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Query: gi|16082708|ref|NP_395154.1| Yop targeting protein (YPCD1.19c) [Yersinia pestis CO92], from Y.pestis

Results of FFAS03 search in PfamA32U
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MFIKDTYNMRALCTALEQSAPDTIINTSKEENNSYYCATAHLLRTDVCSLVNRVGIEPLKSGSILSTLEELWQAVGIVYRLYEWQHVSDIDTNFKKLPNNSDFGLVFSVLDCDIEYVFIGKKDSEGNIEFYDPKNSLLIENDDIKKYLYDEDFHRFCIMLIISKSELEELSRESCDQECIMGLast
1 -20.000PF15644.6; R4M122_9ACTN/808-932; Papain fold toxin 1, glutamine deamidase  ali follow..  15  1................................NCQDCVLSFLHGRPRVSAPRTFDAYSDGDPQRPIGPERVERTTGGRLQSLC-RALSDVSTQLINGGHGSFAFLMSAWEGGSAH--AWAAVNHNGEILFVDPQSGR............................................. 125
2 -11.200PF12385.8; E1VLS9_9GAMM/65-219; Papain-like cysteine protease AvrRpt2  ali follow..  10  19..............................SMACWATVFTMLKSMTIEQATASVDLYRADTGLSGDDKVNFISTAGLVAEPPQSYSIQGWETLLRNYGPIWVTTDEAPGKAWAIHARIITGIYGDGTFKIVDPAGGR............................................. 141
3 -10.400PF05543.13; SSPP_STAA8/215-388; Staphopain peptidase C47  ali follow..  11  1......YNEQYINKLENFKIRETQGNNG-----CAGYTMSELLNYHAEAVMRFLGQRFQFTGLTPREMIYFGQTQGRSPQL--LNRMTTYNEVDNLTKNNKGIAVLGSRVESAGHAMAVKLDNGQEVIIIWN.................................................. 141
4 -9.440PF18021.1; A0A0C3Q319_9HOMO/149-241; Agglutinin C-terminal  ali follow..  9  4..............................................................LPYELRKSIWEGTALQRQNVRKHVISWGRDRLLVDEFSILFGVVYGNARTGPKAYNWYLSSGMHDLMFFDAQTGQ............................................. 92
5 -8.100PF03412.15; Q48872_LACSK/4-142; Peptidase C39 family  ali follow..  11  10..............................EMDCGVAALAMILKASLAYLRNEAKTDL--EGTTALGLVKTAENLGFETKAIQADMSLFEVADLP--------FIAHVLKNGELLHYYVVLGIKKDAIIIADPDPTVGIAKMTQSQFKSEWTGVALFIAPKPS................... 139
6 -8.040PF05379.11; RDRP_PVMR/991-1078; Carlavirus endopeptidase  ali follow..  17  1..............................RNGCVIESVAQALGTRNADILAVVE-VQAGLGLNLHHVEIVLQCFDIVGHC-------NLGDKEITLNAGGKMPFCFDISDE...................................................................... 84
7 -7.860PF14399.6; D1A2G4_THECD/14-142; Butirosin biosynthesis protein H, N-terminal  ali follow..  12  1................................HCETTALGVLLGLDLSEPMNLDFPFLGGRVKPFELTKNLAARLGLELAVHETSSPRKAWENVASAIDAGRPVGLQPKVHFAGHIVAMYGYDDR-TAYLVD.................................................. 128
8 -7.640PF05611.11; A0A2H2IEN3_CAEJA/1-70; Caenorhabditis elegans protein of unknown function (DUF780 topsan)  ali follow..  10  6.........................................................................................................AYMSAGGYSSGYMGSNASSSGYAR--DYASGGSGSSGGNQS---------------GGGGAGGQVFKARTDQSCYLG 70
9 -7.150PF18022.1; A0A0C2WFZ8_9HOMO/318-415; Ricin-type beta-trefoil lectin C-terminal domain  ali follow..  13  10..............................................................CPQEVIDTVWRNQGLQFAFQMKGAMCDWVQDNLRAPVGLLFGVMFENNNGEKHAYNWSLNQDLTAVTFFEPQNG.............................................. 97
10 -7.100PF05023.14; B7FPQ4_PHATC/5-223; Phytochelatin synthase  ali follow..  9  15.SKNGRLIFSSALASKGLKSFFPLMEQYSTQSEPAYCGIS-----TLVIALNAFAIDPRQKGVTLKAFSCLAVCQGIQASVYYTEEERVSENHFRETGLRDVVVVSYTRKTGTGHSPIAAFDSVSDSVLILD.................................................. 183
FFAS is supported by the NIH grant R01-GM087218-01
1 4 5 2 0 5   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Grynberg M, Jaroszewski L, Godzik A. Domain analysis of the tubulin cofactor system: a model for tubulin folding and dimerization. BMC Bioinformatics. 2003 Oct 10;4(1):46.