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Query: gi|16082698|ref|NP_395144.1| hypothetical protein (YPCD1.07) [Yersinia pestis CO92], from Y.pestis

Results of FFAS03 search in H.sapiens
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
    .   10    .   20    .   30    .   40    .   50    .   60    .   70    .   80    .   90    .
# Score Template Links and tools%idFirst MDKNKGIVFPPFSINIANIFVPDLSGANRFLACSLLEFLTYLSSVLLLMLWKILNIYIYGLMQHSRNQNIIAKRYIVYTVLFILKTANIRANPVTLSPLast
1 -12.800sp|Q9H5I5|PIEZ2_HUMAN(removed signalp:1-24) Protein PIEZO2 OS=Homo sapiens GN=FAM38B PE=2 SV=2  ali   20  96..........................ARSEMVCYFVIILNHMVSASMITLLLPILIFLWAMLSVPRPSRRFWMMAIVYTEVAIV.............. 153
2 -11.800sp|Q92508|PIEZ1_HUMAN Protein PIEZO1 OS=Homo sapiens GN=FAM38A PE=1 SV=4  ali   15  35..........................AHSELLCYFIIILNHMVTASAGSLVLPVLVFLWAMLSIPRPSKRFWMTAIVFTEIAVV.............. 92
3 -11.600sp|Q92508|PIEZ1_HUMAN Protein PIEZO1 OS=Homo sapiens GN=FAM38A PE=1 SV=4  ali   15  185..........................AHSELLCYFIIILNHMVTASAGSLVLPVLVFLWAMLSIPRPSKRFWMTAIVFTEIAVV.............. 242
4 -11.400sp|Q9H5I5|PIEZ2_HUMAN(removed signalp:1-24) Protein PIEZO2 OS=Homo sapiens GN=FAM38B PE=2 SV=2  ali   20  246..........................ARSEMVCYFVIILNHMVSASMITLLLPILIFLWAMLSVPRPSRRFWMMAIVYTEV................. 300
5 -8.820sp|Q8NAR6|CR058_HUMAN(removed signalp:1-17) Uncharacterized protein C18orf58 OS=Homo sapiens GN=C18orf58 PE=2 SV=1  ali follow..  18  78.....GKVVVTILLGSSGMMLPSLTSSVYFFV--FLGLCTWWSWLAIFTAGHLIGLYLYQFFQEAVPPNDYYARLFGIKSVIQTDCSSTWANPILL.. 196
6 -8.510sp|Q9H5I5|PIEZ2_HUMAN(removed signalp:1-24) Protein PIEZO2 OS=Homo sapiens GN=FAM38B PE=2 SV=2  ali   18  49.....GKVVVTILLGSSGMMLPSLTSSVYFFV--FLGLCTWWSWLAIFTAGHLIGLYLYQFFQEAVPPNDYYARLFGIKSVIQTDCSSTWANPILL.. 167
7 -8.180sp|Q9Y5Y9|SCNAA_HUMAN Sodium channel protein type 10 subunit alpha OS=Homo sapiens GN=SCN10A PE=1 SV=2  ali   17  242............................RKTCYRIVEHSWFESFIIFMILLSSGSLAFYYLDQKPTVKALLEYTDRVFTFIFVFE............. 300
8 -8.050sp|Q16821|PPR3A_HUMAN Protein phosphatase 1 regulatory subunit 3A OS=Homo sapiens GN=PPP1R3A PE=1 SV=3  ali   25  169.......................SKYTNSKIPYFLL-FLIFLITVYHYDLMIGLTFYVLSLSEEGRQKESVKKK........................ 222
9 -7.860sp|Q9P1Z9|CI174_HUMAN Uncharacterized protein C9orf174 OS=Homo sapiens GN=C9orf174 PE=1 SV=2  ali   18  26.......................GIGMKAFHNFNYFLFFYNVLLGLGACLSRLLISCLLGMWLIARIDRTIMQSFSAW--IGMLYMDHYHINPVLVS. 105
10 -7.830sp|Q15878|CAC1E_HUMAN Voltage-dependent R-type calcium channel subunit alpha-1E OS=Homo sapiens GN=CACNA1E PE=1 SV=3  ali   10  227............MVPHSSMFIFSTTNPIRRACHYIVNLRYFEMCILLVIAASSIALAAEDPVLTNSERNKVLRYFYVFTGVFTFE............. 300

FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Li W, Jaroszewski L, Godzik A. Clustering of highly homologous sequences to reduce the size of large protein databases. Bioinformatics. 2001 Mar;17(3):282-3.