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current user: public |
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Query: gi|16082716|ref|NP_395162.1| secreted effector protein (YPCD1.28c) [Yersinia pestis CO92], from Y.pestis |
. 10 . 20 . 30 . 40 . 50 . 60 . 70 . 80 . 90 . 100 . 110 . 120 . 130 . 140 . 150 . 160 . 170 . 180 . 190 . 200 . 210 . 220 . 230 . 240 . 250 . 260 . 270 . 280 . 290 . 300 . | |||||||
# | Score | Template | Links and tools | %id | First | MTINIKTDSPIITTGSQLDAITTETVKQSGEIKKTEDTRHEAQAIKSSEASLSRSQVPELIKPSQGINVALLSKSQGDLNGTLSILLLLLELARKAREMGLQQRDIENKATITAQKEQVAEMVSGAKLMIAMAVVSGIMAATSTVASAFSIAKEVKIVKQEQILNSNIAGREQLIDTKMQQMSNIGDKAVSREDIGRIWKPEQVADQNKLALLDKEFRMTDSKANAFNAATQPLGQMANSAIQVHQGYSQAEVKEKEVNASIAANEKQKAEEAMNYNDNFMKDVLRLIEQYVSSHTHAMKAAFGVV | Last |
1 | -11.500 | [S] COG5613 Uncharacterized conserved protein | ali follow.. | 11 | 108 | ..................................................................................IELGKLVSNLEEVRKDIKIAKKIEENQEKIKETEENAKQVKKSGILSAIASVIVGAIMVASGVGAVAGAMMGGSALKCLANIGAKLGANTASLVAKGAEFSAKVAQISTGISNTVGSAVTKLGGSFAGLTMSHAIRTGSQATQVAVGVGSGITQTINNKKQADLQHNNADLALNKADMAALQSIIDRLKEELSHLSESHQQVMELIFQMINAKGDMLHNLAG.. | 396 |
2 | -6.250 | [S] COG1511 Predicted membrane protein | ali follow.. | 9 | 150 | ...........................................................................................IDKLKASVSKEVTEQYTKVIFDNFKDIAKGLSDASS---AKKIDDGTKDAKNGSAQLKENLAKLKESTATISTAQLADGAAQVTSGIQSLDSSLGKFQDSSNQIYDKSSQLAAGSGELTSKMNELLAGLQNVQKGTPNLTNGLDQLNSKVQEGSEKAAKAEKIINALDLTKLETAVNNLEKSETAMKEFKKQLTDFENSLKNRDQAFKNVI.... | 360 |
3 | -6.160 | [S] COG2268 Uncharacterized protein conserved in bacteria | ali follow.. | 13 | 250 | ..........................................................................................AFMTLEQEQQVKTRTAEQNAKIAAFEAERHREAEQTRILAERQIQETEIEVRSRKVEAEREVRIKEIEQQQVTEIANQTKSIAIAAKSEQQSQAEARANDALADAVRAQQNVETTRQTAEADRAKQVALIAAAQDAETKAVELTVR-AKAEKEAAELQAAAIIELAEATRKKGLAEAEAQRALNDAINKFKLALLQSLPAVIEKSVEPMKSI.... | 473 |
4 | -6.040 | [U] KOG3838 Mannose lectin ERGIC-53, involved in glycoprotein traffic | ali follow.. | 7 | 237 | ........................................................................SAATGGLADDHDVFHFTTSLHAAGQVQEQPKVENQEKLTQEYKEYQDKLEKQKQEYKKDHPDEHKDEEDWEEFYESENQRELRQIWQGQSQIADHLRELSRKVDEIIGRQETTLSLVSRNAGQALPPPAAGGVPQQQLPVGAVSRSDVDLLLTNQNMLLSSIREIRQLVGDINVRTDNIQTNQKHAPTAQIQSTGYDVQTLIAEMRDGMNQVKQGITHVGQRLAAPQGA..... | 466 |
5 | -5.930 | [R] COG4980 Gas vesicle protein | ali follow.. | 6 | 2 | ............................................................................................................................ASGRSLLTGLFVGG--IIGGAAVLLTAPSSGKQLREKMK-------------------------------------------------------------TNYDSFEETIKRLKSDGLALKDQLIKAAKESTDVIKDVGGELQTSIKKWQEEIKPHQQDLQKEIADIEEKIRQLEKTL.... | 116 |
6 | -5.720 | [T] KOG3725 SH3 domain protein SH3GLB | ali follow.. | 10 | 11 | ...................................................................................DAGGFFSRAKQLTEETFLKAERTELDSHFENLLQRADKTEDHTRR-----LLSAIEGYLQPNPTVRMEEVFYEKLELKKDGAIRQNNLEQLSTAMTEAGEQFGETTPYGSALLKVAQTENRLGQAEREFLEGDMKTIQKERKVLNSKRLDLDACKSRLKKAKTVDLQTVTNSKTSGGFTIEQAEADVRVAQAEFDKQSEITKLLLEGIQTAHNNQLKCLRDFV | 243 |
7 | -5.680 | [U] KOG0946 ER-Golgi vesicle-tethering protein p115 | ali follow.. | 10 | 734 | ............................................................................................RLREEIEELKRNQELLQSQLTEKDSMIENMKS---------------SQTSGTNEQSSAIVSARDSEQVAELKQELATLKSQLNSQSVEITKLQTEKQELLQKTEAFAKSVEVQGETETIIATKTTDVEGRLSALLQETKELKNEIKA-LSEERTAIKEQLDSSNSTIAILQTEKDKLELEITDSKKEQDDLLVLLADQDQKILSLKNKL.... | 927 |
8 | -5.620 | [V] KOG1962 B-cell receptor-associated protein and related proteins | ali follow.. | 9 | 59 | ....................................................................................LVIFLLEAIREMRKYSGLQQSNEVHLNVEM-QHSMKLFRAQRNFYISG-VIRRLVNLICTQANLMAQSEASF---------KQAQSATAAARSLLENKNTEKAKEAGEDTTLIELNKLRERVQELTSDLNREKKDKEAVKSQAESINREYDRLTEEYSKLQKKITIGGGGNKD................................................. | 227 |
9 | -5.560 | [S] COG3105 Uncharacterized protein conserved in bacteria | ali follow.. | 11 | 18 | .........................................................................................................................................................................................................................................IGAVAMRFGNRKLRQQQALQYELEKNKAELDEYREELVSHFARSAELLDTMAHDYRQLYQHMAKSSSSLL... | 87 |
10 | -5.370 | [S] KOG2678 Predicted membrane protein | ali follow.. | 9 | 7 | ..................................................................................VNIRTLLANCEELAKSEQNFWR---LQKFIKSLDTMLAELEAMGDPQSVKRI------------GYLERLQALKISTGYADVPGSTTKTPSQSSAVSETGENALKEIRQLQNSKYHNELRKELLQDSDALRRRRGADESSSSSGSANVQETSGENMNQAAKYYTNAQEKITEHMLSLTRNLKEQTETANRIIRRDTEVVSRSAGMADRNINSLGKEAEKL.... | 212 |
FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9. Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018. Friedberg I, Nika K, Tautz L, Saito K, Cerignoli F, Friedberg I, Godzik A, Mustelin T. Identification and characterization of DUSP27, a novel dual-specific protein phosphatase. FEBS Lett. 2007 May 29;581(13):2527-33. Epub 2007 Apr 30. |