FFAS03 results for 16082711

Query: gi|16082711|ref|NP_395157.1| hypothetical protein (YPCD1.22c) [Yersinia pestis CO92], from Y.pestis

Results of FFAS03 search in VFDB
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.

						`. 10 . 20 . 30 . 40 . 50 . 60 . 70 . 80 . 90 . 100 . 110 . 120 .`
#	Score	Template	Links and tools	%id	First	`MQHPVSFPSFSFHDNSIFCNKPIVGTMNINADHEKNLKVSIIYKIQLIGGITEILNGGVINWGIFNLVGYFKSSISLIKIIIIDNTNLVMLYVKIWINNENFLIYSELKTNELLYKPYLLNLIDIIVTM`	Last
1	-6.660	`[T] KOG1882 Transcriptional regulator SNIP1, contains FHA domain`	`ali follow..`	19	264	`FKNDEVLPVMYIHRQSAYLLGRHRRIADIPIDHPSCSKQHAVFQYRLVEYTRADGTVGRRVKPY---------------IIDLGSGN-------TFLNNKRI--YYELKEKDVL-REYVL.........`	369
2	-5.890	`[K] KOG4134 DNA-dependent RNA polymerase I`	`ali follow..`	8	47	`........CLVAGPHQRHIALSPRYLNRKRTGIREQLDAELLRYSESLLGVP----------------------IAYDNIKVVGELGDIY--------DDQGHIHLNIEADFVIFCPEPGQKLMGIVNK`	137
3	-5.390	`[T] COG3642 Mn2+-dependent serine/threonine protein kinase`	`ali follow..`	19	31	`...............................................................ARLISEARRAGVPTPIIYDIEEFKLKMQFIEVGRLHSSGIVHGDLTTSNLLLAGERLYLIDF....`	111
4	-5.370	`[S] KOG1181 FOG: Low-complexity`	`ali follow..`	14	5	`...........................KIYLNHSKHIMPQVVTNEAQMLIKNEIEEELLGLPPATTVPPDFVIDEGMQPVVVLERLSSPLLRSSS--NSDRVSARNYLKRVDQLLK----NTINTLVSI`	111
5	-5.180	`[S] COG4014 Uncharacterized protein conserved in archaea`	`ali follow..`	19	15	`........................................................ESMADAEEITAVGRNKKPILVGNAVKYVNSDTVSRVSEIKKDEEG--VWVLLESTDLWYREETLEYTD.....`	81
6	-5.000	`[S] KOG4610 Uncharacterized conserved protein`	`ali follow..`	18	150	`...............................................................................TTLIEQFLMLILIVGRWLLPKGDLTRDQLSQLLLVYIGTAADIIEFFDSY`	199
7	-4.900	`[KL] KOG4086 Transcriptional regulator SOH1`	`ali follow..`	20	16	`.......................................................................RFEIELEFVQMLSNPWYLFLAQHKYFEDEAFLQYREPEYVKFIIYPTCLHMLTLL...`	78
8	-4.900	`[R] COG5088 Rad5p-binding protein`	`ali follow..`	20	16	`.......................................................................RFEIELEFVQMLSNPWYLFLAQHKYFEDEAFLQYREPEYVKFIIYPTCLHMLTLL...`	78
9	-4.830	`[S] COG4984 Predicted membrane protein`	`ali follow..`	19	568	`........................................................................ETLACISLLLL-SVSRVLFALALLGVIMNLSYYYYLLSIPLLHKSFLLMGVGIVLAL`	626
10	-4.810	`[P] COG3303 Formate-dependent nitrite reductase, periplasmic cytochrome c552 subunit`	`ali follow..`	19	1	`........................................................................................MKIYLRVWI---NFLLNLFITTNGVIIVNAFKKSLIVAASF`	44

FFAS is supported by the NIH grant R01-GM087218-01

jobs submitted since Jan 1, 2011

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