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Query: [R] KOG2714 SETA binding protein SB1 and related proteins, contain BTB/POZ domain, from VFDB

Results of FFAS03 search in VFDB
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MAGGHCGSFPAAAAGSGEIVQLNVGGTRFSTSRQTLMWIPDSFFSSLLSGRISTLRDETGAIFIDRDPAAFAPILNFLRTKELDLRGVSINVLRHEAEFYGITPLVRRLLLCEELERSSCGSVLFHGYLPPPGIPSRKINNTVRSADSRNGLNSTEGEARGNGTQPVLSGTGEETVRLGFPVDPRKVLIVAGHHNWIVAAYAHFAVWYRIKESSGWQQVFTSPYLDWTIERVALNAKVVGGPHGDKDKMVAVASESSIILWSVQDGGSGSEIGVFSLGVPVDALFFIGNQLVATSHTGKVGVWNAVTQHWQVQDVVPITSYDTAGSFLLLGCNNGSIYYIDMQKFPLRMKDNDLLVTELYHDPSNDAITALSVYLTPKTSVSGNWIEIAYGTSSGAVRVIVQHPETVGSGPQLFQTFTVHRSPVTKIMLSEKHLVSVCADNNHVRTWTVTRFRGMISTQPGSTPLASFKILSLEETESHGSYSSGNDIGPFGERDDQQVFIQKVVPITNKLFVRLSSTGKRICEIQAVDCTTISSFTVRECEGSSRMGSRPRRYLFTGHTNGSIQMWDLTTAMDMVNKSEDKDVGGPTEEELLKLLDQCDLSTSRCATPNISPATSVVQHSHLRESNSSLQLQHHDTTHEAATYGSMRPYRESPLLARARRTESFHSYRDFQTINLNRNVERAVPENGNLGPIQAEVKGATGECNISERKSPGVEIKSLRELDSGLEVHKIAEGFSESKKRSSEDENENKIEFRKKGGFEGGGFLGRKKVPYLASSPSTSDGGTDSPGTASPSPTKTTPSPRHKKSDSSGQEYSLLast
1 -232.000[R] KOG2714 SETA binding protein SB1 and related proteins, contain BTB/POZ domain  ali  100  1MAGGHCGSFPAAAAGSGEIVQLNVGGTRFSTSRQTLMWIPDSFFSSLLSGRISTLRDETGAIFIDRDPAAFAPILNFLRTKELDLRGVSINVLRHEAEFYGITPLVRRLLLCEELERSSCGSVLFHGYLPPPGIPSRKINNTVRSADSRNGLNSTEGEARGNGTQPVLSGTGEETVRLGFPVDPRKVLIVAGHHNWIVAAYAHFAVWYRIKESSGWQQVFTSPYLDWTIERVALNAKVVGGPHGDKDKMVAVASESSIILWSVQDGGSGSEIGVFSLGVPVDALFFIGNQLVATSHTGKVGVWNAVTQHWQVQDVVPITSYDTAGSFLLLGCNNGSIYYIDMQKFPLRMKDNDLLVTELYHDPSNDAITALSVYLTPKTSVSGNWIEIAYGTSSGAVRVIVQHPETVGSGPQLFQTFTVHRSPVTKIMLSEKHLVSVCADNNHVRTWTVTRFRGMISTQPGSTPLASFKILSLEETESHGSYSSGNDIGPFGERDDQQVFIQKVVPITNKLFVRLSSTGKRICEIQAVDCTTISSFTVRECEGSSRMGSRPRRYLFTGHTNGSIQMWDLTTAMDMVNKSEDKDVGGPTEEELLKLLDQCDLSTSRCATPNISPATSVVQHSHLRESNSSLQLQHHDTTHEAATYGSMRPYRESPLLARARRTESFHSYRDFQTINLNRNVERAVPENGNLGPIQAEVKGATGECNISERKSPGVEIKSLRELDSGLEVHKIAEGFSESKKRSSEDENENKIEFRKKGGFEGGGFLGRKKVPYLASSPSTSDGGTDSPGTASPSPTKTTPSPRHKKSDSSGQEYSL 815
2 -50.900[R] KOG2715 Uncharacterized conserved protein, contains BTB/POZ domain  ali follow..  36  28.CSAGLGALAQRPGSVSKWVRLNVGGTYFLTTRQTLCRDPKSFLYRLCQADLDSDKDETGAYLIDRDPTYFGPVLNYLRHGKLVINDLAEEGVLEEAEFYNITSLIKLVKDKIRERDSKTSQV.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 152
3 -50.400[P] KOG2716 Polymerase delta-interacting protein PDIP1 and related proteins, contain BTB/POZ domain  ali follow..  36  2................SEAVKLDVGGTIFKTSKSTLTKFD-GFFRTMLGSGIGLNVDESGCIFIDRSPKHFDLILNFMRDGCLALPKRDLTELMAEAQYYLLDGLIDRLASSNWSVESDEKTINVAKRLPILENNSQ...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 123
