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Query: [P] KOG3574 Acetyl-CoA transporter, from VFDB

Results of FFAS03 search in VFDB
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MSPTISHKDSSRQRRPGNFSHSLDMKSGPLPPGGWDDSHLDSAGREGDREALLGDTGTGDFLKAPQSFRAELSSILLLLFLYVLQGIPLGLAGSIPLILQSKNVSYTDQAFFSFVFWPFSLKLLWAPLVDAVYVKNFGRRKSWLVPTQYILGLFMIYLSTQVDRLLGNTDDRTPDVIALTVAFFLFEFLAATQDIAVDGWALTMLSRENVGYASTCNSVGQTAGYFLGNVLFLALESADFCNKYLRFQPQPRGIVTLSDFLFFWGTVFLITTTLVALLKKENEVSVVKEETQGITDTYKLLFAIIKMPAVLTFCLLILTAKIGFSAADAVTGLKLVEEGVPKEHLALLAVPMVPLQIILPLIISKYTAGPQPLNTFYKAMPYRLLLGLEYALLVWWTPKVEHQGGFPIYYYIVVLLSYALHQVTVYSMYVSIMAFNAKVSDPLIGGTYMTLLNTVSNLGGNWPSTVALWLVDPLTVKECVGASNQNCRTPDAVELCKKLGGSCVTALDGYYVESIICVFIGFGWWFFLGPKFKKLQDEGSSSWKCKRNNLast
1 -148.000[P] KOG3574 Acetyl-CoA transporter  ali  100  1MSPTISHKDSSRQRRPGNFSHSLDMKSGPLPPGGWDDSHLDSAGREGDREALLGDTGTGDFLKAPQSFRAELSSILLLLFLYVLQGIPLGLAGSIPLILQSKNVSYTDQAFFSFVFWPFSLKLLWAPLVDAVYVKNFGRRKSWLVPTQYILGLFMIYLSTQVDRLLGNTDDRTPDVIALTVAFFLFEFLAATQDIAVDGWALTMLSRENVGYASTCNSVGQTAGYFLGNVLFLALESADFCNKYLRFQPQPRGIVTLSDFLFFWGTVFLITTTLVALLKKENEVSVVKEETQGITDTYKLLFAIIKMPAVLTFCLLILTAKIGFSAADAVTGLKLVEEGVPKEHLALLAVPMVPLQIILPLIISKYTAGPQPLNTFYKAMPYRLLLGLEYALLVWWTPKVEHQGGFPIYYYIVVLLSYALHQVTVYSMYVSIMAFNAKVSDPLIGGTYMTLLNTVSNLGGNWPSTVALWLVDPLTVKECVGASNQNCRTPDAVELCKKLGGSCVTALDGYYVESIICVFIGFGWWFFLGPKFKKLQDEGSSSWKCKRNN 549
2 -30.300[G] KOG4686 Predicted sugar transporter  ali follow..  9  2.....................AREDEERIVDNEEVSRPTEEDQVVSRAGRRDNELSLPSGGCCMPSSTSHRFMALVFMCLLGFGSYFCYDAPGALQNYFKKDNLTSAQFTIYSIYSWPNVVCFVGGFLIDRL-----FGIRLGTIIYMMILLVGQLIFACGG----------LDAFWMMILGRFIFGIGAESLAVAQNSYAVLWFKGKELNMVFGLQLSVARFGSTVNFWVMQPIYEYVSNFYKGHTALGVVLLLATLTCVM------SMTCALILGWMDKRAERILQRNNNPAGQIPKLTDVFSFKPPFWMVSIICVAYYVAIFPFIALGQNFFVDRGLSPAEANTVDSLVYLIAAVSSPVFG-FIIDKLGRNVTWVFTATLTTIGAHALLTFTQLTP---------------YVGMIIMGLSYSMLAASLWPLVALIIPEYQLGTAYGFCQSIQNLGLAVITIVAGIIVDHSGGEHMWLQLF-------------------------FMGWLTIALISTGVIWAYNNKNRGNLNMTPQQRAQFVSAE 472
3 -27.700[G] COG2271 Sugar phosphate permease  ali follow..  11  6.................................................KPAPHKARLPAAEIDPTYRRLRWQIFLGIFFGYAAYYLVRKNFALAMPYLVEQGFSRGDLGFASGISIAYGFKFIMGSVSDRS-----NPRV-FLPAGLILAAAVMLFMGFVPWA--------TSSIAVMFVLLFLCGWFQGMGWPPCGRTMVHWWSQKERGGIVSVWNCAHNVGGGIPPLLFLLGMAWFNWHAALYMPAFCAILVALFAFAMMRDTPQSCGLPPIEEYKNDYPDDYNEKAEQELTAKQIFMQYVLPNKLLWYIAIANVFVYLLRYGILDWSPTYLKEKHFALDKSSWAYFLY--YAGIPGTLLCGWMSDKVFRGNRGATGVFFMTLVTIATIVYWMNPA---------GNPTVDMICMIVIGFLIYGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAAAIVGYTVDFFGWDGG------------------------------FMVMIGGSILAVILLIVVMIGEKRRHEQLLQER....... 449
