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Query: [R] KOG2203 GTP-binding protein, from VFDB

Results of FFAS03 search in VFDB
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MGENDDGCSTQLIDGNGEFNVKGLDNFVKKTKLSDCGLSYAVVAIMGPQSSGKSTLLNHLFKTSFREMDAFAGRSQTTKGIWMARCVGIEPFTIAMDLEGTDGRERGEDDTTFEKQSALFAIAVADIVLINMWCHDIGREQAANKPLLKTVFQVMLRLFSPRKTTLLFVIRDKTKTPIELLERALREDIQKIWDSVRKPEAHKNTPLNEFFNVMIVALSSYEEKEKQFEQEVAELRQRFFHSISPGGLAGDRRGVVPASGFSFSSQQIWKVIKENRDLDLPAHKVMVATVRCEEIANEKLRDLATNESWLELHEAAEGGLVPGFGKKLSSILEKYFSEYDAEAIYFDEGVRKEKRLQLKLNALDFVYPSYATMLGHLRSNALESFKIRLEQSLNQGEGFAKAVRDSQQSCLMVFDKGCEDAAVKQATWDASKIREKLCRDIDAHTFFARSAKLSELTANYEKRLTQALSEPVESLFEAGGKETWPSIRKLLKRETETAVTDFLDVVTGFELDHAKIDAMVQNLKNYSQSLVEKKAREEAAKILIRMKDRFSTVFSHDKDSMPRVWTGKEDIRAITKDARAEALSLLSVMTAIRLDERPDNIESTLFSSLMDGTVSAASSHNRSVGTSTDPLASSSWEEVPPNNILLTPVQCKSLWRQFKSETEYTVTQAISAQEAHKRNNNWLPPAWAIVLMIVLGFNEFMMLLKNPLYLLGFFVAFLLSKALWVQLDIPREFQHGAVAGVLSITSKFLPTVMNLLRKLAEEAQGKTTQEVPDLSASQTYRQQSPSHSISSTISESVASNISSAGDDAEYSSPSPALVRRRNTNNVQESEISQMLast
1 -187.000[R] KOG2203 GTP-binding protein  ali  100  1MGENDDGCSTQLIDGNGEFNVKGLDNFVKKTKLSDCGLSYAVVAIMGPQSSGKSTLLNHLFKTSFREMDAFAGRSQTTKGIWMARCVGIEPFTIAMDLEGTDGRERGEDDTTFEKQSALFAIAVADIVLINMWCHDIGREQAANKPLLKTVFQVMLRLFSPRKTTLLFVIRDKTKTPIELLERALREDIQKIWDSVRKPEAHKNTPLNEFFNVMIVALSSYEEKEKQFEQEVAELRQRFFHSISPGGLAGDRRGVVPASGFSFSSQQIWKVIKENRDLDLPAHKVMVATVRCEEIANEKLRDLATNESWLELHEAAEGGLVPGFGKKLSSILEKYFSEYDAEAIYFDEGVRKEKRLQLKLNALDFVYPSYATMLGHLRSNALESFKIRLEQSLNQGEGFAKAVRDSQQSCLMVFDKGCEDAAVKQATWDASKIREKLCRDIDAHTFFARSAKLSELTANYEKRLTQALSEPVESLFEAGGKETWPSIRKLLKRETETAVTDFLDVVTGFELDHAKIDAMVQNLKNYSQSLVEKKAREEAAKILIRMKDRFSTVFSHDKDSMPRVWTGKEDIRAITKDARAEALSLLSVMTAIRLDERPDNIESTLFSSLMDGTVSAASSHNRSVGTSTDPLASSSWEEVPPNNILLTPVQCKSLWRQFKSETEYTVTQAISAQEAHKRNNNWLPPAWAIVLMIVLGFNEFMMLLKNPLYLLGFFVAFLLSKALWVQLDIPREFQHGAVAGVLSITSKFLPTVMNLLRKLAEEAQGKTTQEVPDLSASQTYRQQSPSHSISSTISESVASNISSAGDDAEYSSPSPALVRRRNTNNVQESEISQM 834
2 -35.300[R] KOG2037 Guanylate-binding protein  ali follow..  11  2APEINLPGPMSLIDNTKVVNPEALKIL------SAITQPVVVVAIVGLYRTGKSYLMNKLAGKKFSL---GSTVKSHTKGIWMWCVPPEHTLVLLDTEGLGDIEK---GDNENDSWIFALAILLSSTFVYNS----MGTINQQAMDQLHYVTELTDRIKANSSPAFVWTLRDFTLELEVDGEPITADDYLELSLKLRKKKSKSFNDPRLCIRKFFPKRKCFVFDWPAPKKYLAHLEQLKEEELNPDFIEQVAEIAVNGPRLESLVLTYVNAISSGDLPCMENAVLALAQIENSAAVEKAIAHYEQQMGQKVQLPTET---LQELLDLHRDSEREAIEVFMKNSFKDVDQMFQRKLGAQLEARRDDFCKQNSKASSDCCMALLQDIFGPLEEDVKQGQKLQELKNKYYQVPRKGIQAKEVLKKYLESKEDVADALLQTDQSLSEKEKAIEVERIKAESAEAAKKMLEEIQKKNEEMMEQKEKSYQEHVKQLTEKMERDRAQLMAEQEKTLALKLQEQERLLKEGFENESKRLQKDIWDIQMRSKSLEPIC............................................................................................................................................................................................................................................................................................. 588
