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Query: gi|16082708|ref|NP_395154.1| Yop targeting protein (YPCD1.19c) [Yersinia pestis CO92], from Y.pestis |
. 10 . 20 . 30 . 40 . 50 . 60 . 70 . 80 . 90 . 100 . 110 . 120 . 130 . 140 . 150 . 160 . 170 . 180 | |||||||
# | Score | Template | Links and tools | %id | First | MFIKDTYNMRALCTALEQSAPDTIINTSKEENNSYYCATAHLLRTDVCSLVNRVGIEPLKSGSILSTLEELWQAVGIVYRLYEWQHVSDIDTNFKKLPNNSDFGLVFSVLDCDIEYVFIGKKDSEGNIEFYDPKNSLLIENDDIKKYLYDEDFHRFCIMLIISKSELEELSRESCDQECIMG | Last |
1 | -9.900 | [R] COG3271 Predicted double-glycine peptidase | ali follow.. | 15 | 62 | ..............................NYSCGASCFQAVVSGQFIELVNTTLGETDRKGTTPSGIVEGAEKMGLRAEIRENLTLDDLRDSINK---GIPVIVRLQEMNASSHYMVVIGIDSK-NVYFEDPWILGSRGYIPHDEFV.................................. | 193 |
2 | -9.510 | [S] COG4744 Uncharacterized conserved protein | ali follow.. | 11 | 20 | .........................NPMTGVANLFDVAVALVMSYHLPELLSANEDITIVKNPGKQDMKIVIKDEGQPIEVLNMTDDIGG-------GTGEALGTAYRLADGRVIYVPEEENSSSTYQQMLD.................................................. | 127 |
3 | -7.350 | [S] COG3738 Uncharacterized protein conserved in bacteria | ali follow.. | 7 | 73 | ................................VCSDVVIRALRKVDLQKLVHEKRPDSNIDHRRVPNLETWFSRHDKT---------RPTSKNPSDYQAGD---VSWRLDNGLAHIGVVSDGFARDGTPLVIHNIGAGAQEEDVLFNWRMVGHYRY.......................... | 202 |
4 | -6.080 | [KE] COG3060 Transcriptional regulator of met regulon | ali follow.. | 17 | 33 | ...........VLKILTDERTRRQVNNLRHATNSELLCEAFLHAFTGQPLPDDADLRKERSDEIPEAAKEIMRELGIDPETWEY.................................................................................................. | 105 |
5 | -5.930 | [P] KOG0632 Phytochelatin synthase | ali follow.. | 10 | 18 | FASFEGKQINEALQKGTMEGFFGLISYFQTQSEPAFCGLA-----SLSMVLNSLSIDPGRKGISFGKVVCLAHSSGAKVEAFRTNTIDDFRKYVVKCSDNCHMISTYHRQTGTGHSPIGGYNAERDMALILDVAR............................................... | 182 |
6 | -5.850 | [S] KOG4621 Uncharacterized conserved protein | ali follow.. | 10 | 101 | ..............................NWDCGLSCIIMILSQLLGNFDAVCGEEGFGSSTWTIDLCYLLMRYQVRHEYFTQTRTVDMEVILRHLARHGPVILLTNKFGYAGHYVVLCGYDMAAQKLFYHNPEVHDGHICRCLIESMDTARRAY-----GTDEDIIFIYEKKETRE.... | 303 |
7 | -5.550 | [R] KOG4366 Predicted thioesterase | ali follow.. | 9 | 48 | ....DTTTVNGLCLTNDVDTLLYHMNNARYFRELDFARVDFYERTNLYRTITGMGGSVFQGAATIRYRRFIFHRFNIISRIIYWDEQS-MEHRFVRPSDKFVHCIAICRMEAVMSELLPRTSSNGFRATVLTSLAAPSPAAGGISNPAMDTSLAENGHGTTSGGAAGTGATASATAAHCL.. | 233 |
8 | -5.460 | [J] COG0621 2-methylthioadenine synthetase | ali follow.. | 7 | 156 | ............................GCSKYCSFCVVPYTRGRPLNDVLTEIANLAQQGVKEINLLGQNVNAYRGEMDDGEICDFATLLRIVHEIPGIERMRFTTSHPREFTDSIIECYRDLPKLVSHLHIQSGSDRVLSAMKRGYTALEYKSIIRKLRAIRPDL------CLSSDFIVG | 309 |
9 | -5.230 | [O] COG0695 Glutaredoxin and related proteins | ali follow.. | 12 | 9 | ..............................KETCPYCHRA----------------------------KALLSSKGVSFQELPIDGNAAKREEMIKRSGRTTVPQIFIDAQHIGGCDDLYALDARGGLDPL................................................... | 81 |
10 | -5.180 | [S] COG2043 Uncharacterized protein conserved in archaea | ali follow.. | 8 | 1 | MDVNEIRENAKKLMELKEEIPEGYETLDEEKRHCEMIQMARLERKKLYATVDKHLCKGGAYAMGVFRNPPEPLATGKLYVKLGNFKDEEAAKKTVDA-EEEIYATVYAPLDETDF-SIVFIGEPLYALRLVQAILYHKGGRFQADFSGIQSLCADAVAAVYTRKAP-SRKYAGIKPEEVVVA | 209 |
FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9. Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018. Lukasz Jaroszewski, Zhanwen Li, S. Sri Krishna, Constantina Bakolitsa, John Wooley, Ashley M. Deacon, Ian A. Wilson, Adam Godzik, Exploration of Uncharted Regions of the Protein Universe. Plos Biology. 2009 Sep. 7(9):e1000205 |