FFAS03 results for KOG2887

Query: [U] KOG2887 Membrane protein involved in ER to Golgi transport, from VFDB

Results of FFAS03 search in VFDB
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.

						`. 10 . 20 . 30 . 40 . 50 . 60 . 70 . 80 . 90 . 100 . 110 . 120 . 130 . 140 . 150 . 160 . 170 . 180 . 190 . 200 . 210 . 220 . 230`
#	Score	Template	Links and tools	%id	First	`MEKMAKGWFPMSGTSSSGDQQQQPLQTGGTSLLADWNSYAASRDFEEDTGTLGFDIESAVRSANDTVSGTFNVVSKGVRDNLQSATSSMPSGKALMYFGLLLASGVFFIFIAFTMFLPVMVLMPQKFAICFTLGCGFIIGSFFALRGPQNQLAHMSSAERLPLTLGFIATMVGTIYVSMVLHSYILSVIFSALQVIALAYYCISYFPGGSSGMKFLSSTLTSSVFRMFGR`	Last
1	-101.000	`[U] KOG2887 Membrane protein involved in ER to Golgi transport`	`ali`	100	1	`MEKMAKGWFPMSGTSSSGDQQQQPLQTGGTSLLADWNSYAASRDFEEDTGTLGFDIESAVRSANDTVSGTFNVVSKGVRDNLQSATSSMPSGKALMYFGLLLASGVFFIFIAFTMFLPVMVLMPQKFAICFTLGCGFIIGSFFALRGPQNQLAHMSSAERLPLTLGFIATMVGTIYVSMVLHSYILSVIFSALQVIALAYYCISYFPGGSSGMKFLSSTLTSSVFRMFGR`	230
2	-84.600	`[U] COG5102 Membrane protein involved in ER to Golgi transport`	`ali follow..`	23	2	`............................EGSFQSRLQSIIQRTGETTAESTNSWYNRLRTSMPWSNDYTEIPTNASGGNSYFQSSEFSLSRWERYMLFGICLLGSLACYAIACFMF-PVLVLKPRKFVLLWTMGSLLAVLGFAIVQGFVAHFRQLTTMERLPITLSYFVTLLATIIATIKIKSTILSIVFGVLHILSFVAYLIAFFPFGTRTVSLGTRMASRSLSNWL..`	200
3	-19.300	`[U] COG5120 Membrane protein involved in Golgi transport`	`ali follow..`	14	3	`........................................................................................LSDLQKI---VGTTALGFLFMIMGIFMFFD---------GPLLSLGNLLLVFGFFMIAGFSKSVSFFLRKDRMLGSISFFSGLLLTLF----------PIIGFFVECLGFFNLFKVFYPLIISFLRTV..............`	111
4	-19.200	`[P] KOG1743 Ferric reductase-like proteins`	`ali follow..`	10	3	`........................................................................................LTEAQKF---VAFTFGGFLFFLFGIFTFFD---------RALLALGNILFLIGVFLIIGSQKTYIFFTRPNKRRGSLFFLVGAFLILL----------TFLGFIIESLGIIGLFGDFFGVIVQFLRSM..............`	111
5	-9.030	`[S] COG5658 Predicted integral membrane protein`	`ali follow..`	7	118	`...............................................................................................................................AFMFVVAAYIQYSKKLFKFLTMI--AWSRNLLRKITTVTLNIAGTICFILALFMRNDPSYLMLAMLMTMCVIVVGSGVY........................`	200
6	-8.910	`[S] KOG4200 Uncharacterized conserved protein`	`ali follow..`	7	14	`LESCEKRSTVGENDELEVSLVDFETIEIDVDVTDSANSSIDSISEKGEDFEVIDSCTDTEKNMGENDSGRVDPFTVTTLNDERGEIYTGPEYTSTDWSLTSLVIRSIEFQVSLMITFIRFPPWLISKCLSFVFDPYRTMGRRYLVSWIVGLCDSGLKDDKPVLELVR--RVTWGLFCAVYVGIMLFALLVSAFMISGFVITYLAHEP.......................`	220
7	-8.500	`[T] KOG2174 Leptin receptor gene-related protein`	`ali follow..`	11	1	`........................................................................................MAGIKALISLSFGGAIGLMFLMLGCALYWPLFVL------FFYILSPIPYCIARRLVDDTDAMSNACKELAIFLTTGIVVSAFGLPIVFAIEWGACALVLTGNTVIFATILGFFLVF.........................`	120
8	-8.180	`[U] COG1314 Preprotein translocase subunit SecG`	`ali follow..`	22	6	`.........................................................................................................LVVFLIVAIGLVGLIMLQQGKGA---DMGASFGAGASATLFGSSGSGNFMTRMTAVLATLFFIISLVLGNINS....................................................`	75
9	-8.040	`[S] COG1755 Uncharacterized protein conserved in bacteria`	`ali follow..`	15	70	`..............................................................................................................WSAIPFAWFLFAQILRLWALSSLGRIMILPDANVIAGPYRYIKH-----------NYAVVIIEIAMLPLFFKAYVTAFLFSLLNAIVLLQAATNYTPK......................`	183
10	-7.910	`[E] COG1687 Predicted branched-chain amino acid permeases (azaleucine resistance)`	`ali follow..`	14	6	`...................................................................................................QIITIGICIVAVQFTRLLPFFVFPVNR-QYIRYLGKVLPPAMFGMLV----YCYKNIEILTGYHGIPDLLAGIVVLGLHFWKKNMFLSIAVGTLFYMALVQLIF...........................`	108

FFAS is supported by the NIH grant R01-GM087218-01

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