4 -27.100[U] KOG3764 Vesicular amine transporter  ali follow..  10  62........................................TARPVHTASISDSFQSIFSYYDNSTMVTGNATRDLTLHQTATQHMVTNASAVPSCPSEDKDLLNENVQVGL--LFASKATVQLITNPFIGLL-TNRIGYPI--IFAGFCIMFVSTIMFAF------------SSSYAFLLIARSLQGIGSSCSSVAGMGMLASVYTDDEMGIALGGLAMGVLVGPPFGS----VLYEFVGKTAPFLVLAALVLLDGAIQLFVL-----------------------QPSRVQPESQKGTPLTTLLKDPYILIAAGSICFANMGIAMLEPALPIWMMETCSRKWQLGVAFLPASISYLIGTNIFGI-LAHKMGRWLCALLGMIIVGVSILCIPFA--------------KNIYGLIAPNFGVGFAIGMVDSSMMPIMGYLVDVSVYGSVYAIADVAFCMGYAIGPSAGGAIAKAIGFPWL------------------------------MTIIGIIDILFAPLCFFLRSPPAKEEKMAILMD....... 485
5 -25.700[R] KOG3762 Predicted transporter  ali follow..  9  2.......................................................ENHVGERTVNIFGKVFPRDAFICRLFYLS--FPL-----LAVYFKQLGMTAAQAGFLIGSRVEFLSGPFWSQFASRF-----RKQKLLLLFSLGSLVLFTLGIGLVQPTRVYRQPAVEQAFMLLLILICLCEFFSAPALPLADAATLHSVRDNPAEFGKI--SVGWGFAMFIMGIALDYSDTFRNYTLCFVMCVIFMLAAMGLASKFKFDDDVPAPGESHVVAEKARARITQSEGGGGSENSLLLAMKALASMHILLFFVSVVVMGGGAGLVFSFLYWHLQDIGGSPVLFG-ILSVVNHASEIITYFYVFKLINKYGHVRVMYLCLAVNFFRFMALSIL--------------DNPWMVLPLQILQGACLATVWSCASSYISLVAPPHAKQHAQYALQVGHGIGKGLGSIIGGSVISIIGTRTTFVIYGLICLATCAGSFGLN................................................... 559
6 -25.600[R] KOG2563 Permease of the major facilitator superfamily  ali follow..  9  2...........................GADDGAISADKVDIRLQPLNKNGAQDETDEEAADQIQLRVYKQRWIVLLAVALLNNTNTMSWIGYAPSGNYVNSF-YGESSAAWLSMV---YMMCTIPVGMFAMWAGREWGLRTAVLIAGWANGIGAVIRVISSLDFV-----PQDLRFPICMTGQGIAAIAYPFIMFLPTKVAGSWFPDTQRAIATSIGVMSNPLGVLMANLISPAIVKSPEHVIWLNIFTCVPSLIAMLIATF-------------GVNRSEPKIPPTFSASKPQMDFVSGMKSCFSSKQYIILLIVMGGGIGMFNCLYTVMLELLCPSGYSNFFSGVCAALMIVGGVFGAAASSIFVDRTKLYEETLKIALGAAVIFGLIFLQLTLHQG----------YSVILGVTCLLFGVLGLATYPIGLELASECTFPVSEATSTGLIVLSGQIQSVIYVFIMKNFARPLQPDRMHIQVCQLTPDDTINTP--------KDNTMSIMIFSLLATLLVLTLVVLFKPVYKRLEAERGNRATADKAK 483
7 -24.300[G] COG2814 Arabinose efflux permease  ali follow..  13  2...............................................TANVTTVPQDDSETPNEAPAQVASWSGVFAMSVCAFALIA-FLPVSLLTPMARDLQVTEGMTGGIAISGAFAVLSLFISALAGSL------NRKTLLLGLTLAMGVSGAIVAL------------APNYAIYMLGRALIGVVVGGFWSMSAATAIRMVPKRDVPRALAIVNGGNALATVVAAPMGAYLSTVIGWRGAFLCLVPVSLIALAWQWKTL--------------------PSMPAAARAPGIGQVFKVFTLFKHPGVVVGMLASSLLFMGQFGLFTYVRPFLETVNVHGATISLFLLVLG-AAGFIGTVLIGRVLQRSFYQTMIVIPVLMALTALALIAF--------------GSSVAIVLVLLALWGLTGTSAPVGWWAWIAKVF-PKDAEAGGGLFVAVVQMSIALGSTVGGILFDHSGYRTTFVASAVLLAICAVL........................................................ 397
8 -23.400[G] COG2211 Na+/melibiose symporter and related transporters  ali follow..  9  16..................................................................................FGKDFAIGIVYMYLMYYYTDGLSVGLVGTLFLVARIWINDPIMGWIVNATRS-RWGKFKPWILIGTLTNSLVLFLL------FSAHLFEGTAQVVFVCVTYILWGMTYTIMDIPFWSLVPTITLDREREQLVPFPRFFASLAGFVTAGITLPFVSYVG-GFGFQMFTLVLIAFFIASTIV-----------TLRNVHEVYSSDNGVTAGRPHLTLKTIVGLIYKNDQLSCLLGMALAYNIASNIINGFA-IYYFTYVIGDADLFPYYLSYAGAANLLTLIVFPRLVKMLSRRILWAGASVMPVLSCAGLFAMALADI---------HNAALIVAAGIFLNIGTALFWVLQVIMVADTVDIRCESIAYSVQTMVVKGGSAFAAFFIALVLGLIGYTPNVAQSAQTLQGMQFIMIVLPV------------LFFMMTLVLYFRYYRLNGDMLRKIQI............ 445