4 -50.300[R] KOG2723 Uncharacterized conserved protein, contains BTB/POZ domain  ali follow..  31  40.LAAQGIPLPAQLTKSNAPVHIDVGSHMYTSSLATLTKYPDSRISRLFNGTEPIVLDSKQHYFIDRDGEIFRYVLSFLRTSKLLLPDKDFSLLYEEARYYQLQPMVRELERWQQEQEQRRRSR.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 164
5 -27.200[R] KOG3840 Uncharaterized conserved protein, contains BTB/POZ domain  ali follow..  22  119.LGGRQGNTVDCSPGEGDKVCLLVDQTRFLVSQRLLTSKPDTMLGRMFSMRASVSPNERDEFEVADGSSCFRAILDYYQSGTMRCPSVSVSELREACDYLLVPFNAQTVKCQNLHALLHELSN.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 251
6 -20.600[P] KOG3713 Voltage-gated K+ channel KCNB/KCNC  ali follow..  17  7.RSLPEPGSQSSAASDDIEIVVNVGGVRQVLYGDLLSQYPETRLAELINCLAGGYDTGKREFYFDRDPDAFKCVIEVYYFGEVHMKGICPICFKNEMDFWKVDLKFLDDCCKSHLSEKREELE.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 139
7 -18.600[P] KOG4390 Voltage-gated A-type K+ channel KCND  ali follow..  14  25.GPMPAPPRQERKRTQDALIVLNVSGTRFQTWQDTLERYPDTLLGSS--ERDFFYHPETQQYFFDRDPDIFRHILNFYRTGKLHYPHECISAYDEELAFFGLIPEIIGDCCYEEYKDRRRENAERLQDDADTDTAGESALPTMTAR--------------------------QRVWRAFENPHTSTMALVFYYVTGFFIAVSVIANVVETVPCGSSPGHIKE------------------------------------------LPCGERYAVAFFCLDTACVMIF--------------------TVEYLLRLAAAPSRYRFVRSVMSI-----------------------------------DVVAILPYY----------------------IGLVMTDNEDVSGAFVTLRVFRV------------------------FRIFKFSRHSQGLRI--GYTLKSCASELGFLLFSLTMAIIIFATVMFYAEKGSSASKFTS-IPAA--VTMTTLGYGD------MVPKTIAGKIFGSICS-------------LSGVLVIALPVPVIVSNFSRIYHQNQRADKRRAQKKARLARIRAAKSGSANAYMQSKRNGLLSNQLQSSEDEQAFVSKSGSSFETQHHHLL-----------HCLEKTTNHEFVDEQVFEESCMEVATVNRPSSHSPSLSSQQGVTSTCCSRRHKKTFRIPNANVSGSHQGSIQELSTIQIRCVERTPLSNSRSSLNAKME-----------ECVKLNCEQPYVTTAIISIPTPPVTTPEGDDRPESPEYSGGNIVRVS. 628
8 -9.620[R] KOG0274 Cdc4 and related F-box and WD-40 proteins  ali follow..  10  175.............................................................................................................................................................................................................................................................................................................................LSTMTLGKQIFGFGFMDGRVGVILMSRQAETPR-----KFRYCLDSHADSVTCIDA--LTGDLPPTGEIGMVTGSDDGSVHC---------KTGVSLQSFQFRSSQILSLCFRPKYMLLVDTFNYELNSYQLYLIPGYARSRKNEQPILLSSRKCVRVLSKSTPGRGARLLAVGDENGLVYVVTRTEDPNKAIL------------TITAYSNFPITDIYLNE------------VAMVVGSASGYCGVYDTVTG------------------NFLKKIASARNAARREPINCILLDSNPLSLKGVITMSKHVKSWSYTIPKPFVNKRSKVLPLRP-----SVTHDNLSKSSDYSKNEVEREIML-------------------GLDQIAQERREKMEARQKFEQHFGEEEEIIAYVTMLSQEEEAKRMVQLSMDVDK--------------------EEDFKENDEQATSSLNALSSNHEPPQEQANVAELNEQEQI 651
