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Query: gi|16082716|ref|NP_395162.1| secreted effector protein (YPCD1.28c) [Yersinia pestis CO92], from Y.pestis

Results of FFAS03 search in NEW_HUMAN_DOMAINS
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MTINIKTDSPIITTGSQLDAITTETVKQSGEIKKTEDTRHEAQAIKSSEASLSRSQVPELIKPSQGINVALLSKSQGDLNGTLSILLLLLELARKAREMGLQQRDIENKATITAQKEQVAEMVSGAKLMIAMAVVSGIMAATSTVASAFSIAKEVKIVKQEQILNSNIAGREQLIDTKMQQMSNIGDKAVSREDIGRIWKPEQVADQNKLALLDKEFRMTDSKANAFNAATQPLGQMANSAIQVHQGYSQAEVKEKEVNASIAANEKQKAEEAMNYNDNFMKDVLRLIEQYVSSHTHAMKAAFGVVLast
1 -6.550sp|Q7Z3U7|MON2_HUMAN Protein MON2 homolog OS=Homo sapiens GN=MON2 PE=1 SV=2  ali   9  7.....................................................................................LCLYAKLGELCVDPRPAVRKSAGQTLFSTIGAHGTLLQHSTWHTVIWKVLFHLLD...................................................................................................................................................................... 61
2 -6.230sp|O00507|USP9Y_HUMAN Probable ubiquitin carboxyl-terminal hydrolase FAF-Y OS=Homo sapiens GN=USP9Y PE=1 SV=2  ali   11  93...............................................................................GDYFTLLRHLLNYAYNGNINIPNAEVL-LVSEIDWLKRIRDNVKNTGETGVEEPILEGHLGVTKELLAFQTSEKKYH...................................................................................................................................................... 168
3 -6.210sp|Q93008|USP9X_HUMAN Probable ubiquitin carboxyl-terminal hydrolase FAF-X OS=Homo sapiens GN=USP9X PE=1 SV=3  ali   13  92...............................................................................GDYFTLLRHLLNYAYNSNINVPNAEVL-LNNEIDWLKRIRDDVKRTGETGIEETILEGHLGVTKELLAFQTSEKKFH...................................................................................................................................................... 167
4 -5.780sp|Q9UPU5|UBP24_HUMAN Ubiquitin carboxyl-terminal hydrolase 24 OS=Homo sapiens GN=USP24 PE=1 SV=3  ali   13  111........................................................................GVNQRLLSQCMEYFDLRCQLLDDLTTSEMEQLRISPATMLEDEITWLDNFEPNRTAECETSLLAGHLRLIKTLLSLCGAEKEM....................................................................................................................................................... 198
5 -5.090sp|Q14CX7|NAA25_HUMAN N-alpha-acetyltransferase 25, NatB auxiliary subunit OS=Homo sapiens GN=NAA25 PE=1 SV=1  ali   5  31...........................................................................................................................................................................................................................................QCQISSFYLVNDIYELDTSGLEDTMEIQERIENSFKSLLDQLKDVFSKCKGDLLEVKDGNLKTHPTLLENL 101
6 -4.630sp|Q86VV8|RTTN_HUMAN Rotatin OS=Homo sapiens GN=RTTN PE=1 SV=3  ali   17  1.........................................................................................................MVLAGLIRKLGHQLAEIRERALKSILCKIEHNLIC...................................................................................................................................................................... 35
7 -4.430tr|E9PPP7|E9PPP7_HUMAN Uncharacterized protein OS=Homo sapiens GN=C8orf73 PE=4 SV=1  ali   12  1..........................................................................................................................................................................................................................................GVLADLALYTAACLEEAGFAGTQATVLTLSS-EARGERLEDQVHALVRGLLAQVPSLAEG--RPWRAALRVL 71
8 -4.430sp|Q8IUC6|TCAM1_HUMAN TIR domain-containing adapter molecule 1 OS=Homo sapiens GN=TICAM1 PE=1 SV=1  ali   10  90...............................................................................PDVSWAVARLYHLLAEEKLCPASLRDVAYQEAVRTLSSRLGELQDEARNRCGWDIAG.......................................................................................................................................................................... 150
9 -4.410sp|A6NGR9|CH073_HUMAN Putative uncharacterized protein C8orf73 OS=Homo sapiens GN=C8orf73 PE=2 SV=2  ali   12  1..........................................................................................................................................................................................................................................GVLADLALYTAACLEEAGFAGTQATVLTLSSAEARGERLEDQVHALVRGLLAQVPSLAEG--RPWRAALRVL 71
10 -4.400tr|F5H0Q3|F5H0Q3_HUMAN Uncharacterized protein OS=Homo sapiens GN=MEFV PE=4 SV=1  ali   9  1...........................................................................................................................................................................................................................................RVQRKLEQVYYFLEQQEHFFVASLEDVGQMVGQIRKAYDTRVSQDIALLDALIGELEAKECQSEWELLQDI 71
FFAS is supported by the NIH grant R01-GM087218-01
1 4 7 7 0 1   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Lesley SA, Kuhn P, Godzik A., Deacon AM, Mathews I, Kreusch A, Spraggon G, Klock HE, McMullan D, Shin T, Vincent J, Robb A, Brinen LS, Miller MD, McPhillips TM, Miller MA, Scheibe D, Canaves JM, Guda C, Jaroszewski L, Selby TL, Elsliger MA, Wooley J, Taylor SS, Hodgson KO, Wilson IA, Schultz PG, Stevens RC. Structural genomics of the Thermotoga maritima proteome implemented in a high-throughput structure determination pipeline. Proc Natl Acad Sci U S A. 2002 Sep 3;99(18):11664-9. Epub 2002 Aug 22.