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Query: [MU] KOG2515 Mannosyltransferase, from VFDB

Results of FFAS03 search in VFDB
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MPSKAPRKSLSVSFVWTFSILAVLRLTSASFRVIDDCDEVYNYWEPLHYLLYGYGLQTWEYSPEYAIRSWFYIALHAVPGFLARGLGLSRLHVFYFIRGVLACFSAFCETNLILAVARNFNRAVALHLTSVLFVNSGMWSASTSFLPSSFAMNMVTLALSAQLSPPSTKRTVKVVSFITIGAVIGWPFSAALSIPFILLELVDLKGRFRHLFCRWFKAIFVALLITGICITVDSLFYHRIQFVAWNIVKYNVLAKDGRGPDIYGTEPWWYYFANLSLQHNIVLWFAMACGPLVLLAAFTNWINLDSFLDLSSVISPFYIWLFIFIIQPHKEERFMYPIYPVLCLAAAIGLDMSLKLMIQILSSINETVRSKFPVRFVVLCVYAIIGCLSIARILAIQNYNAPMIIYPAISFLETDNNVTTNVCVGKEWYRYPSTFFLPDNSRLKFVKSEFDGILPGEFVESNSTWWNREGYYQIPEHMNEFNNEEPTRYTSLESCDFLIDLEFDHSKATVNEPIYSKSDGWIPVMVYPFIDTKQTPFMGRAFAVPFIEPKWGRYEILVKKPVKIDFSNLRRASKQQALast
1 -182.000[MU] KOG2515 Mannosyltransferase  ali  100  1MPSKAPRKSLSVSFVWTFSILAVLRLTSASFRVIDDCDEVYNYWEPLHYLLYGYGLQTWEYSPEYAIRSWFYIALHAVPGFLARGLGLSRLHVFYFIRGVLACFSAFCETNLILAVARNFNRAVALHLTSVLFVNSGMWSASTSFLPSSFAMNMVTLALSAQLSPPSTKRTVKVVSFITIGAVIGWPFSAALSIPFILLELVDLKGRFRHLFCRWFKAIFVALLITGICITVDSLFYHRIQFVAWNIVKYNVLAKDGRGPDIYGTEPWWYYFANLSLQHNIVLWFAMACGPLVLLAAFTNWINLDSFLDLSSVISPFYIWLFIFIIQPHKEERFMYPIYPVLCLAAAIGLDMSLKLMIQILSSINETVRSKFPVRFVVLCVYAIIGCLSIARILAIQNYNAPMIIYPAISFLETDNNVTTNVCVGKEWYRYPSTFFLPDNSRLKFVKSEFDGILPGEFVESNSTWWNREGYYQIPEHMNEFNNEEPTRYTSLESCDFLIDLEFDHSKATVNEPIYSKSDGWIPVMVYPFIDTKQTPFMGRAFAVPFIEPKWGRYEILVKKPVKIDFSNLRRASKQQA 577
2 -92.800[MO] KOG1771 GPI-alpha-mannosyltransferase III (GPI10/PIG-B) involved in glycosylphosphatidylinositol anchor biosynthesis  ali follow..  15  3..............IWFWLAILVFRWWNALWKTFFQPDEFYQSLEVAHHFIFRYGFLTWEWTS--AIRSALHPLIFAALYRVLQVLKLSYFVFTNAPKLLQGTFAAILDYGTYKFALVRYGSKTANWTLACSLVSIMNAYVGVRTFSNSLETTLTSIGFYYFSYYLKYENSSPGFISVAAFACFIRPTNILVWIFPLLFWNKNPQTPYALGYGRLFGIFVLCVSLFLVNIIADRILYGRFVFPIISFFQFNVTSGLSS---LYGLNAWHYYLSQALPLICGGFLPFVLLTMD------------------LQTAGTILCVFFPYSLIGHKELRFVYPISPILLTLAGKFFSSFSSWKRAA-----------------RFFFLIGLGHALVITFLCRFHQFGVMEVMPLIHSLAEKNQ---TGLILAPCHTTPWQSHIHSPFGWKFLTCEP----FEKPFDETDRFYENMPTFL------DKIKEWPDYLIFFEERFYSLYSYLD-------------------------SRGLKYEEVQRYYLIPESRERAGALLVYKK.................. 505
3 -92.300[MU] KOG2516 Protein involved in dolichol pathway for N-glycosylation (mannosyltransferase family)  ali follow..  13  1...........MRWSVLDTVLLTVISFHLIQAPFTKVEESFNI-QAIHDILTYSVFDISQYDHFPGVVPRTFVGAVIIAMLSRPYLYLTSIDVQLVVRGIVGLTNGLSFIYLKNCLQDMFYDSAGTWFLLFLIGSFHLMFYSTRTLPNFVMTLPLTNVALGWVLLG---RYNAAIFLSALVAIVFRLEVSALSAGIALFSVI---FKKISLFDAIKFGIFGLGLGSAISITVDSYFWQEWCLPEVDGFLFNVVAGYAS---KWGVEPVTAYFTHYLRMMFMPPTVLLLNYFGYKL----------APAKLKIVSLASLFHIIVLSFQPHKEWRFIIYAVPSIMLLGATGAAHLWENMKV------KKITNVLCLAILPLSIMTSFFISMAFLYISRMNYPGGEALTSFNDMIVEKNITNATVHISIPPCMTGVTLFGELNYGINYDKTENTTLLQEMWPS----------DFLITHEPTASQLPFENKTTNHWELVNTTKMFTGFDPTYIKNFVFQERVNVLSLLKQIIFDKTPTVFLKELTANSIVKSD--VFFTYKRIKQDEKTD.......... 551