9 -22.900[R] KOG2325 Predicted transporter/transmembrane protein  ali follow..  7  1.......................................MEVPTDSPIVHDGILLEKEQLMNKDKDDRLTNWRLIITAAVVSCLNAVENSVLIGEWPYMREIDPNATAQ-FFGLATSASKCHAVFALIFSIW-SYKTSSVKIPLIASRLIAIAACMIYLTIE---------KTDKRYVLMAVYTLLGIANSGGTVL--GYVTLCSSNEDRPRAFAALGLSFIFSIIVGPTIQLIFSA--GIWFHLYSAPIWISFILTILTVFVILILIEDISREKKTKLRPSESQSSFSMERWRSLYEKLKKSNLDWKLIVVCFFVRMAVSFSHSTLSTIGSILYMVMGWDGATTVRVGSITMVIFGVMSSTILLLYIFCHFGKILPQHKVFLFFTIAFGAVYIITYPFEFTSNPVAKYNMLYLSVTILVAGMSIPIMSTALDTVYSRILGNIDQSVAHGAMAVIDDILYMITPIFTTTMFTLYGIGPLWIVKSMAFGIIALTVLV..................................................... 481
10 -22.200[P] COG2223 Nitrate/nitrite transporter  ali follow..  10  2......................................SHLSAPERATGAVITEWRPEDPAFWQQRGHRVASRNLWISVPCLLLAFCVWMLFSAVAVNLPKVGFNFTTDQLFMLTALPSVLRVPYSFMVPLF-----GGRR--------WTAFSTGILIVPCVWLGFAVQDTSTPFSTFIIISLLCGFAGANFASSM-ANISFFFPKQKQGGALGLNGGLGNMGVSVMQLVAPLVVSLSIFAAFGSHGVEQPDGSQLYLANA-------AWIWVPFLAIFTLAAWFGMNELATSKASLKEQLPVLKRGHLWIMSLLYLATFGSFIGFSAGFAMLSKTQ-FPDVQILHYAFFGPFIGALA--SAGGAISDRLGGTRVTLINFVLMAIFSGLLFLTLPTGGVGG-------SFIAFYGVFLALFLTAGLGSGSTFQMISVIFRKLTMAAALGFISAIGAIGGFFIPKAFGSSLALTG-----------------------------SPVGAMKVFLIFYIACVVIWAVYGRHSKNK............... 464
11 -20.800[R] KOG2816 Predicted transporter ADD1 (major facilitator superfamily)  ali follow..  11  1..................................................................MEVFRLGELRHLLVTVFLSGLAEYLIRVMTDVTVAASLAVYLTGVQQVTV---MGTMVMMPVIGNL-SDRYG-IKAMLTLPMCLSVLPPAILGYRRD-------------TNFFYAFYVIKTLFDMAKNVHGTKRISMF-----GILAGVSSISGVCASLSAR--FLSIASTFQVAAISLFIGLVYMRVFLKERL-----------------QDADDDDEADSGGCRSHQEVHNGGDLKMLTEPILRDAPTKTHVFNSKYSSWKDMYFLKARGFNKNDFAELFLLVTIIGSISQLFILPTLSSTIGERKVLSTGLLMEFFNATCLSVA---------------WSPWVPYAMTMLVPGAMFVMPSVCGIASRQVGSSEQGKVQGCISGVRAFAQVVAPFVYSPLTALF........................................................................... 363
12 -20.700[G] COG0738 Fucose permease  ali follow..  10  2...................................................ATSIPTNNPLHTETSSQKNYGFALTSLTLLFFMSGFITCLNDILIPHLKNVQLNYTQSMLIQFC---FFGAYFIVSLPAGQLVKRISYKCGIVVGLIVAAIGCALFIPAAS----------YRVYALFLGALFVLASGVTILQVAANPYVTIL-AASRLTLTQAFNSLGTTVAPVFGAVLILSAATDATVNAEADAVRFPYLLLALAFTVL---------------AIIFAILKPPDVQEDEPALSDKKEGSAWQYRHLVLGAIGIFVYVGAEVSVGSFLVNFLSDPGLSETDAAHHVAYF--GGAMVGRFIGSAAMRYIDDGKALAFNAFVAIILLFITVAT-----------------HIAMWSVLAIGLFNSIMFPTIFSLALHGLGSHTSQG--SGILCLAIVGGAIVPLIQGALADAIGIHLAFLMPIICYA............................................................. 400