3 -16.400[O] KOG0448 Mitofusin 1 GTPase, involved in mitochondrila biogenesis  ali follow..  10  47..........RIATEDDLVEMQGYKDKLSIIGEVLSRRHMKVA-FFGRTSSGKSSVINAMLWDKV------SGIGHITNCF----CALLRDDLVLVDSPGTDVTTELDSKFCLDADVFVLVANSESTL------------MNTEKHFFHKVNE------WLSKPNIFILNNDASASEPEYMEDVRRQHMERCLHFLVEELKVANALEAQIFFVS--------------AKEVLSARKQKAQGMPESGVALAEGFHARLQEFQNFEQIFEECISQSA-----KTKFEQHTIRAKQILATVKNIMDSVNLAAEDKRHYSVEEREDQIDRLDFIRNQM----------------NLLTLDVKKKIKEVTEEV-ANKVSCAMTDEICRLSVLVDEFCSEFHPNPDVLKIYKSELNKHIEDGMGRNLADRCTDEVNALVLQTQQEIIENLKPLLPAGIQDKLHTLIPCKKFDLSYNLN......................................................................................................................................................................................................................................................................................................................................................................... 508
4 -15.500[R] COG3596 Predicted GTPase  ali follow..  17  40.........................................VIGIMGKTGAGKSSLCNALFAGEVSPVSDVAA---CTRDPLRFRLQIGEHFMTIVDLPGVGESGVRDTEYA---ALYREQLPRLDLILWLIKADD--RALATDEHFYRQVIG------EAYRHKMLFVISQSDKAEPTSGGNILSTEQKQNISRKICLLHELFQPVHPVCAV----------------------------------------SVRLQWGLRVMAERMIKCLPREPSSPVVALRTWVAREQARDDFGETVDTILDTVSTFPLIPAPVRTIIQAVRSSVVSVARAVWDFF............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 288
5 -13.900[R] COG1159 GTPase  ali follow..  14  1................................MSTDKTYCGFIAIVGRPNVGKSTLLNKLLGQKISIT---SRKAQTTRHRIVGIHTEGPYQAIYVDTPGLHMEEKRAINRLM-NKAASSSIGDVELVIFVVEGTRWTPDDEMVLNKLRDG-----------KAPVILAVNKVDNVQEKVDLLPHLQFLASQFLDIVPISAETGMNVDTIAGIVRKHLPE-----------------------AIHHFPEDYITDRSQRFMAS------EIIREKLMRFLGAELPYSVTVEIERFVTNERGGYDINGLILVEREGQKKMVIGNKGAKIKTIGIEARKDMQE............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. 267
6 -13.000[R] COG1084 Predicted GTPase  ali follow..  20  165..........................................VVIAGFPNVGKSTLLRTLTGAEPEVAD-------TTKGIQIGHLERKWKRIQVIDTPGL--LDRPVEDMNNIELQAMVALEIADVIMF------IFDASETCGYTLESQYSLYLGIRSVFDIPVVTVFNKMDLAENVKY----LEEYINMVEDPLKVSAFEGRGVSKIIK.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. 319
7 -12.500[R] COG0699 Predicted GTPases (dynamin-related)  ali follow..  