4 -85.900[G] KOG4123 Putative alpha 1,2 mannosyltransferase  ali follow..  14  1MRLTTQNRSPGDRHLSTYFCFAAVRLLLVFVLGYVHPDEFFQSVEVMTGDHFRLETRTWEFNNSLPVRSIVLPFALLRIPWSFYEF-LGTYAYVVFPRLIYTLISFSNDYCLFRICRLYGLR--FEIRLLAMGSSWILLVFGTRTFSNSLEMAMCSWLLCLVSEPAHNLQHLMAMSTICVAGVFNRPTFLLFGAPMVFFWLLRGMGTRRDFNLRIALFCLCALPALVLFIFCDSLYYQNFVFTPWNFIKANLDSAQTA---SHGVHPCYVHLMVNMPMLFNVLALASLGAFAQLLLRAEYQVLPRFQSIVSLMSGAIFVPLFFLSLINHQEPRFLLPVTFPLILLHAPKLITGFSAKYPPLLRLFYDKLLSSKASGPYLLKIWYVSNVALTLFFGFIHQAGVYPLAADISHVIATKPAATHVHL-ITSHIYSLPLHLINIPSSRVLHFNRLTHYGGLPLDSLLQKVKLISGSCEVKKSGPSRRRYKLYLAIPASLSADLHEALVHSNASSYLNFELLKVFYPHLSTEAFCSAEQLPAFSFAYLNKQFSSFVHQLGLVTRNKPRYVSLAYSGCSPTKG 696
5 -20.000[M] COG1807 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family  ali follow..  12  9...............GLFAFIACYYLLPISTRLLWQPDETRYAEISREMLASG------DWI-VPHLLGLRYIAGYWINSIGQWLFGANN----FGVRAGVIFATLLTAALVTWFTLRLWDKRLALLATVIYLSLFIVYAIGTYAVLDPFIAFWLVAGMCSFMQAQTWKGKSAGFLLLGITCGMGVMTKGFLALAVPVLSVLPWVATQKRWKDLFIYGWLAVISCVLTVLFWHYFFWVE------HIQRF-------ALDDAQHRAPFWYYVP--------VIIAGSLPWLGLLPGALYTGWKNRKHSATVYLLSWTIMPLLFFSVAKGKLPTYILSCFASLAMLMAHYALLAAKNNPLALRINGWINIAFGVTGIIATFVVSPW................................................................................................................................................................................................ 366
6 -18.900[O] COG4745 Predicted membrane-bound mannosyltransferase  ali follow..  13  18...............AVTAAALLARLWALGWRVAH--DEARVADWTLQYMDLG----AWQYRPII-------PFLPHVNGVVFDVFGATD----FTMRLVVAVVGGLLPLTAW-LYRTRLSDVEVGALAVLLAANPVVLYYSRFMRNDLLLAGFMFTAVGLFVRFLDTHRARYLYASAVPFALAFTTKENSLLYPLCWLGALALVTDDRRIRHRAWRAKAALAGSALTAAVIVVSFYAPKP----AVLEAATIGTYHEFADLWSYVAFLSHDLSVLVACGTVVSVAAVVGYLANR-----YATETPRPLVSFAFYWGVFSVLGYPAVDIAAAWTAVNALVPLAIPAAVGVGAVVRYGRRGAAAGDT----AAVRLAVTVLVVSAAGMGAVAAETTYAHPQSPQPTIDDIQRAATATSGLDVLYYGDS-DRLPFPWYLSQVGANATTVQTAA.............................................................................................................................. 509
7 -18.700[S] COG4713 Predicted membrane protein  ali follow..  11  2.....NKRVVKVEYIFMAFALFFGVLFAVINAPFQDPDEPIHFYR-AYQISTGQNKVAFNDFRSATIYSDIVYIPQSIGINLAKIFRASALYMMYFGRIANLICWTIIVFFSVKLI------PFKKNLMAFLALTPMNLYQAASLSADAMTNSMAFLSIALVLREEEAKLTKRQIVTMIIAFTLLAFSKRIYFVMCILFFIIPIKKFNSKKDYIGTFVIMLGACLMSLVTVMEFVLSHPITY--IHILLRTFHFKMSF-ISFIGVFGW---LDTRLPLNLYLFYGVALVLIALFEHTLIEKNKDRIIMFIVFIINVGLIMSALYNIIEGIQGRYFIPIIPLLGCFIGVKANKSRNVYSKV------------------VLAISTFTILTYSVLQLLLRFYGIRIL............................................................................................................................................................................ 456