9 -9.450[R] KOG2321 WD40 repeat protein  ali follow..  8  76.........................................................................................................................................................................................................................................................................................................PHIKVFDFAEMSLKFEENVQFEILSDDWTKSVHLQTDRTVDFHSQGGIHYSTRIPKYGRDLKYHYPNCDLYLA----------AAGDEVYRLNLEQGRFLNPLKIESAQI----------DSPTGGVNVIDINMHQLLAFGTDAGSVEFWDPRDRSRVGILEIPSTVPSTPYSDNSRSVTALKYRNDGLNVAIGLSDGATLLY---------------LRSSSPYMSKDQGYSMPIKSLHWMDSALDGTA-------RVLSADSKIIKIWEKDTG------------------KPFSSIEPTVELNDVCPIEGTGLILTANEGSPMHAFYIPSLNPAPRWCSFLDNITEEMEENPAPTIYDDYKFVTKKELLNLGLDHLVGTGVIRAYMHGFFNNLYEKARLIANPFSYEEHRQKIVKERLEKQRASKIRSQNRPKVNAGLASRLSYQENKLRKKTGVT---DGPSILEDERFKNVFTDKEEVDEDTLEYKQLHPSRSEARGLTAAEESEEEKEH... 537
10 -9.110[S] KOG3881 Uncharacterized conserved protein  ali follow..  9  16.................................................................................................................................................................................................................................................................................................RALTFDSLGLIKVTEARGQERGIPTVVN--DDRLRNPLLAVARKDGNVEVINPCNGDLHFS----VFGDDGCSPEDNEISALHLFRKKIDDQTERSCTLLTCTKKGDVSL--DAHGNSTDDASPKTWKACGSGEILVGKVDSENFSLFGGKRVEANIWDLEQCTKIWSAKCPPKNNLGIFTPTWFTSATFLSKDDHRKFVTGTKSHQVRLY---------------ISTQRRPVLSFDFRETAITSIAEDP----------DGHTIYVGNASADLASFDIRTIRSVVRHPQHQVIASCGLDRYLRVYD--------------VKTRQLISAVFLKQHLTGLVFDSGFSGEETAVANTVAEAATEEKMTIMDQEDDET--EKAPVKRKKSKKEKRSREIVFEGEDDEENEDEIEKAPVKTKKSKKEKRSREKVSEGEEKDELRSKKTREHKKKTKIVKHNQE................................................................. 467
FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Reed JC, Doctor K, Rojas A, Zapata JM, Stehlik C, Fiorentino L, Damiano J, Roth W, Matsuzawa S, Newman R, Takayama S, Marusawa H, Xu F, Salvesen G, Godzik A.; RIKEN GER Group; GSL Members. Comparative analysis of apoptosis and inflammation genes of mice and humans. Genome Res. 2003 Jun;13(6B):1376-88.