9  245.........IEIRNI------------LQDIQDNNSAVTLPSIVVIGSQSSGKSSVLEAIVGHEFL-----KGSNMVTR-LTLVHSADTAIPY-ITDFSKIDLNMAVPSSQGVDDNPIRLTIYIPNLSLIDL-QIHSEDQPADLDMKISKLCEKYIR-----EPNIILAV-DLANSAALRASRRVDPLGLRTIGVVTKMDLVPPSKAISILHNNNYPLH---------------VISRIVPTGRFSAGQNLTDLVSTQENSYFSTHQQFADARIGNYLGIQSLRKCLINVLEYTMSKN----------------------LQHTADSIRTELEECNYQYKVTADSYIAEGLDIFKAAFKEFTQKFGKSEVRDLLKSSLNEKVMDLLAERYWTDDDISNWSKHTNALDEHWKYKLDSCVSTLTRMGLG-STLLVTDSISKCIDEITKASPFADHPAA--------MQYIMNAAQDILRRRFHATSEQVENCVKPYKYDVEVNDDEWKSSRGQAEKLLQRELGLCQSALEKIKNAVGSRRMNQVLQYLEE.............................................................................................................................................................................................................................................................................................. 757
8 -12.500[R] KOG1490 GTP-binding protein CRFG/NOG1 (ODN superfamily)  ali follow..  12  171..........................................VLICGYPNVGKSSFMNKVTRADVDVQP-------TTKSLFVGHTDYKYLRYQVIDTPGI--LDRPFEDRNIIEMCSITALALRAAVLF---FLDISGSCGYTIAQQAALFHSIKSLFM--NKPLVIVCNKTDLMPMENISEEDRKLIEEM-QVLLKMSTLTDEGVMSVKNAACERLLDQRVEAKMKSKKINDHLNRFHVAIPKPRDSIERLPCIPQVVLEAKAKEAAAMEKRKTEKDLEEENGGAGVYSAS-LKKNYILQHDEWKEDIMPEILDGHNVADFIDPDILQRLAELEREEGIREAGVEEADMEMDIEKLSDEQLKQLSEIRKKKAILIKNHRLKK------TVAQNRSTVPRKFDKDKKYTTKRMGRELSAMGLDPSSAMDRARSKSRGRKRDRSEDAGNDAMDVDDEQQSNKKQRVR------------------SKSRAMSISRSQSRPPAHEVVPGEGFKDSTQKLSAIKISNKSHKKRDKNARREADRVIPTLRPKH............................................................................................................................................................................................................................................................................................ 657
9 -11.600[R] COG1160 Predicted GTPases  ali follow..  14  1.....................................MATPVVALVGRPNVGKSTLFNRLTRTRDALVADFPG---LTRDRKYGHAHIAGYDFIVIDTGGIDGTEEGVEEKMAEQ--SLLAIDEADIVLFLV---------DARAGLTAADIGIANYLRQRQNKITVVVANKTDGIDADSHCAEFYQ-----LGEIEQIAASQGRGVTQLME--------------QVLAPFAEKMENADENDRTSEEEQDEWEQEFDFDSEEDTALIDDALDEELEEEQDKNIKIAIVGRPNVGKSTLTNRILGE----------DRVVVFDMPGTTRDSIYIPME-RDGQQYTLIDTAGVRKRGKVHLAVEKFSVIKTLQAIQ--DANVVLLTIDARENISDQDLSLLGFILNAGRSLV---------IVVNKWDGLDQDVKDRVKSELDRRLDFIDFARVHFISALHGSGVGNLFDSIKEAYACATQKMTTSLLTRILQMATDEYAHPGGYNPPIIVVHGNQMDKLPDSYKRYLSNYYRKSLKIIGSPIRLLFQEGSNPFAGRKNKLTPNQLRKRKRLMKFIKKAKR.............................................................................................................................................................................................................................................................. 504
10 -11.400[E] COG4917 Ethanolamine utilization protein  ali follow..  13  1.......................................MKRIAFVGSVGAGKTTLFNALQGNYTLARKTQAVEFNDKG---------------DIDTPGEYFNHPR-------YHALITTLQDVDMLIYVHGAND------------ESRLPAGLLDIGVSKRQIAVISKDMPDADVAATRKLLLE------EPMFELNSHDPQSVQQLVDY............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. 141