8 -16.900[O] COG4346 Predicted membrane-bound dolichyl-phosphate-mannose-protein mannosyltransferase  ali follow..  8  170......................................................................EHPFLGKDIIALGMLIEDKP----FYWRIPGIIEHALIVIIVTLVAYKITKSYASSIAATFAALDPLLFATGIVAMLDIHVAFFIALFMLFLA------LDRIRLSGIALGLAAATKLSGAFAFPILWFKILKEKDLKEYLISGLVLPMV--SFLIPEITIIKAIGFIPWLEEFIASFSWHLSFKGEH----SEAPFWMWFHFDPDVYAVTDPILMISMIVFVFAVPYVSLRRKGLSEIFWMFWSIIAFFALQYILGGKTQFIFATPLIPPGAVALGVISYEIIKWEYFERSLRIYLNYLRSIAKPLKKVI.................................................................................................................................................................................................... 475
9 -15.400[S] COG5542 Predicted integral membrane protein  ali follow..  10  20.AIRMTRSGYNYFKGICVCTFLLSTILYLGIAVIMSH-ISWIRWDAIYFVMAVNGS-LFE-------QEWAFSSLWPKIISFLAFRSKDVVLLGIVSCFASIFFHAIACYALYLLTKSIFNQKMTAYTVIFYCFSPSGIYMSV-GYTESLFAAFSFLGLLLF-----IKKQQYPAAFLWSLATLIRSNGIFWCIFFGMPAIGTLKISLERLQLTFMQVSQLVGYGTKCLIILVPFFYNQYLG-----LIYPAVQEK-----YWNVGFLRYWTLNNIPNFLFALLSIIPILFALFYSISGSTLHSFRSIKSHLVLSALYLYIGCFHMHTQVLNRMSSALPLLYWSMAHAT------------LYAKSRNLKAFGHCILFVWIVYTVIQAGL........................................................................................................................................................................................... 418
10 -14.500[O] KOG2292 Oligosaccharyltransferase, STT3 subunit  ali follow..  12  5.PKMLNSKVAGYSSLITFAILLIAWLAGFSSRLIHEFDPWFNYRATAYMVQNGW-RAWYPLGRIVGGTVYPGLMITSGGIHWLLHVLNIPVHIRDICVFLAPIFSGLTSISTYLLTKELWSAGAGLFAASFIAIVPGYISRSVAGS-EGIAIFALQFTYFLWVRSVKTGSVFWSAAAALSYFYMVSAWGGLIPLHVFVLLIMGRYSPRLLTSYSTFYILGLLFSMQIPFVGFQPIRTSEHMAALGVFVLLMAVATLRHLQSVLSRNEFRKLFIVGGLLVGVGVFVAVVLHILVCAFPVGVWYCIKQINDERVFV---VLYAISAVYFAGVMVRLMLTLTPVVCMLAGVAFSGLLDVFLQEDSSKRMG.................................................................................................................................................................................................................. 440