13 -20.500[G] KOG0637 Sucrose transporter and related proteins  ali follow..  11  1.........................................MGALEAERAANNATALETQSSPEDLGQPSPLRKIISVASIAA--GVQFGWASLLTPYIQLLGIPHKWSSYMWLCG-PIS--MIVQPIVDRCES-RFGRRRPFIAAGVALVAVSVFLIGFAADMGHSFGDKLENKVRTRAIIIFLTGFWFL--DVANNAFLADLAAGDAKACFSFFMAVGNVLGYAAGSYTNLHKMFPFTMTKACDIYCANLKTCFFLSITLL--LIVTFSSLWYVKDKQWSPPQGDKEEKTSSLFFFGEIFGAVRHRPMVMLLIVTVINWIAWFPFILYDTDWMGREVYGGNQAGALGLMFNSILLGFVSLGVESIGRKMGGAKRLWGCVNFILAIGLAMTVLVHREIAGPLAGPSSGIKAGVFSLFTVLGIPLAITYSIPFALASIFNSGAGQGLSLGVLNIAICIPQMIVSFSSGPLDAQFGGGNLPSF................................................................... 477
14 -19.600[P] COG2807 Cyanate permease  ali follow..  11  3................................................................CSTSLSGKNRIVLIAGILMIA---TGAAPLLDTIRSAYSLTTAQTGLLTLPLLAFALISPLAAPV----ARRFGMERS-LFAALLLICAGIAIRSL-------------PSPYLLFGGTAVIGGGIALGNVLLPGL-IKRDFPHSVARLTGAYSLTMGAAAALGSAMVVPLALNGFGWQGALLMLMCFPLLALFLWL---------------------PQWRSQQHANLSTSRALHTRGIWRSPLAWQVTLFLGINSLVYYVIIGWLPAILISHGYSEAQAGSLHGLLQLAT-AAPGLLIPLFLHHVKDQRGIAAFVALMCAVGAVGLCFM--------------PAHAITWTLLFGFGSGATMILGLTFIGLRASSAHQAAALSGMAQSVGYLLAACGPPLMGKIHDANGWSVPLMGVAILSL............................................................. 377
15 -19.200[G] KOG0569 Permease of the major facilitator superfamily  ali follow..  7  11..........................................................................IALCLSSGFQQGYIASVLNQPYAQIEQ---DSTLHLLWSLLNVCFPIATIFGQFLAGWMCSQFGRKHTALIASFLYIPGALLCAA---------AKWCFPAFELLFVGRIIWSLANGVNTVNATVWIVECAPPQIRGRMAAMQEFFMALGSLLTQAVGVPFSTDELWPYNFLPNCAVVVVSMVMFSWVAESPQFIMESIGKNKEKKKTAGGIESEHSGMEIMFMPWRAKDQTSRLIRYCAWVGVMVKIGARSLRGYSTFILYTLSHFTYSQATWLSFATGLLRLPFTLVPVFLVDRLGRRPLIIVSMLVSFVSILVMIIAININGELKYAT-------FIGLTVLLLVNTCGIGSVSRF-YAAELVPRNLLLSSVSTLTMFEALTKIGVEFAFYPTANVIGAQSLLL----------------------------FLIPTGVFTV--MCYLMCPETSRMTVNEVL.......... 479
16 -19.200[P] KOG0252 Inorganic phosphate transporter  ali follow..  8  23.........................................................................TAIVIAGMFFTDAYDLFSISLVTKLLKPGTLPPNVAAAVNGVAFCGTLQLFFGWLGDK-----LGRKKVYGITLMLMVLCSLG-------SGLSFGHSANGVMATLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILAGGIVSLIVSADYVWRIVLMFGAIPALLTYYWRMKMPETARYTALIAEEEAQSNSNSSNPNFTFGLFTREFARRHGLHLLGTTTTWFLLDIAYYSSNLFQKDIYTAIETMNAIHEVFTVSKAQTLIALCGTVPGYWFTVAFIDILGRFFIQLMGFIFMTIFMFALAIPY------DHWRHRENRIGFLIMYSLTMFFANFGPNATTFVVPAEIFPARLRSTCHGISAASGKAGAIVGAFGFLYAAQSSDSEK------------------TDAGYPPGIGVRNSLLMLACVNFLGIVFTLLVPES-KSLEEIS.......... 516
17 -19.000[R] KOG2615 Permease of the major facilitator superfamily  ali follow..  10  10.......................................................................FWELFTVWIIVLCTALPISLFPFLYFMIDDFNIAKEDIGFYAFVGCSFMLSVAWGLVADRY-----G-RKPVILIGTASVVVFNTLFGL------------SLNFWMAIITRFCLGSFNGLLGP-IKAYAMEIFRDEYQGLALSAVSTAWGIGLIIGPAIGGFLAQPAK---FFLPCLAISVFAFLVTIVSSRIPETLHNHKFNDDESYDALKDLSDDPESNKVAERNGKSSLLNNWPLISSIIVYCVFSLHDMAYTEIFSLWANSLGYSTADVGSVLAFSGFGLLIFQLSLYSYAERLLGPIIVTRISGSLAMVVLSCYPLIAKLSGLAL--------TVTVTSASVAKSVLGTSAITGLFILQNKAVRQDQRGAANGIAMTAMSLFKAIGPAAAGII............................................................................... 409
