMTEDLLEKTLVSMRRALSDSKLTPNDLDKVILVGGATRMPAVVELVENFTGKKPYKNINPDEAV-------AIGAAIQ........... 352
6 -7.620[O] KOG0100 Molecular chaperones GRP78/BiP/KAR2, HSP70 superfamily  ali follow..  17  25......................................................................STAKEEATKLGSVIGIDLGTTYSCVGVYK-----NGHVEIIANDQGNRITPSWVGFTDNPERTVFDVKRLIQKDRKLVPGETKVFSPEEISAMI-LTKMKETAEAYLGKKIKDAVVTVPAYFNDAQRQATAGVIAGLNVARIINYGLDKKGGEKNILVFDLGGGTFDVSV-----------------LTIDNGVFEVLSTN---LGGEDFDHRIMEYFIKL............................................................................................................................................................................. 275
7 -7.270[E] COG4819 Ethanolamine utilization protein, possible chaperonin protecting lyase from inhibition  ali follow..  8..................................................................................SVGIDIGTTTTQVIFSHLELVNRAAVSQVKREISWQSPVFFTPVDKQGGLKEAELKSLILEQYQAAGIAPESVDSGAIIITG--ESAKTRNARPAVMALSQSLGDF--------VASAGPHLESVIAGHGAGAQTLSEQRLCRVLNIDIGGGTANYALFDAGKISGTA------CLNVGGRLLETDSQGRVVYAHKPGQM...................................................................................................................................................................................... 198
8 -7.210[G] COG2971 Predicted N-acetylglucosamine kinase  ali follow..  15  3............................................................................NAPMPYLIAVDGGGTGCRALLAK-----------ADGNVISKAVGGPANIGADTAMAIANVMETVTRAVHDLHISRLDETGAVL-GLAGAELVAGLPFAWVRIVSDTVTALQGALGDNDGAIVILGTDHAGGARLGRELL------EETLLAFDGMASRTELTEAVMVRFNDDLRQIISFSRKATAADYAIFA................................................................................................................................................................................................... 209
9 -7.030[G] COG1070 Sugar (pentulose and hexulose) kinases  ali follow..  11  8............................................................................SESKYYLMALDAGTGSIRAVIFDLEGNQIAVGQAEWRHLAVPDVPGSME--FDLNKNWQLACECMRQALHNAGIAPEYIAAVSACSMREGIVLYNNEGTPIWACAVSELKELHNNTFENEVYRATGQTLALSAWLAHHWLAYMLSGE----AVDPSNAGTTGLLDLTIRD----KPALLDMAGLRADILSPVKETGTLLGVSSQAAELCGLKVGTPVVVGGGDVQLGCLGLGVVRPAQTAVLGGTFWQQVVNLAAPVTDPEMNVRVNPHVIPGMVQAESISFFTG--LTMRWFRDAFCAEEKLIAERLGIDTYTLLEEMASRVPPGSWGVMPIF--NKATLFRALEENAAIVSACNLQQIADFSTIHPSWALGCAI............ 462
10 -6.760[O] KOG0102 Molecular chaperones mortalin/PBP74/GRP75, HSP70 superfamily  ali follow..  41.......................................................................NASGNEKVKGPVIGIDLGTTTSCLAIME-----GQTPKVIANAEGTRTTPSVVAFTKNPENTFFATKRLISNGDAWLEARGKTYSPSQIGGFI-LSKMRETASTYLGKDVKNAVVTVPAYFNDSQRQAT--KAAGAIAGLNVLRVVNE-KNDAIVAVFDLGGGTFDISI-----------------LELNNGVFEVRSTN---LGGEDFDVALVRHIVET-------------FKKNEGLDLSKDRLAVQRIREAAEKAKCELSSLSKTDISLPFITADATGPKHIN-------MEISRAQFEKLVDPLVRRTIDPCKRALKDANLQTSEINEVILVGGMTRMPRVVETVKSIFKREPAKSVNPDEAV-------AIGAAIQ........... 421

FFAS is supported by the NIH grant R01-GM087218-01
1 4 7 6 1 7   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Jaroszewski L, Rychlewski L, Zhang B, Godzik A. Fold prediction by a hierarchy of sequence, threading, and modeling methods. Protein Sci. 1998 Jun;7(6):1431-40.