11 -14.400[S] COG5305 Predicted membrane protein  ali follow..  10  1................MFSLGNSFLPVPL--------DQAIAPDILLQPLQPNPASGIGDVIHNLITEDNHPPLYFVLVHLWMKLFPNQGELVLLAARSFPALLGAVSIPLTYILGRLAFSSLVGQLAAGMMAVSPYAVYLGQEVRHYTLAMIWVIASLSCLVIATRHIQNRTLWVGINALGIATHYFFTLTLCAEALVLIFLAWQQSTQAKTLVFFSPLWWRIYAVAAGTA-------AGLVWLPSILENRYRSSLTAW-IFQAFAAWVTMIMLLPIESSQLAVVIASGLVMLIFAKFQLQQPQTSLATQVFIGVVLGAIALFFILTYVDIRYNFVYFPAVIILVGASLAVYWQTSKKA------------------VMIIWLMGFVSAVTVICNLGYQKYYRPDLLVQIIQQNSQVPVLIAT......................................................................................................................................................... 416
12 -14.000[R] COG1287 Uncharacterized membrane protein, required for N-linked glycosylation  ali follow..  10  1MANSATITS-DWKIPLKVLILICIAVASVSSRLIHEFDPWFNFRASKILVEQGFERSWYPLGRVAGGTLYPGLMVTSGIIFKVLHLLRINVNIRDVCVLLAPAFSGITAIATYYLARELKSDACGLLAAAFMGIAPGYTSRSVAGSYDAIAITLLMSTFALWIKAVKSGSSFWGACTGLLYFYMVTAWGGMIPLHVFVLLLMGRYTSKLYIAYTTYYVIGTLASMQVPFVGFQPVSTSEHMSALGVFGLLQLFAFYNYVKGLVSSKQFQILIRFALVCLVGLATVVLFALSFLIWLLPVGVYLCFKELRNEHVFIIIYSVLGTYFCG--VMVRLVLTLTPCVCIAAAVAISTLLDTY............................................................................................................................................................................................................................ 435
13 -12.300[S] COG5650 Predicted integral membrane protein  ali follow..  10  32.RFGRFAQVGTQRFWTPLRVLITTSLVFLAMGFLTKARQYTSAYNDIVPLYGGRGIDYMEYPVLGGIFQWICGIITRFLYPVVDVIPFHTLPESGLYFIVTALALAFFWVLVIRMMVELTGNRVWDTVLVAASPLVAVHAFTN----DTPAIAAVIGAMLAVKRGNP-----LVAGVLIGAGTAFKLWPLYLLGAYLVLAV--KNKNLKPFITMAAAAAVTWLVVNVPVMIAYPKAW-------NEFLRLNRERGAEWTTIYQVIDRNLPINLNDPVLLNVLSFGLFGASCVAILILGLKVQRTPRVAELAFLIVAAFLLFNVWS-------QYSLWLVPLAVLAMVTDAMVWPILMWHMLGTDNKGLPHEMLDLIVISRDAFIVVMIVGVIRQMLGRRADPVM............................................................................................................................................................................. 460
14 -12.000[OKIT] KOG2642 Alpha-1,2 glucosyltransferase/transcriptional activator  ali follow..  10  6.PPRISLPFAAISRKSDFLLGASFSCIHVLLTTIVYMDEIFHITQTRSYC-------NYSWNPLITTPPALYVISMPLCGGNERYANSILFFAIPAFCRFRRMFVRVRIPTLKIYLKNTDLQQDVWLTASIVGMLPILISSSILFYTDLLSLTSVIWGFSI--------GNPIASAFLFLISILTRQTNIIWAAIYAFSVIASRIDKSKIIISTAFSLWPFITLAIGFQIVLGDAKAHQPKFHVAQFFYMVAFCAAHTWTQII-DHPYRHFTFYIWRRFLANPTMRTTLAPLYVFSLRFMTTSTPSVHIFHKILFIIASLLVLVPA----EMRYY--IIPYVLW......................................................................................................................................................................................................................................... 391