11 -11.200[UR] KOG0446 Vacuolar sorting protein VPS1, dynamin, and related proteins  ali follow..  10  22.........IPIVNK--------LQDIFAQLGSQS--IALPQVAVVGSQSSGKSSVLEALVGRDF------RGNDICTR-LQLVQTKPSSDGGSDEDFSEIRREIESGENKGVSDIPIGLKIFVLDISLVDLPGITKVPVGDQPSDIEARIRTMILTYIKEPSCLILAVSTDLANSDALQIAGNADPDGHRTIGVITKLD--RGTDARNHLLGKTIPLRYVGVVNRSQEDILMNRSIKDALVAEEKFFRSRPVYSGLTDGVPQLAKKLNQVLVQHIKALLPSLKS-----RINNALFATAKEY-ESYGDITESRGGQGALLLSFITKYCEAYSSTLEGKSKEMSTSELSGGARILYIFQSVFVKSLEEV--DPCEDLTADDIRTAIQNATGPRSALFVPDVPFEVLVRRQISRLLDPSLQCA------------RFIFDELVKISHQCMMKELQRF-----PVLQKRMDEVIGNFLREGLEPSQAMIRDLIEMEMDYINTSHPNFIGGTKAVEQAMQTVKSS------RIPHPVARPRDTVEPERTASSGSQIKTRSFLGRQANGIITDQAFPTAADAERPAPAGNGSTSWSGFSSIFRGSDGQAAAKNNLLNKPFSETTQEVYQNLSTIYLKEPPTILKSSET--HSEQESVEIEITKLLLKSYYDIVRKNVEDL-------VPKAIMHFLV----NYTKRELHNVF--------------------------------IEKLYRE------NLIEELLKEPDELAIKRKRTQETLRILQQANRTLDELPLEAESVERGYKIGSEAKHEELPGT----RRSRTETNGNGRLHM 782
12 -11.200[R] KOG2486 Predicted GTPase  ali follow..  13  138..........................................FALVGRSNVGKSSLLNSLVRRKLALTSKKPGKTQCINHFRI------NDKWYLVDLPGYGASAPHELKQDWNKFTKDYFLNRSTLVSVFLLVDASIPVKPIDLEYASWLGQNQVP--------MTLIFTKCDKRKKKKNGGKKPEANIKEFQDLIQ-SSVTNQGRDEILLHMAQLRNYWLKH.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. 318
13 -10.500[TU] KOG1954 Endocytosis/signaling protein EHD1  ali follow..  12  94.........................................MILLVGQYSTGKTTFIRYLLESDFPGIRIGPEEEGSIPGNALVVDAKKQESVTIVDTPGILSGEKQRIDRGYDTGVLEWFAERVDRIILLFDAHKLD---------ISDEFKRCIEALAGNEDKIRIVLNKSDMVDHQQLMRVYGALMWSLGKVFKTPE.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 282
14 -10.300[R] KOG1673 Ras GTPases  ali follow..  10  104..........................................ISLLGDCQTGKTTFVVKYVGDENQSFLEMTGLNLMDKTFYVQGVTIS---FSIWDVGGDEKRSKDHIPIACKDAVA--ILFMFDLT-VFGWYSQARKWNKTAIPILQWTIVTQARAYAKVMNASLFFSSATHNINVNKIFKFILARLFNLPWKIDRNLTLGEPIID.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. 285
15 -9.730[U] KOG0090 Signal recognition particle receptor, beta subunit (small G protein superfamily)  ali follow..  12  58..........................................VLLSGLSGSGKTVLFYQLRDGSSAVTSMEPNEGTFVLHNENNTKKGKVKPVHLIDVPGHSRLISKLEEYLPRAAAVVFVVDALEF-------------LPNIRAASEYLYDILTNASVIKNKTPVLLCCNKTDKVTAHTKEFIRKQMEKEIDKLRVSRSAISTADIA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. 214
16 -9.690[V] KOG1707 Predicted Ras related/Rac-GTP binding protein  ali follow..  10  1..........................MWMGVGDSSGSPKPIRIVVVGEKGSGKSSLIMAAARNTFHPNIPSLLPYTNLP----SEFFPDRIPATVIDTSSRPEDKGKVVKEVRQADAIVLTFAFDR--LSKYWLPLFRQLEVRVPIIVEVDNKEAYNHFSIEQITSALMKQYREVETSIQWSAQRLDQAKDVLYYAQKAVIDPVGPVFDLSDEELNELQKKCFDTPLVPCEIKQMKNVMQVTFPQGV----NERGLTLDGFLFLIQTLWTMLRKSNDLRLGDDLVPYSSFKRQADQSVELTNVAIEFLREVYEFFDSNGDNNLEPHEMGYLFETA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 348