18 -18.000[R] COG2270 Permeases of the major facilitator superfamily  ali follow..  12  35..........................................................................TTFIFGPYFVARLTDDPISAQATWSNMATVS----SIIIALFSP-----ILGSIADQ------GARKPWIAFFAVIKIVSLFFLWFA---------APGSPIILPIICMILASIAAEFSIVFNDSMMPRLTNPQNVGRISN---LAWGLGY-LGGMVVLIAATGEDARITGPLAALWYLVFILPMF--------------LLTSDAEKGLPFAAAIRSGLGELKITLRELRYRPVLLRFLIARMLYQDGVNGVIILGGAFAAGFGWATMEI-GLFGILLNVVAIAGCFAAGRLDQKLGSRITILISLALLLLATVGIVSTIQLSTADNDRIFATGAEKAYLLYGVLIGLAFGPVQASSRSYLARNITVAEAGRYFGIYALSGRATSFMATLSFSIATTISGSAHI-------------------------------MATLIVFLGAGFLLLLRVP.................... 453
19 -17.400[E] COG3104 Dipeptide/tripeptide permease  ali follow..  9  2..........................................TVGASQQTSTIALHNDTGMLMSNLNIFKQPNAFYLIFSIEFWERFGFGMQAILTVYMVKIDESASFVLFGAFSALVYGFVAIGGWIGDKV----IGTKRA-ITLGAIVMMVGYVLLG------LSTADHPLVGPTLIYIAMGFITVGNGLFKANPSSLLAKIYPENDPRLDGAFTMMAINLGSFFSMIITPLVAIKMGYGMAFGVSAVGLAITVVNFLFCLRMLKGTGSPADLMPVNKMYLVLVAVGSIIASLVCSYLLMSGIERAKMLVAFILMLQGVVFFVLYFQMPTSLNFFAINNVEH-EQFQALNPFWIMIASPILAATYGKLGDKLAMPFKFAFGMALCALSFLVLSWGTLFANEQGI--ISSNWLIASYAFQSIGELLVSGLGLAMVAQLVPQRMMGFAMGMWFLTSASAAVIAGWVASLTSTPAN----------------------GATESLHIYGEVFAQIGYVTAGIAIVTFMIAPKLTRICRGESEPLELVTQ.. 514
20 -17.300[G] KOG4830 Predicted sugar transporter  ali follow..  8  1.............................................................MTGGSEEDPFTKPIGRWSVFFYGVGITASCWFTLLLFLTQIGLSPRDAAIVMLSG---VADAFATIFTDEYGLLRFGHFKIWHAAGSLLVAISFSSV-------------------FGGCLPCSILHNDSLTLETFSYSMFAAIF----NIGWAATQVANLGLYAIALVVFGVIKAGSKEDTETQYRWIAYSSITIGCCFV-------------VIFLMGTKEPRLRIDLKETSRARIPWVYWFRKILYYQVAMVYLLTRLVLNVSQAYLAFFVIDDLQMDQSAKALVPAIIYICSFVVSVLLQEIPWNGKRLKAYYTAGGIIWIFCGAAILLL-----------PRDISSFMYAISVFIGIANALMMVTAISMQSVLVGVGGCAFVCGSLSFLDKMSCGLALYVLQSHQTTSPRGQLNNNQQSVYLSVTRYGL----------------LVPALCSFVGVAVTFFMELEAAGSLSKPLLRDR..... 436
21 -17.100[R] KOG0254 Predicted transporter (major facilitator superfamily)  ali follow..  9  36...........................................................................LVATLITFCHGIALGWLSPMLPKLLSPQIDVNEASWLGAV---ISIGGISGNFSFSYLMNRFGRKVSIYALAVPHTSIEWLYVA------------------------VFAGLTGGGMFVVLPIFIGEIADNSIRGRLCSFFTLTMNTGIMVG----FVVSSHIAYHVIPCAVVGLPVLYVLLATRYPEPPQQLIRAYQKHFDEMRLAIQQQNNDTDDNGLSMSDFLTKRSLKALATGLVLMVANIFGTFAFNNYMSNIFDAVHTQLD--PNTNTIIIGAVQILGTLASIYLVDRYGRKILLIVSCAGSGIGTSAFGLYAFYAEEQKVDLSAFSAWLPVTLMAFIIFIANVGVISVTMVVLVEILPQKIRAVATSFCLGCLSFFAFASLKTFPLMMFHLGLAAT------------------------------MWFCAAVSVICLFYVVVCLEET-RSMYD............ 472