15 -11.800[S] COG5617 Predicted integral membrane protein  ali follow..  13  11...............ATISVIEYIPLYLAPSPPALQINGNGHLFKVHKLM--TSGWKPWIEDWYAGYPFLRF-----LSYLTAGVLGKVLGSDTKGYAATLMLTSFLGALALHHYLKSTGREPCISPLIFLLFPWHLTVSYIEGNFPRANAIHLAPLFLLSLYWLREKRERYLIASALGISIVALTYSILPLLIITGILILWDDLRTMTALGNGIK--------VLGAVIGLTSFWY----VPFLFDKKWVEFWNISENKALFKSF--SLNPTLLKSPFGILLILLLLIFAIFAIKNLVDRKKVILAGLYLYLSLGFYSPTTWLYSFPLLSIVPPYRWFDLEALIIPLLIGESLKRVQR--------------KSMVALVIIPFTVLAFMNVPKINPYPQDLIKICENIKEEPGDD................................................................................................................................................................. 380
16 -11.400[R] KOG2647 Predicted Dolichyl-phosphate-mannose-protein mannosyltransferase  ali follow..  9  1MAKALESNSKSRKETILIKYAIFSRLLVLFLTILWR--ENSVVWDSVYFLITECGYEYEQTYAFLPLLPFFISLLSRTVFAPLVPLIGLRAVMVLSGFTVSNLAFIFAAIYLFRVSVIILDTEASFRASIIFCFNPASIFYSS-IYSESLYALFSIGGVYHL-----LSGTSNVGVLWFALSGCARSNGILNAGYICFQTMHRAYEALYQKRRAYLAMQVFIAGFLRCICICLPFVAFQAY------LLYNFIQ--KILVSDRGVGFLKYFQFKQLPNFLLASPILSLAVCSITGTKVAPEKSGYLSADVFPFIVHLSFMVTTAFFIMHVQTRFL--ASPPLYWFASSLIGS................................................................................................................................................................................................................................. 460
17 -11.200[S] COG3463 Predicted membrane protein  ali follow..  11  1MKSLIDKKLLVIIFIAYTFIIFKTCLVLYENFSYKSLD-IFS--QSLYSTLNGKFMYNTVEAQLYSAPNHFAVHFQPILLLLLPVYAIMPSPVVLL--LIQAIFLALSATLALLIACEELNHREAILVASLYIFNSSLLGIALFEFPVSLAVPLFFIAYMLL-----KRGKMKLFYLTSVLILLTKEDSFLGVVSLSLWKILMDGLNPESFRKNRGLILLSIASMMYGIIVIK-----------------------VVIPHLGMGYIYESLYSEFELTRRKLLYFIVFNASFGFLTFL--------SSKGLVSVALPWLESMLSSRDTQTMFHYPYMLLPLSYLVAIEGFKKS----KKVAVSLIVAGILTSMATIPITFKPPKAENPLIHFAVLKPIPGKDASWEAITIVKTLEGPIYTQPEFYPHLSTRIDVYVYPKGIKPRVI................................................................................................................................... 406
18 -10.400[S] COG4485 Predicted membrane protein  ali follow..  9  1MKSFLKTYRTYFISFIIPVVIMSGVYLSQSIYWNSD-DQYVIFDVALRNILHGNSNLFYTFTSGLGFYALSSYYLGSFLAPLVYFFDLTNMPDAIYLTTLLKFLIGLSTFFSLNKLFQSIPQILKLALSTSYALMSFTVSQLEIKLDVFILIPLIITGLHLLITEK---KLLLYFTSLSILFIQNYYFGYMTVLFLIFWYLCQISWDFKTRKSSVLDFIVISFLAGMASLIM--------TLPTLFDLQTHGEKLTEVTKFQTESSWYLDLFAKQFIGSMIFVGLFPFILTILFFTLKSIKFHVKLIYVIFFAFLIASFYIEALDLFWQ--HRYAWIFSTLLIYTAAEVLKRLKELKVWNFLVSLFLVVAGFLATIYLILLTLEFLVVYSLLLLAVIKKFISVNLFAIL........................................................................................................................................................................ 439
