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current user: public |
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Query: gi|16082708|ref|NP_395154.1| Yop targeting protein (YPCD1.19c) [Yersinia pestis CO92], from Y.pestis |
. 10 . 20 . 30 . 40 . 50 . 60 . 70 . 80 . 90 . 100 . 110 . 120 . 130 . 140 . 150 . 160 . 170 . 180 | |||||||
# | Score | Template | Links and tools | %id | First | MFIKDTYNMRALCTALEQSAPDTIINTSKEENNSYYCATAHLLRTDVCSLVNRVGIEPLKSGSILSTLEELWQAVGIVYRLYEWQHVSDIDTNFKKLPNNSDFGLVFSVLDCDIEYVFIGKKDSEGNIEFYDPKNSLLIENDDIKKYLYDEDFHRFCIMLIISKSELEELSRESCDQECIMG | Last |
1 | -20.000 | PF15644.6; R4M122_9ACTN/808-932; Papain fold toxin 1, glutamine deamidase | ali follow.. | 15 | 1 | ................................NCQDCVLSFLHGRPRVSAPRTFDAYSDGDPQRPIGPERVERTTGGRLQSLC-RALSDVSTQLINGGHGSFAFLMSAWEGGSAH--AWAAVNHNGEILFVDPQSGR............................................. | 125 |
2 | -11.200 | PF12385.8; E1VLS9_9GAMM/65-219; Papain-like cysteine protease AvrRpt2 | ali follow.. | 10 | 19 | ..............................SMACWATVFTMLKSMTIEQATASVDLYRADTGLSGDDKVNFISTAGLVAEPPQSYSIQGWETLLRNYGPIWVTTDEAPGKAWAIHARIITGIYGDGTFKIVDPAGGR............................................. | 141 |
3 | -10.400 | PF05543.13; SSPP_STAA8/215-388; Staphopain peptidase C47 | ali follow.. | 11 | 1 | ......YNEQYINKLENFKIRETQGNNG-----CAGYTMSELLNYHAEAVMRFLGQRFQFTGLTPREMIYFGQTQGRSPQL--LNRMTTYNEVDNLTKNNKGIAVLGSRVESAGHAMAVKLDNGQEVIIIWN.................................................. | 141 |
4 | -9.440 | PF18021.1; A0A0C3Q319_9HOMO/149-241; Agglutinin C-terminal | ali follow.. | 9 | 4 | ..............................................................LPYELRKSIWEGTALQRQNVRKHVISWGRDRLLVDEFSILFGVVYGNARTGPKAYNWYLSSGMHDLMFFDAQTGQ............................................. | 92 |
5 | -8.100 | PF03412.15; Q48872_LACSK/4-142; Peptidase C39 family | ali follow.. | 11 | 10 | ..............................EMDCGVAALAMILKASLAYLRNEAKTDL--EGTTALGLVKTAENLGFETKAIQADMSLFEVADLP--------FIAHVLKNGELLHYYVVLGIKKDAIIIADPDPTVGIAKMTQSQFKSEWTGVALFIAPKPS................... | 139 |
6 | -8.040 | PF05379.11; RDRP_PVMR/991-1078; Carlavirus endopeptidase | ali follow.. | 17 | 1 | ..............................RNGCVIESVAQALGTRNADILAVVE-VQAGLGLNLHHVEIVLQCFDIVGHC-------NLGDKEITLNAGGKMPFCFDISDE...................................................................... | 84 |
7 | -7.860 | PF14399.6; D1A2G4_THECD/14-142; Butirosin biosynthesis protein H, N-terminal | ali follow.. | 12 | 1 | ................................HCETTALGVLLGLDLSEPMNLDFPFLGGRVKPFELTKNLAARLGLELAVHETSSPRKAWENVASAIDAGRPVGLQPKVHFAGHIVAMYGYDDR-TAYLVD.................................................. | 128 |
8 | -7.640 | PF05611.11; A0A2H2IEN3_CAEJA/1-70; Caenorhabditis elegans protein of unknown function (DUF780 topsan) | ali follow.. | 10 | 6 | .........................................................................................................AYMSAGGYSSGYMGSNASSSGYAR--DYASGGSGSSGGNQS---------------GGGGAGGQVFKARTDQSCYLG | 70 |
9 | -7.150 | PF18022.1; A0A0C2WFZ8_9HOMO/318-415; Ricin-type beta-trefoil lectin C-terminal domain | ali follow.. | 13 | 10 | ..............................................................CPQEVIDTVWRNQGLQFAFQMKGAMCDWVQDNLRAPVGLLFGVMFENNNGEKHAYNWSLNQDLTAVTFFEPQNG.............................................. | 97 |
10 | -7.100 | PF05023.14; B7FPQ4_PHATC/5-223; Phytochelatin synthase | ali follow.. | 9 | 15 | .SKNGRLIFSSALASKGLKSFFPLMEQYSTQSEPAYCGIS-----TLVIALNAFAIDPRQKGVTLKAFSCLAVCQGIQASVYYTEEERVSENHFRETGLRDVVVVSYTRKTGTGHSPIAAFDSVSDSVLILD.................................................. | 183 |
FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9. Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018. Igarashi Y, Eroshkin A, Gramatikova S, Gramatikoff K, Zhang Y, Smith JW,Osterman AL, Godzik A. CutDB: a proteolytic event database. Nucleic Acids Res. 2007 Jan;35(Database issue):D546-9. Epub 2006 Nov 16. |