17 -9.610[H] COG1763 Molybdopterin-guanine dinucleotide biosynthesis protein  ali follow..  16  1.......................................MNIFGITGWKNSGKTTLTEKLV------------AELVRRGWKVSTVKHAHHDF--IDKPGADSMHELRGEDEPPLESILSRLAPCDIVLVE------GYKRESHRKIETRRLEAKDRTPLSAGDPNIVAIAADFAVTDKSLPAFDLDDVKSIVDFIER............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ 161
18 -9.490[P] COG1116 ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component  ali follow..  16  18.........IELKDVQISFRLADGGRFDAVAESNLAVAENEFVAIVGPTGCGKSTLLNAVAGLLTPASGTVEISGQRLQG-WKTVL---ENVAIGLEIAGTPKAKAREQAREWLNKVGL--VGLAQVLIRNLMDEPFGPLDAQTRVIMG---DLLLDLWSQDKKAVMFVTHDLEEA---------------LADRVVIMSAGPRARIMAEYRIPLAR-------------------------------PREISEIRLDNQFHEIHREIWSALKEEVLKGYQQTSGERS.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. 281
19 -9.420[U] KOG0077 Vesicle coat complex COPII, GTPase subunit SAR1  ali follow..  18  5.....................DWFYGILASLGLWQKEAK---ILFLGLDNAGKTTLLHML-------KDERLVQHQPTQHPTSEELSIGKIKFKAFDLGGHQIARRVWKDYYAKVDAVVYLVDAYD-------KERFAESKRELDALLSD---------EALATVPFLILGNKIDIPYAASEDELRYHL..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 146
20 -9.380[DZ] COG5019 Septin family protein  ali follow..  14  73...............NGYVGFASLPNQWHRRCVRQ-GFNFNVL-VLGESGSGKSTLVNTLLNRDVSLTGDFGVNPEPTVMINSSAVEIVEN-LNVIDTPGFGDFIDNTDDQYLELEKHNPRSTIQDIFFIQPTGHAISAMELRVMLALHEKVNII-----------IIAKADLTDDELNFTKEMILRDIQY--------------------NIRIFFPPTYETDDPESVAENADIMSRIP--ASNTFVVNNEGKRVRGRRYP------WGVVENEEHSDFPKLREMLIRTHLEELKEQTNKLYEAYRTERLLSSGISQDHSVFREVNPSAKLEEERALHEEKLMKMEAEMKTIFSQKVQEK-----------------EDRLKQSENELRTRHREMKAALEKQKADLIDHKNRLMQAKAAAENEKSKRKFFK.................................................................................................................................................................................................................................................................................................................................................................................................................. 469
21 -9.360[P] COG0370 Fe2+ transport system protein B  ali follow..  16  6..........................................YCILGNPNTGKTSLFNALTGSYEYVGN---------SGVTVEKKVGRSKTGKLIDLPGIYDLNPISRDETVVTRFLL-----FDCMLNIVDSSQIERNLNLTVQLLEY------------GAPVVMGLNMIDVAAGRGIHLNIQNLAKKLRIPILPVVARSGKGTEDILS.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. 155
22 -9.350[F] COG1618 Predicted nucleotide kinase  ali follow..  14  1..............................MRIEGKEKTMLRIAVTGSPGVGKSTVVAKTAEK-------AEKPGFKIGGI-RTAEIRKEGHREGFSIRDLATGKTGLDDLERIGANAVRNALACDLVVID----EIGPMELISQSFVSAVEEVL-----ESDKPVLAVLHTVDKGNRDELPEKITNRFLRKLG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ 184
