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Query: gi|16082710|ref|NP_395156.1| YopT chaperone (YPCD1.21) [Yersinia pestis CO92], from Y.pestis

Results of FFAS03 search in H.sapiens
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
    .   10    .   20    .   30    .   40    .   50    .   60    .   70    .   80    .   90    .  100    .  110    .  120    .  130
# Score Template Links and tools%idFirst MQTTFTELMQQLFLKLGLNHQVNENDVYTFTFEVDGHIQVLIACYHQQWVQLFSELGADLPTNDNLFGEHWPAHVQGRLDGKPILWSQQSLVGLDIDEMQAWLERFIDDIEQRKEPQNTKFQPNSTSPILFILast
1 -7.180sp|Q969R8|ITFG2_HUMAN Integrin-alpha FG-GAP repeat-containing protein 2 OS=Homo sapiens GN=ITFG2 PE=2 SV=1  ali follow..  11  306.............QLFALEKLDVTGNGHEEVVACAWDGQTYIIDHNRTVVRFQVDENIRAFCAGLY-GRNSPCLVYVTFNQKIYVYWEVQLERMESTNLVKLLETKPEYHSLLQELGVDPDDLPVTRALL.. 425
2 -6.160sp|P05023|AT1A1_HUMAN Sodium/potassium-transporting ATPase subunit alpha-1 OS=Homo sapiens GN=ATP1A1 PE=1 SV=1  ali   9  1LDDNFASIVTGV------------EEGRLIFDNLKKSIAYTLTSNIPEITPFLIPLGTVTILCIDLGTDMVPAISLAYEQAESDIMKRQP.......................................... 86
3 -6.120sp|Q8TEU7|RPGF6_HUMAN Rap guanine nucleotide exchange factor 6 OS=Homo sapiens GN=RAPGEF6 PE=1 SV=2  ali   14  169KDTTAKEVVFHAVHEFGLT--GASDTYSLCEVSVTPEGVIKQRRLPDQFSKLADRINGRYYLKNN---METETLCSDEDAQELVKESQLSMLQLSTIEVATQLS............................ 269
4 -5.970sp|P20916|MAG_HUMAN(removed signalp:1-19) Myelin-associated glycoprotein OS=Homo sapiens GN=MAG PE=1 SV=1  ali   9  5.......................................LTLRGQAQAPPRVICT-------ARNLYGAKSLELPFQGAHR--LMWAKIPVGAVVAFAILIAIVCYITQTRRKKNVTESPSFSAGDNPPVL. 88
5 -5.960sp|Q9Y4G8|RPGF2_HUMAN Rap guanine nucleotide exchange factor 2 OS=Homo sapiens GN=RAPGEF2 PE=1 SV=1  ali   13  176KDTTAKEVVIQAIREFAVT--ATPDQYSLCEVSVTPEGVIKQRRLPDQLSKLADRIQ----LSGRYYNMETETLCSDEDAQELLRESQISLLQLSTVEVATQLSMR.......................... 278
6 -5.830sp|Q8NE79|POPD1_HUMAN Blood vessel epicardial substance OS=Homo sapiens GN=BVES PE=1 SV=1  ali follow..  9  138PPDLFRRLTGQFCMIQTLKKGQTTSVDDRLSILLKGKMKVSYRGHFLHNIYPCAFIDSPEFRSTQMHKGEKFQVTIIADDNRFLCWSRERLTYFSEPFLYEIFRYLIDITNKLYSLNDPTLNDKKAKKL... 277
7 -5.640sp|O75185|AT2C2_HUMAN Calcium-transporting ATPase type 2C member 2 OS=Homo sapiens GN=ATP2C2 PE=1 SV=2  ali   17  7.....................................................SPLNAMQILWINIIMDGPPAQSLGVEPVDKDAFRQPPRSVRDTILSRALILKILMSA...................... 63
8 -5.420sp|P50993|AT1A2_HUMAN Sodium/potassium-transporting ATPase subunit alpha-2 OS=Homo sapiens GN=ATP1A2 PE=1 SV=1  ali   9  1...NFASIVTGV------------EEGRLIFDNLKKSIAYTLTSNIPEITPFLLPLGTVTILCIDLGTDMVPAISLAYEAAESDIMKRQP.......................................... 83
9 -5.400sp|O14576|DC1I1_HUMAN Cytoplasmic dynein 1 intermediate chain 1 OS=Homo sapiens GN=DYNC1I1 PE=1 SV=2  ali   7  91.....................SPVHPALFACVDGMGRLDLWNLNNDTEVPTASVAIEGASALNRVRWAQAGKEVAVGDSEGRIWVYDVGELAVPHNDEWTRFARTLVEIRANRADSEEEGTVE......... 192
10 -5.380sp|Q01814|AT2B2_HUMAN Plasma membrane calcium-transporting ATPase 2 OS=Homo sapiens GN=ATP2B2 PE=1 SV=2  ali   10  3.....................................................SPLKAVQMLWVNLIMDTFASLALATEPPTETLLLRKPYGRNKPLISRTMMKNILGHA...................... 59
FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Grynberg M, Godzik A. NERD: a DNA processing-related domain present in the anthrax virulence plasmid, pXO1. Trends Biochem Sci. 2004 Mar;29(3):106-10.