|
|
|
current user: public |
|
| Query: gi|16082696|ref|NP_395142.1| secretion chaperone (YPCD1.05c) [Yersinia pestis CO92], from Y.pestis |
| . 10 . 20 . 30 . 40 . 50 . 60 . 70 . 80 . 90 . 100 . 110 . 120 . 130 | |||||||
| # | Score | Template | Links and tools | %id | First | MYSFEQAITQLFQQLSLSIPDTIEPVIGVKVGEFACHITEHPVGQILMFTLPSLDNNDEKETLLSHNIFSQDILKPILSWDEVGGHPVLWNRQPLNSLDNNSLYTQLEMLVQGAERLQTSSLISPPRSFS | Last |
| 1 | -5.950 | sp|O00213|APBB1_HUMAN Amyloid beta A4 precursor protein-binding family B member 1 OS=Homo sapiens GN=APBB1 PE=1 SV=2 | ali | 10 | 109 | ....VDVINGALESVLSSSSREQWTPSHVSVAPATLTILHQQTEAVLGECRVRFL-----------SFLAVGRDVHTFAFIMAAGPASFCCHMFWCEPNAASLSEAVQAACMLR--YQKCLDARSQASTS | 221 |
| 2 | -5.820 | sp|Q9UIF9|BAZ2A_HUMAN Bromodomain adjacent to zinc finger domain protein 2A OS=Homo sapiens GN=BAZ2A PE=1 SV=4 | ali | 7 | 2 | .....RLLKAALHDPGFPSYCQSLKILGEKVSEIPLTRDNVSE--LRCFLMAYGVEPALCDRLRTQPFQAQPP----------QQKAAVLAFLVHELNGSTLIINEIDKTLESMSSYRKNKWIVEGRLRR | 115 |
| 3 | -5.690 | sp|Q9H8H0|NOL11_HUMAN Nucleolar protein 11 OS=Homo sapiens GN=NOL11 PE=1 SV=1 | ali | 6 | 152 | .......................................................PRNCLMQLIQTHVLSYSLCPDLMELKKKDVQLLQLCLQQFPDIPESVTCACLKIFLSIGDDSLQETDVNMESVFD | 228 |
| 4 | -5.440 | sp|Q9UKN7|MYO15_HUMAN Myosin-XV OS=Homo sapiens GN=MYO15A PE=1 SV=2 | ali | 8 | 135 | ............................LAINHNGLNFLSTETHELMVKFPL--------KEIQSTRTQRPTANSSYPYVEIALGDVAAQRTLQLQLEQGLELCRVVAVHVENLLSAHEKRLTLPPSEIT | 228 |
| 5 | -5.270 | sp|Q969R8|ITFG2_HUMAN Integrin-alpha FG-GAP repeat-containing protein 2 OS=Homo sapiens GN=ITFG2 PE=2 SV=1 | ali follow.. | 9 | 300 | .............SVQVDHQLFALEKLDVTGNGHEEVVACAWDGQTYIIDHNRTVVRFQVDENIRA-ACKEGRNSPCLVYVTFNQKIYVYWEVQLERMESTNLVKLLETKPEYHSLLQELGVDPDDLPVT | 421 |
| 6 | -5.260 | sp|Q9GZR1|SENP6_HUMAN Sentrin-specific protease 6 OS=Homo sapiens GN=SENP6 PE=1 SV=2 | ali | 11 | 164 | ......IFCLDFIKIQLDEPDHDPVEIILNTSDLTKCEWCNVRKLPVVFLQAIPAVYQKLSIQLQMN----DCKGVNKLTNLEEQYIILIFQNGLDPPANMVFESIINEI.................... | 270 |
| 7 | -5.200 | sp|P50993|AT1A2_HUMAN Sodium/potassium-transporting ATPase subunit alpha-2 OS=Homo sapiens GN=ATP1A2 PE=1 SV=1 | ali | 8 | 1 | ..NFASIVTGVEEGRLIFDNLKKSIAYTLTSNIPEITP-------FLLFIIANIPLPLGTVTILCIDLGTDMVPAISLAYEAAESDIM.......................................... | 79 |
| 8 | -4.870 | sp|Q96RT7|GCP6_HUMAN Gamma-tubulin complex component 6 OS=Homo sapiens GN=TUBGCP6 PE=1 SV=3 | ali | 8 | 199 | .......................................................ECELVKDVL---NVLIGVVSATFSLCQPAQAFVVKRGVHVSGASPESISSLLSEVAEYGTCYTR........... | 259 |
| 9 | -4.850 | sp|O14576|DC1I1_HUMAN Cytoplasmic dynein 1 intermediate chain 1 OS=Homo sapiens GN=DYNC1I1 PE=1 SV=2 | ali | 10 | 93 | ...............................VHPALFACVDGMGRLDLWNLNNDTEVPTASVAIELNRVRWAQAGKEVAVGDSEGRIWVYDVGELAVPHNDEWTRFARTLVEIRANRADSEEEGTVELSA | 195 |
| 10 | -4.850 | sp|Q9Y4H2|IRS2_HUMAN Insulin receptor substrate 2 OS=Homo sapiens GN=IRS2 PE=1 SV=2 | ali | 11 | 42 | .AAYREVWQVNLKPKGLGQSKNLTGVYRLCLSARTIGFVKLNCEQPSVTLQLMNIRR-------SDSFFFIE-----VGRSAVTGPGELWMQAD----DSVVAQNIHETILEAMKALKELFEFRPRSKSQ | 157 |
FFAS is supported by the NIH grant R01-GM087218-01
|
|
|
Selected papers from Godzik Lab Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9. Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018. Lukasz Jaroszewski, Zhanwen Li, S. Sri Krishna, Constantina Bakolitsa, John Wooley, Ashley M. Deacon, Ian A. Wilson, Adam Godzik, Exploration of Uncharted Regions of the Protein Universe. Plos Biology. 2009 Sep. 7(9):e1000205 |