23 -9.290[J] KOG1191 Mitochondrial GTPase  ali follow..  14  337.......................VESALDTANYDKLLQSGLQIAIVGRPNVGKSSLLNAWSKSERAIVTEVAG---TTRDVVEANVTVRGVPITLLDTAGIRETNDIVEKIGVER--SETAAKVADVIIM--------------------AVSAVEGWTEEDTELLRKIQSDKVGVSFYDLFGGLLYLKQPMILVMNKIDCAPPGSCDQLEDQ-VFTSAVTGQGIEELEDAILEILGLDRVPTGGHQWTVNQRQCEQLVRTKEALVRLREAIEDEIPIDFWTIELREAALSLAQISGQDVSE.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 599
24 -9.250[P] COG4525 ABC-type taurine transport system, ATPase component  ali follow..  13  1...........MLNVSGLWAEYQGKPALQDVSLQIASGQL--VVVLGPSGCGKTTLLNLIAGFMTPSAGVITLDNIPVSG-WRDVV---SNVEFGLQLAGMSKEQRRVTALKMLNRVGL--VGIARALAVDLLDEPFGALDAFTREQMQ---ELLLTIWRDTGKQILLITHDIEEA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. 192
25 -9.220[S] COG3523 Uncharacterized protein conserved in bacteria  ali follow..  7  193............................................VVGSPGDGKTTALLN--GLQFPLAEQMEQTSRITLHCWFT------NEAVLIDTAGGEASAAQRNAGEWQGFLGLLR-PLNGVILTDLTAQSPAERLAACAALRARLAELRETLGIRFPVYLVVTKMDLLPGFSEYFRTLTSHLRAQIWGFTLPYSRRRKAGDPQALHAAC---------AQELARLTLRLDQGLDTRLQEEYDLKSRQRLYEFAALGEPLLEAIEQIFLDSKFDTSAAQAQADAVADQLSIWQRFVRAIKTARGESSASLPHALPDGNRSYFLHDLLTQFIFREAHLVEPNLQWAWRYRLLRLGGHLLVLVLAFLLWQG-QTNGDYLNEISARATRLDGDVKAYTGKPAMAPVPALLDSARELSAWPELDPDAPPLAWRYGLYSV-PPVTDSVASLYNRLLDQLLLPPLVKRMEYVLADAIARQDS--------------KAAYDALRIYLLLNLDKDHEDKYNAAEIQSWVINDLGNSDSVAGFGGRAAVLTHIEALFDGSRVVHSPYEKDEALIRQARAFLDGHTST--RIYARALAAMESEAPQEFTLVRAVGADAGTVFVRSNGAPLDDKRLPEFVAAATANDGWVMGRESTPKKLTDSLRSQIPGQEQSVAREVRRL-----------YLTEYARRWQDFLDSIH-----------------SINSAGEEGSSGLAYDLQVLRTLASPDSPLMRLGKAVVEQTTLVPPPDPQARQKQLAQRASGNAGKVVQTAKLFQDIHPEERLEKTLVDDRFAALREVIAGRTDGGQSGGGT 985
26 -9.150[R] COG2229 Predicted GTPase  ali follow..  16  2.....................................RENKII-FTGPVGVGKTTAIAAISDEALVQTDASASKRNTTVAMDYGAISLDEDTKVHL---GTPGQER------FNFMWEILSQGSMGLVLL---------LDNARTNPLKDLEFFLHSFRGLLEKAPVVVGITKMDIRSQPGIDVYHKYLAKHNLNVPEIDARKEDDVKQLVSAMLFSI........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ 172
27 -9.130[R] KOG0075 GTP-binding ADP-ribosylation factor-like protein  ali follow..  18  5.......................INRILEWFKSIFWKEEMELT-LVGLQFSGKTTFVNVI------ASGQFAEDMIPTVGFNMRKITRGNVTIKVWDIGGQPRFRSMWERYCRGVNAIVYMVDAAD-------LDKLEASRNELHSLLDK---------PQLAGIPVLVLGNKRDLPGALDETGLIERMN.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 148
28 -9.120[R] COG1341 Predicted GTPase or GTP-binding protein  ali follow..  13  1...........MMRMASNKAMFTNDDRLLAVEKIESLRKPAKVMIIGDVDTGKTTLANELLGFRVAIIDSDIGQKGILPPATISLAFVDSHFTSLDDLKAFSHYFIGTIT---NQYFGEMVVGVMKLVLID----TTGMIYGSGVELKRMKIEAV-------KPNLILALER--NNELAPILKGYEDITIRL-FSRSERRELRREKWRKYFE.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. 212
FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Godzik A. Fold recognition methods. Methods Biochem Anal. 2003;44:525-46. Review.