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Query: gi|40548796|ref|NP_395146.2| hypothetical protein (YPCD1.09c) [Yersinia pestis CO92], from Y.pestis

Results of FFAS03 search in H.sapiens
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
    .   10    .   20    .   30    .   40    .   50    .   60    .   70    .   80
# Score Template Links and tools%idFirst MAHVTSVTLGEHLTGFVGEMIQSGRYGNISEVLRDALRLMEAREQRVQHVRDMVLAGTNVPVSHRLMDEIFSAAVKDTSVLast
1 -7.560sp|Q9P2E3|ZNFX1_HUMAN NFX1-type zinc finger-containing protein 1 OS=Homo sapiens GN=ZNFX1 PE=1 SV=2  ali   22  184..RTMPIEVHLDERPFLRPNIISGKYDSTAIYLDTHFRLL--REDFVRPLREGILELLQS.................... 244
2 -6.970sp|Q9P2E3|ZNFX1_HUMAN NFX1-type zinc finger-containing protein 1 OS=Homo sapiens GN=ZNFX1 PE=1 SV=2  ali   25  44.......EVHLDERPFLRPNIISGKYDSTAIYLDTHFRLL--REDFVRPLREGILELLQS.................... 94
3 -6.250sp|Q9H246|CA021_HUMAN Uncharacterized protein C1orf21 OS=Homo sapiens GN=C1orf21 PE=1 SV=1  ali follow..  28  89.....NMHISESQQEFLDEKIEKGRYCSEEEDI............................................... 120
4 -6.240sp|Q08345|DDR1_HUMAN(removed signalp:1-20) Epithelial discoidin domain-containing receptor 1 OS=Homo sapiens GN=DDR1 PE=1 SV=1  ali   28  11.ARAVSVPLGGRVARFLQCRF-AGPWLLFSEIS............................................... 43
5 -6.080sp|Q8N4P2|TT30B_HUMAN Tetratricopeptide repeat protein 30B OS=Homo sapiens GN=TTC30B PE=2 SV=2  ali   18  1MAGLSGAQIPDEFTAVVYRLIRNARYAEAVQLLGGELQRSPRSRAGLSLL.............................. 51
6 -5.960sp|Q8IYF1|ELOA2_HUMAN RNA polymerase II transcription factor SIII subunit A2 OS=Homo sapiens GN=TCEB3B PE=1 SV=2  ali   22  1.............................NKTWREQLRLPDAPEQRLRVMTTNIRSARGNNPNGREAKMICFKSVAK... 49
7 -5.870sp|P54259|ATN1_HUMAN Atrophin-1 OS=Homo sapiens GN=ATN1 PE=1 SV=3  ali   16  1...NHPFYVPLGVDPGLLGYNVPALYSSDPA------AREREREARERDLRDRLKPGFEVKPSE................ 56
8 -5.790sp|Q8TDJ6|DMXL2_HUMAN DmX-like protein 2 OS=Homo sapiens GN=DMXL2 PE=1 SV=2  ali   20  136AAHVLSPTLPQYHPTQLLELMDLGKVRRAKAILSHLVKCIAGEVA................................... 180
9 -5.680sp|Q9Y485|DMXL1_HUMAN DmX-like protein 1 OS=Homo sapiens GN=DMXL1 PE=1 SV=3  ali   18  114AAHVLSPTLPQYHPLQLLELMDLGKVRRAKAILSHLVKCIAGEVVALN................................ 161
10 -5.570sp|Q9NQW6|ANLN_HUMAN Actin-binding protein anillin OS=Homo sapiens GN=ANLN PE=1 SV=2  ali   15  257................IQERLFKQDTSSSTTHLAQQLK--QERQKELACLRGRFDKG....................... 295
FFAS is supported by the NIH grant R01-GM087218-01
1 4 3 9 1 0   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Grynberg M, Godzik A. NERD: a DNA processing-related domain present in the anthrax virulence plasmid, pXO1. Trends Biochem Sci. 2004 Mar;29(3):106-10.