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Query: gi|16082708|ref|NP_395154.1| Yop targeting protein (YPCD1.19c) [Yersinia pestis CO92], from Y.pestis

Results of FFAS03 search in H.sapiens
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MFIKDTYNMRALCTALEQSAPDTIINTSKEENNSYYCATAHLLRTDVCSLVNRVGIEPLKSGSILSTLEELWQAVGIVYRLYEWQHVSDIDTNFKKLPNNSDFGLVFSVLDCDIEYVFIGKKDSEGNIEFYDPKNSLLIENDDIKKYLYDEDFHRFCIMLIISKSELEELSRESCDQECIMGLast
1 -6.630sp|Q9H1M3|DB129_HUMAN(removed signalp:1-19) Beta-defensin 129 OS=Homo sapiens GN=DEFB129 PE=2 SV=1  ali follow..  50  6................................................................................................................................................................................RRCLMG 11
2 -6.560sp|O14924|RGS12_HUMAN Regulator of G-protein signaling 12 OS=Homo sapiens GN=RGS12 PE=1 SV=1  ali   13  4VCPDDRRFFGLVTMQTNDDGSLAQEEEGALRTSCVFMVDPDLFNHKIHGIARRFGFEPASSLPVLQFISVLYRDMG-GMRARAFLDGDADAHQNNSTSSNSDSGIGNFHQEEKSNRVLV............................................................... 140
3 -6.540sp|Q8NC38|CA213_HUMAN Putative uncharacterized protein C1orf213 OS=Homo sapiens GN=C1orf213 PE=2 SV=2  ali follow..  14  56............................................................................................................QEDSREHGQVPEVSDPQVDLEFVDLQAKPRYRRLILKTQIPEASDSQAAQKPQAHRPETTEAGRETTSN..... 126
4 -6.360sp|O14924|RGS12_HUMAN Regulator of G-protein signaling 12 OS=Homo sapiens GN=RGS12 PE=1 SV=1  ali   10  157...DDRRFFGLVTMQTNDDGSLAQEEEGALRTSCIHQGIARRFGFECTADPDTNGCLEFPASSLLQFISVLYRDMG-GMRARAFLDGDADAHQNNSTSSNSDSGIGNFHQEEKSNRVLVVDLGGSSSRH..................................................... 300
5 -5.460sp|P31629|ZEP2_HUMAN Transcription factor HIVEP2 OS=Homo sapiens GN=HIVEP2 PE=1 SV=2  ali   10  120.....SANAGSLQSLPGTVVPVRIQTHVPSYGSVMYTSISQILGQNSPAIVICKVDENMTQRTLVTNIAQVLGQHAGLEKYPIWKAPQTLPLGLESSIPLCLPSTSDSVATLGGSKRMLSPASS-----FMETKQQKRVKEEKMYGQIVEELSAVELTNSDIKKDLSRPQKPQLVRQGC... 300
6 -5.380sp|P33076|C2TA_HUMAN MHC class II transactivator OS=Homo sapiens GN=CIITA PE=1 SV=3  ali   67..VSGPQAFPKLVRILTAFSSLQHLDLDALSENKIGDEGVSQLSATFPQLKSLETLNLSQNNITDLGAYKLLLRLSLYNNCICDVGAESLARVLPDMVSLRVMDVQYNKFTAAGAQQLAASLRRCPHVETLAMWTPTIPFS......................................... 215
7 -5.330sp|Q96PQ0|SORC2_HUMAN VPS10 domain-containing receptor SorCS2 OS=Homo sapiens GN=SORCS2 PE=1 SV=3  ali   14  3....................................................................................STSVFVDGLLSEPGDETLVMTVFGHISFRSDWELVK----------VDFRPSRQCGEEDYSSWELSNLQGDRCIM-----GQQRSFRKRKSTSWCIKG 87
8 -5.160sp|Q86UP3|ZFHX4_HUMAN Zinc finger homeobox protein 4 OS=Homo sapiens GN=ZFHX4 PE=1 SV=1  ali   122.DVKIPDTLQDQLNEQQKRQPLSVSDRHVYKYRCNHCSLAF---KTMQKLQIHSQYHAIRAATMCNLCQRSFRTFQALKKHLEAGHPELSEAELQQLYASVNGELWAESETMSQDDHGLEQEMEREYEVDHEGKASPVGSDSSSIPDDMGSEPKRTLPFRKGPNFTMEKFLDPSRPYKCTV. 300
9 -5.150sp|Q8WY21|SORC1_HUMAN(removed signalp:1-33) VPS10 domain-containing receptor SorCS1 OS=Homo sapiens GN=SORCS1 PE=2 SV=3  ali   1.......................................................................................................GVLGEPGEETLIMTVFGHFSHRSELVKVDYKSDRRCAEEDYRPWQLHSQGEACIM------GAKRIYKKRKSERKCMQG 77
10 -5.090sp|A4D0S4|LAMB4_HUMAN(removed signalp:1-19) Laminin subunit beta-4 OS=Homo sapiens GN=LAMB4 PE=2 SV=1  ali   12  1...QDDCNRGACHPTTGDLLVGRNTQ-LMASSTCKYCILSYLEGEQKCFICDSRFPYDPYDQPNSHTIENVIVSFEPDREKKWWQSENGLDHVSIRLDLEALFRFSH---------LILTFKTFRPAAMLVE-RSTDYGHNWKVFKYFAKDCATSF.......................... 148

FFAS is supported by the NIH grant R01-GM087218-01
1 4 8 0 9 7   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Ye Y, Jaroszewski L, Li W, Godzik A. A segment alignment approach to protein comparison. Bioinformatics. 2003 Apr 12;19(6):742-9.