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Query: gi|16082692|ref|NP_395138.1| putative transposase (YPCD1.01) [Yersinia pestis CO92], from Y.pestis

Results of FFAS03 search in NEW_HUMAN_DOMAINS
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MVTFETVMEIKILHKQGMSSRAIARELGISRNTVKRYLQAKSEPPKYTPRPAVASLLDEYRDYIRQRIADAHPYKIPATVIAREIRDQGYRGGMTILRAFIRSLSVPQEQEPAVRFETEPGRQMQVDWGTMRNGRSPLHVFVAVLGYSRMLYIEFTDNMRYDTLETCHRNAFRFFGGVPREVLYDNMKTVVLQRDAYQTGQHRFHPSLWQFGKEMGFSPRLCRPFRAQTKGKVERMVQYTRNSFYIPLMTRLRPMGITVDVETANRHGLRWLHDVANQRKHETIQARPCDRWLEEQQSMLALPPEKKEYDVHLDENLVNFDKHPLHHPLSIYDSFCRGVALast
1 -7.390sp|Q9BWC9|CC106_HUMAN Coiled-coil domain-containing protein 106 OS=Homo sapiens GN=CCDC106 PE=1 SV=1  ali   15  3...LCRYKKILGTFQKLKSMSRAFEHHRVDRNTVALTIVAPEKLAEVGEFDPSKERLLEYSRRCFLALDDETLKKVQALKKSKLL............................................................................................................................................................................................................................................................... 91
2 -6.630sp|Q6P988|NOTUM_HUMAN Protein notum homolog OS=Homo sapiens GN=NOTUM PE=2 SV=2  ali   17  36.FTGQEMNVAQFLMHMGFDMQTVAQPQGLEPSELLGMLSNGS.......................................................................................................................................................................................................................................................................................................... 76
3 -5.250sp|P0C866|F91A2_HUMAN Putative protein FAM91A2 OS=Homo sapiens GN=FAM91A2 PE=5 SV=1  ali   10  1..............................................................................................................................................................KHIAFLFDSTLTAFLMMGNLS-----PVQSTGEREAQRYFEHALTLRNTTLFLRHNKDLVVQTAQPDQPNYGFPLD----LLRCESLLGLRVLNKNYTLLVSMAPLTNEIRPWFKQYI---VYHITGQGPPSLLLSKGTRPRKLPDIFQSYDRLHDPGVVPTSNVLTMLNDALTHSAVLIQE 202
4 -4.910sp|Q96MC2|CC164_HUMAN Coiled-coil domain-containing protein 164 OS=Homo sapiens GN=CCDC164 PE=2 SV=2  ali   12  10..................................................................................................................................................................................................................................PSSKQNLWDALYTALEKYHLVLTQRAKLLLENSSLEQQNTELQALLQQYLNSKINSELQVPPTQVLRVPTK........................................... 80
5 -4.840sp|Q96JI7|SPTCS_HUMAN Spatacsin OS=Homo sapiens GN=SPG11 PE=1 SV=3  ali   10  4......................................................................................................................................................................................VSQDLDVAVIVSSSNSAVALNLNLYFRQHPGHLLCERILEDLPIQGPKGVDEDDPVNSAYNMKLAKFSFQIDRSWKAQLSSLNETIKNWFQDILHLESPESGNHSTS------VQSWAFIP..................................... 128
6 -4.210sp|Q8IYL2|TRM44_HUMAN Probable tRNA (uracil-O(2)-)-methyltransferase OS=Homo sapiens GN=METTL19 PE=2 SV=2  ali   11  45................................................................................................................................................................LRTVIPKTSPHCPLTTPRREIVVQDVLNGTITEGNLKVKMSNVYQIQLSHSKEEWFISVLIFCPERWHSDGIVYPKPTWLGEELLAKLAKWSVENKKSDFKSTLS........................................................................... 157
7 -4.130sp|P78363|ABCA4_HUMAN Retinal-specific ATP-binding cassette transporter OS=Homo sapiens GN=ABCA4 PE=1 SV=3  ali   10  8................................................................................................................................................LTLHPWIYTFFSMDEPGSEQFTVLADVLLNKPGFGNRCLKEGWLPEYPCGNSTPWKTPSVSPNITQLFQKQKWTQVSCRCSTREKLTMLPEC---EGAGGLPPPQRTQRSTEILQDLTDRN--ISDFLVKTYPASSLKSKFWVNEQRYPVVPITGEALVGFLSDLGRIMNVSGGPITREASEIP............ 208
8 -4.110sp|Q9Y4F3|LKAP_HUMAN Limkain-b1 OS=Homo sapiens GN=LKAP PE=1 SV=5  ali   16  1...................................................................................................................................................................................................................................................................................TEQELLRLTDDSPVDLLCAPVPSCLPSPQLRPDPVILQSADLIQFEER................. 48
9 -4.090tr|C9K0R2|C9K0R2_HUMAN Uncharacterized protein OS=Homo sapiens GN=TMTC4 PE=4 SV=1  ali   12  43...................................................................................................................................................................LVVGSVAIVCFARSYDGDFVFDDSEAIVNNK.................................................................................................................................................. 73
10 -3.860sp|Q96QE3|ATAD5_HUMAN ATPase family AAA domain-containing protein 5 OS=Homo sapiens GN=ATAD5 PE=1 SV=4  ali   14  2......................................................................................................................................................................................................................................GCAETLF---------GLKNIFSPSEDLFSF--LKHKITMKEEWHKFIQLLTEFQMRNVDFLYSNLEFILPLPVDTIPETKNFCGPSV...................... 78

FFAS is supported by the NIH grant R01-GM087218-01
1 4 7 6 1 7   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Jaroszewski L, Rychlewski L, Zhang B, Godzik A. Fold prediction by a hierarchy of sequence, threading, and modeling methods. Protein Sci. 1998 Jun;7(6):1431-40.