22 -16.700[S] KOG3097 Predicted membrane protein  ali follow..  6  5....................................TNAGFENDEPVKPKAGFEPDTASLREKVVLNPGEKWRILKNISIISIAFMVQFTAFQGTA--LQSSINAKDGLGTVSLSAI-YAALVVSCIFLPTLIIRKLTVKWTLVC----MLCYAPYIAFQLFP-----------RFYTLVPAGILVGMGAAPMWASKATYLTQV-VDAIIVRFFGFFFLAWQSAELWGNLISSLVLSSGAHGGGSSSNTTVSEEDLIYLSCIVAAVCIIAFFLDPLKRYGEKRKGSNSAAELSGLQLLSATFRQMKKPNLQLLIPITVFIGMEQAFIGADFTQAYVACALGVNKIGFVMICFGVVNALCSILFG-SVMKYIGRTPIIVLGAVVHFTLITVELFWRPNPD----------NPIIFYAMSGLWGVGDAVWQTQINGLYGLLFRRNKEAA-FSNYRLWESAGFVIAYAYATTLC-----------------------------------TQMKLYILLAVLTLGCIGYVIVEILYRKKQRKLKKQEKLEAAE 495
23 -16.100[C] COG3202 ATP/ADP translocase  ali follow..  7  19.................................................................PIEQYENKKFLPLAFMMFCILLNYSTLRSIGFVVTDIGTEISFLKTYIVLPSAVIAMIIYVKLCDIL------KQENVFYVITSFFLGYFALFAFVL-PNFKWFIKIVGKWSFASFYTIAELWGTMMLSLLFWQFANQITKIAEAKRFYSMFGLLANLALPVTSVVIGYFLHEKTQIVAEHLKFVPLFVIMITSSFLIILTYRWMNKNVLTDPRLYDPALVKEKKTKAKLSFIESLKMIFTSKYVGYIALLIIAYGVSVNLVESKVKELYPTKEAYTIYMGQFQFYQGWVAIAFMLIGSNILRKVSWLTAAMITPLMMFITGAAFFVIAMNLTGILASSPLTLAVMIGMIQNVLSKGVKYSLFDATKNMAYIPLDKDLRVKGQAAVEVIGGRLGKSGGAIIQSTFFILFPVFGF----------------------------EATPYFASIFFIIVILWIFAVKGLNKEYQVLVNKN....... 496
24 -15.600[R] KOG0253 Synaptic vesicle transporter SV2 (major facilitator superfamily)  ali follow..  12  42........................................................................................MLLSFVGPAVQSLWNLSARQESLITSVVFAGMLAYSWGIVSDKH-----GRRKGFIITAVVTFVAGFLSA--------------SPNYMWLIILRCLVGLGLGGGPVLA-SWYLEFIPAPSRGTWMVVFSAFWTVGTIFEASLAWLVMPRLGWRWLLAFSSVPSSLLLLFYRWTSESPRYLILQTHLLKAGESGEAVAVSKIVLKADKEPGFSLLALLSPTLMKRTLLLWVVFFGNAFAYYGVVLLTTELNNSHNRCYYRDVFIASFAEFPGLLISAAMVDRLGRKASMASMLFTCCIFLLPLLSH--------------QSPFITTVLLFGGRICISAAFTVVYIYAPEIYPTAVRTTGVGVGSSVGRIGGILCPLVAVGLVHGCHQT-------------------------------AVLLFEVVILVSGICVCLFLTDSISASKEPPSAS....... 499
25 -15.400[Q] KOG3626 Organic anion transporter  ali follow..  13  8..........................................................................LGLFSFVFFLEAIGGSYISAVQNIERQFQMSSRTSGFMISAS---------GYIPCVVFIAHFGNRARWIGAGAILVSITYLMLASLRAVIKDSKCKEQTSNSYPFLVFFFSLLLLGIGRTVPWSLGVPLLDDN-FGAISSIRVLGPICGYMIGSFCNKFYYTLNAWWMGFLFIGSIALFPSTMLFFFPQGKEGDGSAVQLRDVHKEKLKKSVDEDRTKLKDFAKSCKKVLSTKIYMGSVLGRVCDVLAFKGYIVFLPKYLNHFGIPQYLVHRYMAMFGVFGFGLGVATGGYVTKKLKLNMFVMLMSTLNVCLYSGKIFIGCESIVNSIGSNNRTSSVIFFLTVLPGSFVAGLGVVPAMLILLRSVPPETRSLSLGLQGMAVSLFGTLPSPILGLVIDA------------ACL--VWDKACNGARGSCSI-YHPMHLLYVVIRTVALITDVYVWKHAKNLNIMDEPV....... 723
26 -14.300[R] KOG0255 Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily)  ali follow..  13  33.EDETRKPENTDKKECKPDYDIECGPNRSCSESSTDSDSSGSQIEKNDPFRVDWNGPSDPENPQNWPLLKKSLVVFQIMLLTCVTYMGSSIYTGQEYIQEEFHVGHVVATLLSLYVLGYGLPIIFSPLSE---TARYGRLNLYMVTLFFFMIFQVGCAT-------------VHNIGGLIVMRFISGILCSPSLATGGGTVADIISPEMVPLVLGMWSAGAVAAPVLAPLLGAAMVDAKNWRFIFWLLMWLSAATFILLAFFFPETQHHNILYRRALKLRKETDREVDARTFLINTLYRPLKMIIKEPAILAFDLYIVAYGCFYLFFEAFPIVFVGIYHFSLVEVGLA------MGFCVGCVLAYGLFGTFTPEAFLIVAMCVCWCLPLSLFLFGWTAR---------VHWILPVISEVFFVLAVFNIFQATFAYLAT-CYPKYVASVFAGNGFCRASFACAFPLFGRAMYDNLATK........................................................................ 507
