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Query: gi|16082708|ref|NP_395154.1| Yop targeting protein (YPCD1.19c) [Yersinia pestis CO92], from Y.pestis

Results of FFAS03 search in VFDB
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MFIKDTYNMRALCTALEQSAPDTIINTSKEENNSYYCATAHLLRTDVCSLVNRVGIEPLKSGSILSTLEELWQAVGIVYRLYEWQHVSDIDTNFKKLPNNSDFGLVFSVLDCDIEYVFIGKKDSEGNIEFYDPKNSLLIENDDIKKYLYDEDFHRFCIMLIISKSELEELSRESCDQECIMGLast
1 -9.900[R] COG3271 Predicted double-glycine peptidase  ali follow..  15  62..............................NYSCGASCFQAVVSGQFIELVNTTLGETDRKGTTPSGIVEGAEKMGLRAEIRENLTLDDLRDSINK---GIPVIVRLQEMNASSHYMVVIGIDSK-NVYFEDPWILGSRGYIPHDEFV.................................. 193
2 -9.510[S] COG4744 Uncharacterized conserved protein  ali follow..  11  20.........................NPMTGVANLFDVAVALVMSYHLPELLSANEDITIVKNPGKQDMKIVIKDEGQPIEVLNMTDDIGG-------GTGEALGTAYRLADGRVIYVPEEENSSSTYQQMLD.................................................. 127
3 -7.350[S] COG3738 Uncharacterized protein conserved in bacteria  ali follow..  73................................VCSDVVIRALRKVDLQKLVHEKRPDSNIDHRRVPNLETWFSRHDKT---------RPTSKNPSDYQAGD---VSWRLDNGLAHIGVVSDGFARDGTPLVIHNIGAGAQEEDVLFNWRMVGHYRY.......................... 202
4 -6.080[KE] COG3060 Transcriptional regulator of met regulon  ali follow..  17  33...........VLKILTDERTRRQVNNLRHATNSELLCEAFLHAFTGQPLPDDADLRKERSDEIPEAAKEIMRELGIDPETWEY.................................................................................................. 105
5 -5.930[P] KOG0632 Phytochelatin synthase  ali follow..  10  18FASFEGKQINEALQKGTMEGFFGLISYFQTQSEPAFCGLA-----SLSMVLNSLSIDPGRKGISFGKVVCLAHSSGAKVEAFRTNTIDDFRKYVVKCSDNCHMISTYHRQTGTGHSPIGGYNAERDMALILDVAR............................................... 182
6 -5.850[S] KOG4621 Uncharacterized conserved protein  ali follow..  10  101..............................NWDCGLSCIIMILSQLLGNFDAVCGEEGFGSSTWTIDLCYLLMRYQVRHEYFTQTRTVDMEVILRHLARHGPVILLTNKFGYAGHYVVLCGYDMAAQKLFYHNPEVHDGHICRCLIESMDTARRAY-----GTDEDIIFIYEKKETRE.... 303
7 -5.550[R] KOG4366 Predicted thioesterase  ali follow..  48....DTTTVNGLCLTNDVDTLLYHMNNARYFRELDFARVDFYERTNLYRTITGMGGSVFQGAATIRYRRFIFHRFNIISRIIYWDEQS-MEHRFVRPSDKFVHCIAICRMEAVMSELLPRTSSNGFRATVLTSLAAPSPAAGGISNPAMDTSLAENGHGTTSGGAAGTGATASATAAHCL.. 233
8 -5.460[J] COG0621 2-methylthioadenine synthetase  ali follow..  156............................GCSKYCSFCVVPYTRGRPLNDVLTEIANLAQQGVKEINLLGQNVNAYRGEMDDGEICDFATLLRIVHEIPGIERMRFTTSHPREFTDSIIECYRDLPKLVSHLHIQSGSDRVLSAMKRGYTALEYKSIIRKLRAIRPDL------CLSSDFIVG 309
9 -5.230[O] COG0695 Glutaredoxin and related proteins  ali follow..  12  9..............................KETCPYCHRA----------------------------KALLSSKGVSFQELPIDGNAAKREEMIKRSGRTTVPQIFIDAQHIGGCDDLYALDARGGLDPL................................................... 81
10 -5.180[S] COG2043 Uncharacterized protein conserved in archaea  ali follow..  1MDVNEIRENAKKLMELKEEIPEGYETLDEEKRHCEMIQMARLERKKLYATVDKHLCKGGAYAMGVFRNPPEPLATGKLYVKLGNFKDEEAAKKTVDA-EEEIYATVYAPLDETDF-SIVFIGEPLYALRLVQAILYHKGGRFQADFSGIQSLCADAVAAVYTRKAP-SRKYAGIKPEEVVVA 209

FFAS is supported by the NIH grant R01-GM087218-01
1 4 7 5 1 6   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Lukasz Jaroszewski, Zhanwen Li, S. Sri Krishna, Constantina Bakolitsa, John Wooley, Ashley M. Deacon, Ian A. Wilson, Adam Godzik, Exploration of Uncharted Regions of the Protein Universe. Plos Biology. 2009 Sep. 7(9):e1000205