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Query: [K] KOG4109 Histone H3 (Lys4) methyltransferase complex, subunit CPS25/DPY-30, from VFDB

Results of FFAS03 search in VFDB
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
    .   10    .   20    .   30    .   40    .   50    .   60    .   70    .   80    .   90    .  100    .  110    .  120
# Score Template Links and tools%idFirst MADQTASAEVATEKMDTAEAPAAAPAASAAAPAEAESNENTTVPSNVLSANGGQQTGNQSAPRNTSTVPTRQYLDSTVVPILLQGLGALAKDRPENPIEFLANFLLREKDRYNAENQNPAGQQLast
1 -50.900[K] KOG4109 Histone H3 (Lys4) methyltransferase complex, subunit CPS25/DPY-30  ali  100  1MADQTASAEVATEKMDTAEAPAAAPAASAAAPAEAESNENTTVPSNVLSANGGQQTGNQSAPRNTSTVPTRQYLDSTVVPILLQGLGALAKDRPENPIEFLANFLLREKDRYNAENQNPAGQQ 123
2 -10.100[O] KOG2062 26S proteasome regulatory complex, subunit RPN2/PSMD1  ali follow..  10  819TVKAQARAKRAEREKASKGSNDDEMKIDKKTTEEKEATPMEMDEEKSQDISINGNSKKEEPKSETLENFTRPYINGRYYPVFTGGVLMLIDRESDKAPDLIELNRDAVPASADTEPGEQEAS. 952
3 -10.100[O] COG5116 26S proteasome regulatory complex component  ali follow..  10  819TVKAQARAKRAEREKASKGSNDDEMKIDKKTTEEKEATPMEMDEEKSQDISINGNSKKEEPKSETLENFTRPYINGRYYPVFTGGVLMLIDRESDKAPDLIELNRDAVPASADTEPGEQEAS. 952
4 -7.620[H] KOG3810 Micronutrient transporters (folate transporter family)  ali follow..  16  4..............................................PGPVSRRAAAAAATVLLRTARVRRECWFLPTALLCAYGFFASL---RPSEP--FLTPYLLGPDKNLTERE....... 68
5 -7.310[U] KOG1107 Membrane coat complex Retromer, subunit VPS35  ali follow..  26  107......................................................................RLYLLITVGVVILKDLVEMCR---QHPLRFLRNYLLQCTRNILPDEGEPTDEE 171
6 -7.270[S] COG4929 Uncharacterized membrane-anchored protein  ali follow..  16  29................................................................................LLAKGDIIILELAPVDPRSLMGDYM.................. 54
7 -7.150[S] COG4317 Uncharacterized protein conserved in bacteria  ali follow..  24  2................................................................LKGMTMKMYLLSLGAGLLVGVIYSLLNVRPAPPVIALVGLL.................. 43
8 -6.900[E] COG3579 Aminopeptidase C  ali follow..  20  400.....................................................................SDAWMDEYTYQIVVADELAAYEKEP-DPMGALAQY................... 445
9 -6.880[C] KOG4631 NADH:ubiquinone oxidoreductase, NDUFB3/B12 subunit  ali follow..  19  15......................................................................SIYSNFRDFPQLAQHEKRLAQIGLKDP--WIRNYVYLYDRKYPHVVGQ..... 60
10 -6.820[P] KOG3574 Acetyl-CoA transporter  ali follow..  8  1MSPTISHKDSSRQRRPGNFSHSLDMKSGPLPPGGWDDSHLDSAGREGDREALLGDTGTGDFLKAPQSFRAELYVLQGIPLGLAGSIPLILQSKSYTDQAFFS-FSLK................ 122
FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Friedberg I, Godzik A. Fragnostic: walking through protein structure space. Nucleic Acids Res. 2005 Jul 1;33(Web Server issue):W249-51.