27 -13.500[G] KOG2532 Permease of the major facilitator superfamily  ali follow..  11  41................................................................................................................SLLFSGVAIGGLIGLVPSVPQISSIGLRNTQTISGFISGLGSFLF--------------VSVGFYTSFLCRVLQGIGAAVLFTAVGVVPGVWAPKSEANTFMSILACAFQLSNVICMPVSLLCESAVGWRSIYYISGAITFVLYTVFWFTYTDDPKLHRNVSQKELRKISTGKVEKIKEPV------PYFAVSTDPTVIISWISLFGGNMGFYVLCIYGPTYLRELKFDVKETGFLTALPFILSAIAKFSAGRIS----DKLTGLSERARFVFFASIFQIGLVAGLVVMAFTTNRVIAQIAFNFAIVSSGLIMGVVKFADLP-------KNLIFVNLPICQFAGSFREILYKIETLKVRCTLTVMSFTAYASQFLSPTLVSIICPNYTNE-------FLVISGLIVACNAGFPFLARS--------DAAGYTKKQEP 448
28 -13.500[S] KOG3098 Uncharacterized conserved protein  ali follow..  8  1MAPT------TRRYELLSAAVGYDSGFFDQEPTNLSGIENCAKAREMRQGTESASTIYLILYSAFMIILFNFSKFPKFYAVTNVILGQKMPKSFVLESVIHSKAIGKYAGYYGVMYIIYMIGCLFSPSI----LNEIGAKYILIC----AICFASFPLGFFFV-----------NSYYYYFSQMLLGFGYALYYQGHGGYLTSHSTRKTIESNINIAWCVGCICLLLSSGILATVTHMTLDSREIMQNLKNSTEFEPVERRFSDLEIKLLFGVFLGAGKDVTNCIQETKKKGTFMEGFKQTCSALTSKSMLQLFPLFTVLGTSSSFWLSIFTTAMNFTAANSNLAAIYPLSVGVGEIGTALFITQMSRRFKDFSLQPTMLIGAIFSILGFGLVHVSTPYDAPMRPTQGHSYLVISVIGVIVGIGDCCLNSCRSVICALAMPDRRAQA-FSISKLYQALGSCVLFFASPIIP-----------------------------------LYVYTIGVSIHLIIANVFFNITARRTQTMEK............ 516
29 -13.200[GEPR] COG0477 Permeases of the major facilitator superfamily  ali follow..  12  30........................................................................................YAAAAVLTQFFHSDDPLSNDLLSLSTLALAFFARPIGSALFGHF--DKIGRKKT-LVASLVLMGGSTVVIGLLPNYAQIGIWAP-----------ILLCVCRVGQGIGLGGVATENAPEGKRAWYGTFPQLGAPIGLFVANGTFFLVSYLLGHNALVE-IPFVSSILLVAVGLYVRLTLHESHVFVEAEQKGKKLNAPVSVVFTKHLKPMVIGTFIMVATYSLFYIMTAFAQAYSRTAPKLSEAGYALGLGIPANTFTGLLLISAIVFGIFISISG-FYADKIGRRKWLIWVTIAIGVLGLAMPLFL-----------ENGTPVSVFAFLVIGMAIMGMTFGPMAALLPELFPTEVRYSGASLAYNLASIGATIAAMISLKINASFGVMGVGIYLAINALMTFLALLASK................................................... 428
30 -10.800[E] KOG1237 H+/oligopeptide symporter  ali follow..  9  44.....................................................................................GWLQNLIVYLIEEYNMKSIAAAKI-LNIFSGFTFMFPAIGAIAADSF----FGTIPVILVSSFILVGVVLLALTTLFDSLRPQACETASQLGVLYTAITLGCVGAGGLRFTLATAGANQYEKTKQGSFFNWFFFTWYLAASISATAIVYAEENISWSFGFGLCVAANLLGLIVFISGK-SPFTSLLRVIFAAIRKRKAVVSTNEKDYHSESKKTPLCSVQQVEDFKAVIRIIPLVLLFLSTPIAMQLGLTVLQGLVMDR-GSLQVITLLSTCLFIIVNDRFLYPFYQKLTPIQRVGIGHVFNILSMAVTAIVEAFLGSSSVADMSVLWLFPPLVIVGIGEAFHFPGNVALCYQEFPESMRSTATSITSVLIGICFYTSTALIDLIQKTTAW----------------------PDDINHGRVDNVYWILVIGGVLNLGYFLVCSWFYKYRNLENADH....... 549