19 -9.870[S] COG4906 Predicted membrane protein  ali follow..  9  188...............WSIAISLMWSTVFGVSWNYI--DINGEYYYANLVLARGI----WSISTYDQYNTIASVNILGPVYSL-----ILNMWIVPIFKIIYPLVFSLVPVILLKAYERLLGNKWAELSVLFFMFFFQFFVSNMALARMMIVEVYLALLAYATI----RKINPLFLILFLASLAVSHYGTAYLTMFALLTLPLIRVLENEQRISNKLIAVFWVVTLLWYAYVGGGFQFNNLVIIGYQTLLKDLFNPQYSQGLELIVA-----FMREIAKLINLFAQGLISIGVLTVLNRLIRGRKVKHLEFYALSFAFFAYDIAGIVVPY--NRLYHLTQFFIAPYLLIGFDSVKRIMNNLSKNRHTLPLKNSVEIAGVFLVVYFIFTS............................................................................................................................................................................................. 554
20 -9.550[GE] KOG2575 Glucosyltransferase - Alg6p  ali follow..  13  34.....THKGTTTSFLCISLFALLIRSAVTMYP-FGDFEAQRHWMEITTNL--YNDLTYWDYPPLTAYQSYIHGIFLRFFNPESVALLSSRGHESYLGKLLMRWTVLSSDAFIFFPAALFFGKSEVAWHIAMILLNPCLILIDHGHFQNCISLGLTVGAIAAVLCESE------VLTCVLFSLALSHKQMSAYFAPAFFSHLLGKCLRRKSPILSVIKLGIAVIVTFVIFWWPYVHSLDDFLMVLSRLAPFERGIYEDYVANFWCTTSILIKWKNLFTTQSLKSISLAATILASLPSMVQQILSPSNEGFLYGLLNSSMAFY-LFSFQVH-EKSILMPFLSATLLAL....................................................................................................................................................................................................................................... 396
21 -9.110[O] COG1928 Dolichyl-phosphate-mannose--protein O-mannosyl transferase  ali follow..  11  63...............IFTVLGMFTRMYKIGRNNHVVWDEA-------HFGKFGSYYLRHEF--YHDVHPPLGKMLVGLSGYLAGYNGSWDFPSYVKMRLFQAMFSSLCVPLAYFTGRAIFSRLSVWLFTILVIFENSYATLGKFILLDSMLLFFTVSSYFCLAKMRKSPFSARWWLWLCLTGLNLGCAISVKMVGLFIISVVGIYTRSVSWKVYVNHWLARIFGLIIIPVCVFLLCF---------KIHFDLLSNSGPGDSTMPSL....................................................................................................................................................................................................................................................................................................................... 318
22 -9.020[S] KOG4587 Predicted membrane protein  ali follow..  8  169................GVFIVAGTVASSIFYLGVLVSDSIFGGFLSVLCFAFNHGEATRVQWTPPLRESFAFPFIIGHIAILTFVIKYKKSGHSMILLLTSMAVPALLFWQF------------TQFAFFTQICSIFLAFSLDLIPFSTAKTVIHSHIISFLI--------GFLLLFGNEMMITALYFPSILALGMIIYISPLLSNLKFRPAYVLFLAIIFASITLGLKIGLSKGLGIEDDAHIFDILRSKFTSFANFHTRLYQYSTIEKLCGTLLIPLALISLVTFVFNFVKNTNLLWRNSEEIGENGEILYNVVQLCCSTVMAFL----MRLKLFMTPHLCIVAALFANS-----KLLGGDRISKTIRVSALVGVIAILFYRGIPNIRQQLNVKGEYSNPEMLFDWIQHNTKQDAVFAG--------TMPVMANV--------LTTLRPIVNHPHYEHVG----IRERTLKVYSMFSKKPIAEVHKIMKEMGVNYFV-FQLMNCSNDERRPECVYRGMWDEELCDLWILASKDNSRIAPFKIVYNAN--RNYIVLK................... 682
FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Li W, Godzik A. cd-hit: a fast program for clustering and comparing large sets of protein or nucleotide sequences. Bioinformatics. 2006 May 26;