31 -10.700[H] KOG3810 Micronutrient transporters (folate transporter family)  ali follow..  9  4.............................................PGPVSRRAAAAAATVLLRTARVRRECWFLPTALLCAYFFASLPF-----LTPYLLGPDKNLTEREVFNEIYPVWTYSYLVLLFPVFLATDYLRYKPVVLLQGLSLIVTWFMLL--------------AQGLLAIQFLEFFYGIATAT-EIAYYSYIYSVVDLGMYQKVTSYCRSATLVGFTVGSVLGQILVSVAGWSLFSLNVISLTCVSVAFAVAWFLPMPQKSLFFHHIPSTCQRVNGIKVQNLLVLKVLWNDFLMCYSSRPLLCWSVWWALSTCGYFQVVNYTQGLWEKVM-PSRYAAIYNGGVEAVSTLLGAVAV-FAVGYIKISWSTWGEMTLSLFSLLIAAAVYIMDTVGNI-------WVCYASYVVFRIIYMLLITIATFQIAANLSMER-----YALVFGVNTFIALALQTLLTLIV-------------------------VDASGLGLEITTQFLIYASYFALIAVVFLA....................... 472
32 -10.300[G] KOG2533 Permease of the major facilitator superfamily  ali follow..  9  13.SVEENPKLNIPEIVESVSDSKPSLKNQFSTTVIDSSDLNVFNDGAETTVKEQEFTSSELRRLQKLRLKMDLRIIPCLWILYFLSCCLRFTVSLSFTMNTAQGHSLIQ---LALGLALFYVGYIIFEVPSNLMMAFIEPRI-WVSRIQLTIGVVGACHAVL--------GTKHGNAQSYVALRFFLGVAESGLWPGLAYYMSRWYRGKHLGKRIGWYYTAAQIAAAAVSLVSAGFQGLYGYQWMFLIWGVVAIAQALSIPWWLMKTLSPQRIGFLTPADKSLHSRYIAEMNVGKRWQWSDLLKSCLDLRVWPFILMYFGIVGVGNGIFNYCTLIIEEINPSFSGIISLLNAPIWLADALGIVTVMPLYDRFHKKFSFFTGSCLIIIAGLAVANYA---------PRAWSRYGGLLMIGFGLGPTVPICMAWCSASMAKTYGDVGVASSLALVTGLGNLGSVVTTYA................................................................................... 493
33 -10.100[R] KOG3880 Predicted small molecule transporter involved in cellular pH homeostasis (Batten disease protein in human)  ali follow..  9  1..................................................................MSDKSHQIYCYFWLFGLINNVLYVVILSAAVDIVGPTLPKSLVLLADIF--SLAIKLCSPFFIDRIKY----SYRIWSLITMSCLGMFLVSFK---------------NLFVCLLGISFASISSGFGEVTFLQLTHYYKQISLNGWSS-----GTGGAGIIGGASYMFLTSIFKVPVKLTLLVFSLLPFAFLFYFKLESNDTNLTYQSLQQIDEAEDDQLVPFPVAFTHTNASQ-VKRLRRLVFPYMVPLTTVYLFEYLINQAVAPTLLFPINGDERSKSMPFFFHKYTLYQLGVFISRSFGHLMRMRS-LYILAFLQGVNLCITVLQSWFYVTH--------SPWAVMILIFYEGFLGGASYVNTFLNILEQEDPDETEFAMGAVSIADSFGVFLAALLGLGLEPKL........................................................................... 393
34 -9.120[F] KOG1479 Nucleoside transporter  ali follow..  10  1MPGTSDTRRLVDALDEDDEILGTEGSFVPAFRPQDHHADEQCLMERQQDEVVLVSNEPES-------------GRLFTYLVFYLLGTPWNFFVTAEDYWKYK--TPLQKSFTCDLALTATISGTTFLLLNAIFGHHVSLRTK-MLGTLWMILILFGVTTGFV--EINTDTWQEQFFLITLIIVVLLNISAATMSGALYGVAGLFPSEFITAVVSGQALGGILTALAFILVLAFDTGPNTTAFIFFIVGGVLILLCIVCYVILARKPFFRYYLEGGDKYKVIRAVPSHNRNGSAEGLPLEPILRQVMSKIYLHAISLALLYTTTLSVYPAVTV--MQSEYGHSVWTAMMVMFALSNGYFTNILLIMAPKRVKQHEKELASSIMAAALSCGMAVG............................................................................................................................................................ 393
FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Jaroszewski L, Slabinski L, Wooley J, Deacon AM, Lesley SA, Wilson IA, Godzik A. Genome pool strategy for structural coverage of protein families. Structure. 2008 Nov 12;16(11):1659-67.